Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCBP3

Gene Name Gene ID Reads Annotation
PCBP3 ENSGALG00000004394 5 poly(rC) binding protein 3, transcript variant X32











Genes with expression patterns similar to PCBP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCBP3 ENSGALG00000004394 5 3 - - - 1.000 - 1.000 - 1.000 - - poly(rC) binding protein 3, transcript variant X32
2. KIAA1045 KIAA1045 23 1.952 - - - - - 0.954 - 0.998 - -
3. TMC5 ENSGALG00000006911 12 1.638 - - - 0.786 - - - 0.852 - - transmembrane channel like 5 [Source:HGNC Symbol;Acc:HGNC:22999]
4. KIAA2013 ENSGALG00000004533 8 1 - - - - - 1.000 - - - - KIAA2013 [Source:HGNC Symbol;Acc:HGNC:28513]
5. OMG ENSGALG00000005594 3 1 - - - - - 1.000 - - - - oligodendrocyte myelin glycoprotein [Source:HGNC Symbol;Acc:HGNC:8135]
6. ENSGALG00000022892 ENSGALG00000022892 3 1 - - - - - 1.000 - - - -
7. FOXN3 ENSGALG00000010665 18 1 - - - 1.000 - - - - - - forkhead box N3 [Source:HGNC Symbol;Acc:HGNC:1928]
8. ENSGALG00000002590 ENSGALG00000002590 13 1 - - - 1.000 - - - - - -
9. MYO5C ENSGALG00000033198 36 1 - - - - - 1.000 - - - - myosin VC [Source:HGNC Symbol;Acc:HGNC:7604]
10. TSGA10 ENSGALG00000016757 4 1 - - - - - 1.000 - - - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
11. ARL15 ENSGALG00000014911 13 1 - - - - - - - 1.000 - - ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
12. ENSGALG00000027565 ENSGALG00000027565 2 1 - - - - - 1.000 - - - -
13. PCGF2 ENSGALG00000018815 38 1 - - - - - 1.000 - - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
14. CASP10 ENSGALG00000046494 2 1 - - - - - 1.000 - - - - caspase 10 [Source:HGNC Symbol;Acc:HGNC:1500]
15. B3GALT1 ENSGALG00000010931 6 1 - - - - - 1.000 - - - - beta-1,3-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:916]
16. OIP5 ENSGALG00000008579 27 1 - - - - - - - 1.000 - - Opa interacting protein 5 [Source:NCBI gene;Acc:423212]
17. RGS13 ENSGALG00000026810 8 1 - - - - - 1.000 - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
18. PARM1 ENSGALG00000010268 13 1 - - - - - 1.000 - - - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
19. C2orf50 ENSGALG00000046449 17 1 - - - - - - - 1.000 - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
20. PROZ ENSGALG00000016832 6 1 - - - - - 1.000 - - - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
21. ITK ENSGALG00000003857 1 1 - - - - - 1.000 - - - - IL2 inducible T cell kinase [Source:HGNC Symbol;Acc:HGNC:6171]
22. ENSGALG00000019491 ENSGALG00000019491 1 1 - - - - - 1.000 - - - -
23. MATK ENSGALG00000000736 4 1 - - - - - 1.000 - - - - megakaryocyte-associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6906]
24. ENSGALG00000021716 ENSGALG00000021716 5 1 - - - - - 1.000 - - - -
25. UPF3A ENSGALG00000016815 48 1 - - - - - - - 1.000 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]
26. KIAA1024L ENSGALG00000027692 20 1 - - - - - 1.000 - - - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
27. DIRAS2 ENSGALG00000005323 11 0.998 - - - - - - - 0.998 - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
28. ENSGALG00000027427 ENSGALG00000027427 16 0.998 - - - - - - - 0.998 - -
29. PSD ENSGALG00000042551 6 0.998 - - - - - - - 0.998 - - pleckstrin and Sec7 domain containing [Source:HGNC Symbol;Acc:HGNC:9507]
30. ENSGALG00000016962 ENSGALG00000016962 6 0.998 - - - - - - - 0.998 - -
31. MAF ENSGALG00000026258 45 0.998 - - - - - - - 0.998 - - MAF bZIP transcription factor [Source:NCBI gene;Acc:693248]
32. SFMBT1 ENSGALG00000001753 10 0.998 - - - - - - - 0.998 - - Scm like with four mbt domains 1 [Source:HGNC Symbol;Acc:HGNC:20255]
33. GLTSCR1L 18 0.998 - - - - - - - 0.998 - - GLTSCR1 like, transcript variant X4
34. KCNRG ENSGALG00000017012 4 0.998 - - - - - - - 0.998 - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
35. ENSGALG00000028328 ENSGALG00000028328 23 0.998 - - - - - - - 0.998 - -
36. ENSGALG00000019568 ENSGALG00000019568 25 0.998 - - - - - - - 0.998 - -
37. DLL4 ENSGALG00000008514 3 0.998 - - - - - - - 0.998 - - delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
38. ENSGALG00000019077 ENSGALG00000019077 49 0.998 - - - - - - - 0.998 - -
39. MAL ENSGALG00000008552 4 0.99 - - - - - - - 0.990 - - mal, T cell differentiation protein [Source:NCBI gene;Acc:416707]
40. KLF4 ENSGALG00000026928 184 0.978 - - - - - 0.978 - - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
41. TMEM45BL ENSGALG00000024296 5 0.978 - - - - - 0.978 - - - - transmembrane protein 45B-like
42. PTPRF ENSGALG00000010053 27 0.975 - - - - - 0.975 - - - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
43. IL2RG ENSGALG00000005638 21 0.97 - - - - - - - 0.970 - - interleukin 2 receptor subunit gamma [Source:NCBI gene;Acc:395199]
44. ABHD10 ENSGALG00000015378 12 0.97 - - - - - 0.970 - - - - abhydrolase domain containing 10 [Source:HGNC Symbol;Acc:HGNC:25656]
45. GAK ENSGALG00000015352 99 0.97 - - - - - - - 0.970 - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
46. ENSGALG00000028962 ENSGALG00000028962 7 0.969 - - - - - 0.969 - - - -
47. SEC61A1 ENSGALG00000005966 9 0.968 - - - - - - - 0.968 - - Sec61 translocon alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:18276]
48. INTS6L ENSGALG00000006157 2303 0.967 - - - - - 0.967 - - - - integrator complex subunit 6 like, transcript variant X6
49. SENP7 ENSGALG00000044642 48 0.967 - - - - - 0.967 - - - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
50. RUNDC3B ENSGALG00000008954 924 0.959 - - - - - 0.959 - - - - RUN domain containing 3B [Source:NCBI gene;Acc:420535]
51. AKR AKR 68 0.959 - - - - - - - 0.959 - -
52. INSRR ENSGALG00000013253 54 0.957 - - - - - 0.957 - - - - insulin receptor related receptor [Source:HGNC Symbol;Acc:HGNC:6093]
53. C1QTNF6 ENSGALG00000027067 493 0.953 - - - - - 0.953 - - - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
54. TMPRSS7 ENSGALG00000015389 12 0.952 - - - - - - - 0.952 - - transmembrane serine protease 7 [Source:HGNC Symbol;Acc:HGNC:30846]
55. RBM20 ENSGALG00000008697 20 0.952 - - - - - - - 0.952 - - RNA binding motif protein 20 [Source:HGNC Symbol;Acc:HGNC:27424]
56. CNTF ENSGALG00000026207 47 0.946 - - - - - 0.946 - - - - ciliary neurotrophic factor [Source:NCBI gene;Acc:396488]
57. SLC7A11 ENSGALG00000009758 104 0.945 - - - - - - - 0.945 - - solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]
58. ENSGALG00000026155 ENSGALG00000026155 49 0.943 - - - - - 0.943 - - - -
59. DSL1 DSL1 113 0.941 - - - - - - - 0.941 - -
60. HAO1 ENSGALG00000008845 22 0.941 - - - - - - - 0.941 - - hydroxyacid oxidase 1 [Source:NCBI gene;Acc:416728]
61. MUSTN1 ENSGALG00000001709 713 0.936 - - - - - - - 0.936 - - musculoskeletal, embryonic nuclear protein 1 [Source:NCBI gene;Acc:404773]
62. TMEM207 ENSGALG00000026953 7 0.933 - - - - - 0.933 - - - - transmembrane protein 207 [Source:NCBI gene;Acc:424909]
63. ENSGALG00000028720 ENSGALG00000028720 10 0.933 - - - - - - - 0.933 - -
64. ATP13A2 ENSGALG00000003774 271 0.933 - - - - - 0.933 - - - - ATPase 13A2 [Source:NCBI gene;Acc:419466]
65. PLCXD3 ENSGALG00000014845 247 0.931 - - - - - - - 0.931 - - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
66. USP53 ENSGALG00000011990 12 0.927 - - - - - 0.927 - - - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
67. SH3YL1 ENSGALG00000016362 1723 0.927 - - - - - 0.927 - - - - SH3 and SYLF domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29546]
68. IL12RB1 28 0.925 - - - - - 0.925 - - - - interleukin 12 receptor subunit beta 1, transcript variant X4
69. CDH10 ENSGALG00000032022 37 0.923 - - - - - 0.923 - - - - cadherin 10 [Source:NCBI gene;Acc:408049]
70. LOC422147 ENSGALG00000004113 30 0.92 - - - - - 0.920 - - - - putative P2Y purinoceptor 10-like
71. HAVCR1 ENSGALG00000017362 25 0.92 - - - - - 0.920 - - - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
72. VSNL1 ENSGALG00000016464 19 0.92 - - - - - 0.920 - - - - visinin like 1 [Source:NCBI gene;Acc:396189]
73. C19orf44 C19orf44 24 0.917 - - - - - - - 0.917 - -
74. PRR15L ENSGALG00000046413 27 0.907 - - - - - 0.907 - - - - proline rich 15 like [Source:HGNC Symbol;Acc:HGNC:28149]
75. NFAT5 ENSGALG00000039300 29 0.903 - - - - - - - 0.903 - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
76. KSR1 ENSGALG00000005685 78 0.898 - - - - - 0.898 - - - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
77. AP3M1 ENSGALG00000005070 712 0.897 - - - - - - - 0.897 - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
78. SPRTN ENSGALG00000011065 24 0.895 - - - - - 0.895 - - - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]
79. FRMPD4 ENSGALG00000033541 163 0.888 - - - - - 0.888 - - - - FERM and PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:29007]
80. RPS6KA6 ENSGALG00000007097 94 0.885 - - - - - 0.885 - - - - ribosomal protein S6 kinase A6 [Source:HGNC Symbol;Acc:HGNC:10435]
81. FLRT2 ENSGALG00000010589 490 0.883 - - - - - 0.883 - - - - fibronectin leucine rich transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3761]
82. ZNF516 ENSGALG00000013660 34 0.873 - - - - - 0.873 - - - - zinc finger protein 516 [Source:HGNC Symbol;Acc:HGNC:28990]
83. FIGF FIGF 576 0.872 - - - - - - - 0.872 - -
84. NT5C1B ENSGALG00000016471 1378 0.871 - - - - - 0.871 - - - - 5'-nucleotidase, cytosolic IB
85. TRUB2 ENSGALG00000004920 5425 0.87 - - - - - 0.870 - - - - TruB pseudouridine synthase family member 2 [Source:HGNC Symbol;Acc:HGNC:17170]
86. C1orf222 C1orf222 61 0.868 - - - - - 0.868 - - - -
87. ZC3H12B ENSGALG00000039391 39 0.861 - - - - - - - 0.861 - - zinc finger CCCH-type containing 12B [Source:HGNC Symbol;Acc:HGNC:17407]
88. FREM1 ENSGALG00000005426 61 0.859 - - - - - 0.859 - - - - FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:HGNC:23399]
89. C11ORF61 C11ORF61 41 0.857 - - - - - 0.857 - - - -
90. MTR ENSGALG00000014464 90 0.856 - - - - - - - 0.856 - - 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:NCBI gene;Acc:422069]
91. LRRC41 ENSGALG00000010359 709 0.856 - - - - - 0.856 - - - - leucine rich repeat containing 41 [Source:HGNC Symbol;Acc:HGNC:16917]
92. LYRM5 LYRM5 1269 0.854 - - - - - 0.854 - - - -
93. TFPI ENSGALG00000002594 1395 0.85 - - - - - 0.850 - - - - tissue factor pathway inhibitor [Source:HGNC Symbol;Acc:HGNC:11760]
94. MYOM2 ENSGALG00000016342 62 0.847 - - - - - - - 0.847 - - myomesin 2 [Source:NCBI gene;Acc:396034]
95. PHOSPHO1 ENSGALG00000033683 22 0.846 - - - - - - - 0.846 - - phosphoethanolamine/phosphocholine phosphatase [Source:NCBI gene;Acc:395650]
96. LRRC43 LRRC43 16 0.844 - - - - - 0.844 - - - -
97. SPATA2 ENSGALG00000008026 2040 0.842 - - - - - 0.842 - - - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
98. BCL2 ENSGALG00000012885 45 0.839 - - - - - 0.839 - - - - BCL2, apoptosis regulator [Source:NCBI gene;Acc:396282]
99. NPY2R ENSGALG00000009280 29 0.839 - - - - - - - 0.839 - - neuropeptide Y receptor Y2 [Source:NCBI gene;Acc:422405]
100. NCOA3 ENSGALG00000004570 243 0.837 - - - - - - - 0.837 - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]

There are 127 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA