Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCBP2

Gene Name Gene ID Reads Annotation
PCBP2 ENSGALG00000013155, ENSGALG00000041030 15 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]











Genes with expression patterns similar to PCBP2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCBP2 ENSGALG00000013155, ENSGALG00000041030 15 2 - - 1.000 - - - - - - 1.000 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
2. SLC25A29 ENSGALG00000011220 17 1.504 - - 0.801 - - - - - - 0.703 solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
3. ENSGALG00000028936 ENSGALG00000028936 57 0.901 - - - - - - - - - 0.901
4. DRD4 ENSGALG00000040761 79 0.886 - - 0.886 - - - - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
5. ENSGALG00000027352 ENSGALG00000027352 69 0.883 - - 0.883 - - - - - - -
6. PNPLA2 ENSGALG00000014569 7 0.873 - - 0.873 - - - - - - - patatin like phospholipase domain containing 2 [Source:NCBI gene;Acc:431066]
7. ENSGALG00000028038 ENSGALG00000028038 9 0.873 - - 0.873 - - - - - - -
8. KLHL23 ENSGALG00000020737 13 0.864 - - 0.864 - - - - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
9. FBXO16 7 0.864 - - 0.864 - - - - - - - F-box protein 16, transcript variant X1
10. ASTL ENSGALG00000037220 2775 0.863 - - 0.863 - - - - - - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
11. EPHA10 ENSGALG00000001912 5 0.862 - - 0.862 - - - - - - - EPH receptor A10, transcript variant X1
12. ENSGALG00000020389 ENSGALG00000020389 5 0.862 - - 0.862 - - - - - - -
13. SLC6A18 ENSGALG00000013180 6 0.862 - - 0.862 - - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
14. GTPBP8 ENSGALG00000015190 21 0.855 - - 0.855 - - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
15. ENSGALG00000017269 ENSGALG00000017269 13 0.85 - - 0.850 - - - - - - -
16. GBP1 ENSGALG00000000720 55 0.848 - - 0.848 - - - - - - - guanylate binding protein 1
17. AGBL2 ENSGALG00000029618 8 0.846 - - 0.846 - - - - - - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
18. XYLB ENSGALG00000006173 23 0.845 - - 0.845 - - - - - - - xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
19. STARD9 65 0.839 - - 0.839 - - - - - - - StAR related lipid transfer domain containing 9, transcript variant X1
20. ENSGALG00000019568 ENSGALG00000019568 25 0.837 - - 0.837 - - - - - - -
21. MTMR3 ENSGALG00000008051 9 0.836 - - 0.836 - - - - - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
22. KANSL1L ENSGALG00000002866 44 0.834 - - 0.834 - - - - - - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
23. STAG3 STAG3 34 0.834 - - 0.834 - - - - - - -
24. PRLR ENSGALG00000003446 19 0.826 - - 0.826 - - - - - - - prolactin receptor [Source:NCBI gene;Acc:395660]
25. ENSGALG00000026461 ENSGALG00000026461 61 0.825 - - 0.825 - - - - - - -
26. TRPA1 ENSGALG00000034751 148 0.825 - - 0.825 - - - - - - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
27. GRAMD3 1685 0.825 - - 0.825 - - - - - - - GRAM domain containing 3, transcript variant X9
28. ZDHHC15 ENSGALG00000007800 24 0.823 - - 0.823 - - - - - - - zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
29. RGMB ENSGALG00000015284 14 0.821 - - 0.821 - - - - - - - repulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]
30. PDE1C ENSGALG00000039935 16 0.819 - - 0.819 - - - - - - - phosphodiesterase 1C [Source:HGNC Symbol;Acc:HGNC:8776]
31. MECR ENSGALG00000032763 110 0.818 - - 0.818 - - - - - - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
32. P2RY13 ENSGALG00000039432 16 0.815 - - - - - - - - - 0.815 purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
33. ADAMTS15 ENSGALG00000001407 11 0.815 - - 0.815 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
34. U11 U11 11 0.814 - - 0.814 - - - - - - -
35. GLB1L ENSGALG00000011328 223 0.813 - - 0.813 - - - - - - - galactosidase beta 1 like [Source:HGNC Symbol;Acc:HGNC:28129]
36. NUDT3 ENSGALG00000002830 7 0.812 - - - - - - - - - 0.812 nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
37. SNORA77 SNORA77 5 0.812 - - - - - - - - - 0.812
38. MST MST 9 0.812 - - - - - - - - - 0.812
39. WNT7A ENSGALG00000005123 2 0.812 - - - - - - - - - 0.812 Wnt family member 7A [Source:NCBI gene;Acc:374168]
40. RAB9B ENSGALG00000004918 2 0.812 - - - - - - - - - 0.812 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
41. DAPK1 ENSGALG00000012608 17 0.812 - - - - - - - - - 0.812 death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
42. LRRN3 ENSGALG00000009488 1 0.812 - - - - - - - - - 0.812 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
43. RBL2 ENSGALG00000003663 10 0.812 - - - - - - - - - 0.812 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
44. NT5E ENSGALG00000015833 5 0.812 - - - - - - - - - 0.812 5'-nucleotidase ecto
45. ENSGALG00000026496 ENSGALG00000026496 9 0.812 - - - - - - - - - 0.812
46. IFN-GAMMA IFN-GAMMA 1 0.812 - - - - - - - - - 0.812
47. POLR3G ENSGALG00000014650 7 0.812 - - - - - - - - - 0.812 RNA polymerase III subunit G, transcript variant X2
48. SNX13 ENSGALG00000010840 13 0.812 - - - - - - - - - 0.812 sorting nexin 13 [Source:NCBI gene;Acc:420598]
49. gga-mir-22 ENSGALG00000024507 2 0.812 - - - - - - - - - 0.812 gga-mir-22 [Source:miRBase;Acc:MI0006982]
50. GRAMD2 GRAMD2 3 0.812 - - - - - - - - - 0.812
51. TTC29 ENSGALG00000010009 4 0.812 - - - - - - - - - 0.812 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
52. EXOC6B ENSGALG00000016098 3 0.812 - - - - - - - - - 0.812 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
53. CAMTA1 ENSGALG00000039525 1 0.812 - - - - - - - - - 0.812 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
54. ACOT1L ENSGALG00000008752 6 0.812 - - - - - - - - - 0.812 acyl-CoA thioesterase 1-like
55. C8B ENSGALG00000010853 21 0.812 - - - - - - - - - 0.812 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
56. RUFY4 2 0.812 - - - - - - - - - 0.812 RUN and FYVE domain containing 4, transcript variant X5
57. RS1 ENSGALG00000016523 11 0.812 - - - - - - - - - 0.812 retinoschisin 1 [Source:NCBI gene;Acc:772315]
58. ESR2 ENSGALG00000011801 7 0.812 - - - - - - - - - 0.812 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
59. TRIM36 ENSGALG00000008188 1 0.812 - - - - - - - - - 0.812 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
60. ENSGALG00000004619 ENSGALG00000004619 3 0.812 - - - - - - - - - 0.812
61. FOSL2 ENSGALG00000010036 3 0.812 - - - - - - - - - 0.812 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]
62. ENSGALG00000024286 ENSGALG00000024286 2 0.812 - - - - - - - - - 0.812
63. C6orf58 ENSGALG00000045522 2 0.812 - - - - - - - - - 0.812 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
64. ENSGALG00000009487 ENSGALG00000009487 1 0.812 - - - - - - - - - 0.812
65. ID3 ENSGALG00000035317 52 0.811 - - 0.811 - - - - - - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
66. RNASET2 ENSGALG00000011426 40 0.811 - - 0.811 - - - - - - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
67. SLC26A11 ENSGALG00000007018 7 0.811 - - - - - - - - - 0.811 solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
68. BLVRA ENSGALG00000031786 23 0.81 - - 0.810 - - - - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
69. POF1B ENSGALG00000006919 7 0.809 - - - - - - - - - 0.809 POF1B, actin binding protein [Source:HGNC Symbol;Acc:HGNC:13711]
70. OGDHL ENSGALG00000002266 57 0.809 - - 0.809 - - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
71. DRP2 ENSGALG00000005031 1 0.809 - - - - - - - - - 0.809 dystrophin related protein 2 [Source:HGNC Symbol;Acc:HGNC:3032]
72. AKAP6 ENSGALG00000009995 77 0.807 - - 0.807 - - - - - - - A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
73. HERPUD1 ENSGALG00000001220 18 0.803 - - 0.803 - - - - - - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
74. SVOPL ENSGALG00000012812 27 0.802 - - 0.802 - - - - - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
75. NFXL1 ENSGALG00000014138 36 0.801 - - 0.801 - - - - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
76. NSUN6 ENSGALG00000008564 9 0.798 - - 0.798 - - - - - - - NOP2/Sun RNA methyltransferase family member 6 [Source:HGNC Symbol;Acc:HGNC:23529]
77. C20orf112 C20orf112 488 0.797 - - 0.797 - - - - - - -
78. CDH6 ENSGALG00000012917 17 0.797 - - - - - - - - - 0.797 cadherin 6 [Source:NCBI gene;Acc:414842]
79. PTGS2 ENSGALG00000033635 426 0.796 - - 0.796 - - - - - - - prostaglandin-endoperoxide synthase 2 [Source:NCBI gene;Acc:396451]
80. ADA ENSGALG00000004170 633 0.79 - - 0.790 - - - - - - - adenosine deaminase [Source:NCBI gene;Acc:419194]
81. RAF1 ENSGALG00000004998 327 0.788 - - 0.788 - - - - - - - Raf-1 proto-oncogene, serine/threonine kinase [Source:NCBI gene;Acc:396245]
82. SLITRK2 ENSGALG00000009192 51 0.786 - - 0.786 - - - - - - - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
83. SNORA40 SNORA40 12 0.784 - - - - - - - - - 0.784
84. ERRFI1 ENSGALG00000000535 83 0.781 - - 0.781 - - - - - - - ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
85. PLN ENSGALG00000027583 419 0.781 - - 0.781 - - - - - - - phospholamban [Source:NCBI gene;Acc:396378]
86. LRRN4 ENSGALG00000008815 481 0.78 - - 0.780 - - - - - - - leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
87. PRPF38A ENSGALG00000010627 2476 0.78 - - 0.780 - - - - - - - pre-mRNA processing factor 38A [Source:NCBI gene;Acc:771795]
88. GPCPD1 ENSGALG00000009130 24 0.776 - - 0.776 - - - - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
89. CCDC30 15 0.775 - - 0.775 - - - - - - - coiled-coil domain containing 30, transcript variant X4
90. WDHD1 ENSGALG00000012199 3570 0.774 - - 0.774 - - - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
91. VPS51 ENSGALG00000004166 204 0.774 - - 0.774 - - - - - - - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
92. TMEM161B ENSGALG00000010896 36 0.774 - - 0.774 - - - - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
93. MEI1 ENSGALG00000031186 61 0.769 - - 0.769 - - - - - - - meiotic double-stranded break formation protein 1 [Source:HGNC Symbol;Acc:HGNC:28613]
94. CHD2 ENSGALG00000006949 1076 0.769 - - 0.769 - - - - - - - chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
95. KLF13 ENSGALG00000026590 13 0.768 - - - - - - - - - 0.768 Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
96. FAM69A ENSGALG00000005918 157 0.766 - - 0.766 - - - - - - - family with sequence similarity 69 member A, transcript variant X4
97. SMYD3 ENSGALG00000010653 14 0.765 - - - - - - - - - 0.765 SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
98. EPHA1 ENSGALG00000014687 174 0.765 - - - - - - - - - 0.765 EPH receptor A1 [Source:NCBI gene;Acc:378782]
99. SNAP29 ENSGALG00000040128 3581 0.763 - - 0.763 - - - - - - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
100. BRINP2 ENSGALG00000004448 26 0.761 - - - - - - - - - 0.761 BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]

There are 46 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA