Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCBP4

Gene Name Gene ID Reads Annotation
PCBP4 ENSGALG00000027695 7937 poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]











Genes with expression patterns similar to PCBP4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCBP4 ENSGALG00000027695 7937 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
2. TBCA ENSGALG00000004353 18510 1.84 - - - - 0.949 - 0.891 - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
3. ADD3 ENSGALG00000008542 13814 1.827 - - - - 0.941 - 0.886 - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
4. MKI67 ENSGALG00000025996 28136 1.807 - - - - 0.967 - 0.840 - - - marker of proliferation Ki-67, transcript variant X3
5. SH2D3C ENSGALG00000005036 5101 1.754 - - - - 0.956 - - 0.798 - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
6. COIL ENSGALG00000003158 7806 1.743 - - - - 0.968 - - 0.775 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
7. IGDCC4 ENSGALG00000007410 5457 1.731 - - 0.776 - 0.955 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
8. NFASC ENSGALG00000031776 4264 1.719 - - - - 0.967 - 0.752 - - - neurofascin [Source:NCBI gene;Acc:419824]
9. FH ENSGALG00000013165 13669 1.709 - - - - 0.969 - 0.740 - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
10. MRPS27 ENSGALG00000015002 6541 1.706 - - 0.736 - 0.970 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
11. POLR2B ENSGALG00000011387 4864 1.694 - - - - 0.967 - - 0.727 - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
12. STK3 ENSGALG00000032850 6339 1.691 - - - - 0.968 - - 0.723 - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
13. TMEM165 ENSGALG00000027886 5468 1.685 - - - - 0.969 - - 0.716 - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
14. DESI2 ENSGALG00000010678 4590 1.651 - - - - - - 0.876 0.775 - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
15. NUDC ENSGALG00000000895 17844 1.645 - - - - 0.761 - 0.884 - - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
16. GBAS 18453 1.642 - - 0.706 - 0.936 - - - - - glioblastoma amplified sequence
17. XPC ENSGALG00000006357 2484 1.627 - - 0.788 - - - 0.839 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
18. ATP5A1 ATP5A1 32367 1.611 - - - - 0.842 - - 0.769 - -
19. COMMD3 ENSGALG00000007900 8629 1.61 - - - - - - 0.882 0.728 - - COMM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23332]
20. DDX18 ENSGALG00000012147 12463 1.605 - - 0.817 - 0.788 - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
21. ACTL6A ENSGALG00000009061 13013 1.593 - - 0.732 - - - 0.861 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
22. UTP18 ENSGALG00000002985 7129 1.593 - - - - - - 0.865 0.728 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
23. EMC3 ENSGALG00000003738 10363 1.591 - - - - - - 0.867 0.724 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
24. DPY30 ENSGALG00000010621 6818 1.591 - - - - - - 0.876 0.715 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
25. TMEM128 ENSGALG00000014992 6567 1.586 - - 0.750 - - - 0.836 - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
26. DNMT3A ENSGALG00000041454 9607 1.573 - - - - - - 0.793 0.780 - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]
27. TMED5 27507 1.57 - - 0.778 - - - 0.792 - - - transmembrane p24 trafficking protein 5
28. SUCO ENSGALG00000003081 4116 1.55 - - - - - - 0.834 0.716 - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
29. NELL2 ENSGALG00000009601 4243 1.548 - - - - - - 0.841 0.707 - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
30. DHCR7 ENSGALG00000004106 4731 1.541 - - 0.708 - - - 0.833 - - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
31. PEMT ENSGALG00000004875 4094 1.526 - - - - - - 0.798 0.728 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
32. CHCHD4 ENSGALG00000006328 5860 1.525 - - - - - - 0.822 0.703 - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
33. CDK5RAP2 ENSGALG00000041102 4042 1.524 - - - - - - 0.823 0.701 - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
34. DSCR3 3583 1.514 - - 0.776 - - - - 0.738 - - DSCR3 arrestin fold containing, transcript variant X1
35. RIT1 ENSGALG00000014647 7174 1.511 - - 0.754 - - - - 0.757 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
36. CCDC43 ENSGALG00000001022 5462 1.509 - - - - - - 0.808 0.701 - - coiled-coil domain containing 43 [Source:NCBI gene;Acc:419971]
37. TRIP11 ENSGALG00000010763 3146 1.508 - - 0.772 - - - 0.736 - - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
38. NCBP2_1 ENSGALG00000006843 7170 1.495 - - - - - - 0.793 0.702 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
39. PPA1 ENSGALG00000004442 33355 1.49 - - - - 0.703 - 0.787 - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
40. DLG3 ENSGALG00000041900 3016 1.471 - - 0.721 - - - - 0.750 - - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
41. IPO11 ENSGALG00000014740 4922 1.462 - - - - - - 0.728 0.734 - - importin 11 [Source:HGNC Symbol;Acc:HGNC:20628]
42. TBPL1 ENSGALG00000013981 3710 1.419 - - 0.711 - - - - 0.708 - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
43. WDR82 ENSGALG00000025904 4783 0.974 - - - - 0.974 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
44. CBWD1 ENSGALG00000010147 2765 0.973 - - - - 0.973 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
45. MRPS25 ENSGALG00000008506 12131 0.973 - - - - 0.973 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
46. CSNK1G1 ENSGALG00000030812 31618 0.973 - - - - 0.973 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
47. ATG5 ENSGALG00000015387 7752 0.972 - - - - 0.972 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
48. TCP11L1 ENSGALG00000011688 2427 0.972 - - - - 0.972 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
49. TRAPPC12 ENSGALG00000016387 2593 0.972 - - - - 0.972 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
50. COMMD8 ENSGALG00000026279 13509 0.971 - - - - 0.971 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
51. ZBTB10 ENSGALG00000034376 3271 0.971 - - - - 0.971 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
52. PSPC1 ENSGALG00000017142 13036 0.971 - - - - 0.971 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
53. IGBP1 ENSGALG00000044628 9200 0.971 - - - - 0.971 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
54. SIRT1 ENSGALG00000002761 9028 0.971 - - - - 0.971 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
55. DNAJC12 ENSGALG00000002769 1418 0.97 - - - - 0.970 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
56. ELL2 ENSGALG00000014678 1111 0.97 - - - - 0.970 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
57. RABEP1 ENSGALG00000001737 2650 0.97 - - - - 0.970 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
58. REST 2394 0.97 - - - - 0.970 - - - - - RE1 silencing transcription factor
59. XPO7 ENSGALG00000001838 1875 0.969 - - - - 0.969 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
60. MRPL23 ENSGALG00000006561 13737 0.969 - - - - 0.969 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
61. CTSZ ENSGALG00000007462 630 0.969 - - - - 0.969 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
62. ENSGALG00000011687 ENSGALG00000011687 4553 0.969 - - - - 0.969 - - - - -
63. PUM1 ENSGALG00000042598 9392 0.969 - - - - 0.969 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
64. TLK2 ENSGALG00000000410 4690 0.969 - - - - 0.969 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
65. EAPP ENSGALG00000010007 5080 0.969 - - - - 0.969 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
66. SAR1B ENSGALG00000038753 6493 0.968 - - - - 0.968 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
67. SSPN ENSGALG00000014042 638 0.968 - - - - 0.968 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
68. SSR2 ENSGALG00000000764 32190 0.968 - - - - 0.968 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
69. NAP1L1 ENSGALG00000010238 14506 0.968 - - - - 0.968 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
70. IGF1R ENSGALG00000040651 772 0.968 - - - - 0.968 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
71. TLCD1 ENSGALG00000003973 17569 0.968 - - - - 0.968 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
72. CZH9ORF41 CZH9ORF41 3492 0.968 - - - - 0.968 - - - - -
73. DDX55 ENSGALG00000003298 2315 0.968 - - - - 0.968 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
74. KNOP1 ENSGALG00000002042 6251 0.967 - - - - 0.967 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
75. SHROOM2 ENSGALG00000030802 4517 0.967 - - - - 0.967 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
76. LATS2 4776 0.966 - - - - 0.966 - - - - - large tumor suppressor kinase 2
77. FERMT2 ENSGALG00000012425 5480 0.965 - - - - 0.965 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
78. CDC42SE2 ENSGALG00000027258 4725 0.965 - - - - 0.965 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
79. SFSWAP ENSGALG00000002487 9977 0.965 - - - - 0.965 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
80. AATF ENSGALG00000005420 6501 0.964 - - - - 0.964 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
81. FBXO9 ENSGALG00000016320 9600 0.964 - - - - 0.964 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
82. REEP5 ENSGALG00000023157 6282 0.964 - - - - 0.964 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
83. ENSGALG00000014852 ENSGALG00000014852 15288 0.963 - - - - 0.963 - - - - -
84. BAG4 ENSGALG00000003254 5751 0.962 - - - - 0.962 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
85. STRAP ENSGALG00000013092 13100 0.962 - - - - 0.962 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
86. KPNA3 ENSGALG00000017009 17330 0.962 - - - - 0.962 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
87. CCT4 ENSGALG00000008812 78267 0.961 - - - - 0.961 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
88. TK2 ENSGALG00000034216 5394 0.961 - - - - 0.961 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
89. YY1 ENSGALG00000017388 1933 0.96 - - - - 0.960 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
90. LARP1 ENSGALG00000040109 14808 0.96 - - - - 0.960 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
91. NOP58 ENSGALG00000008454 34630 0.959 - - - - 0.959 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
92. PLAA ENSGALG00000001782 5459 0.958 - - - - 0.958 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
93. POLR3F ENSGALG00000008749 5645 0.956 - - - - 0.956 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
94. RANGAP1 ENSGALG00000011966 20170 0.955 - - - - 0.955 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
95. PTPN12 9302 0.951 - - - - 0.951 - - - - - protein tyrosine phosphatase, non-receptor type 12
96. RPL24 ENSGALG00000015339 227460 0.95 - - - - 0.950 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
97. OLA1 ENSGALG00000009325 26414 0.949 - - - - 0.949 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
98. EXO1 ENSGALG00000010748 7572 0.949 - - - - 0.949 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
99. RCAN3 ENSGALG00000004282 7778 0.945 - - - - 0.945 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
100. SKP2 ENSGALG00000003547 14637 0.944 - - - - 0.944 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]

There are 703 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA