Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCBD1

Gene Name Gene ID Reads Annotation
PCBD1 ENSGALG00000027835 18019 pterin-4 alpha-carbinolamine dehydratase 1 [Source:NCBI gene;Acc:395729]











Genes with expression patterns similar to PCBD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCBD1 ENSGALG00000027835 18019 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 pterin-4 alpha-carbinolamine dehydratase 1 [Source:NCBI gene;Acc:395729]
2. SEC23A ENSGALG00000010150 11679 0.945 - - - - - - 0.945 - - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
3. PHF14 ENSGALG00000038041 13687 0.942 - - - - - - 0.942 - - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
4. CCNE1 ENSGALG00000004494 4945 0.94 - - - - - - 0.940 - - - cyclin E1 [Source:NCBI gene;Acc:426117]
5. TFDP2 ENSGALG00000025759 13407 0.939 - - - - - - 0.939 - - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
6. PANX2 ENSGALG00000000003 2185 0.926 - - - - - - 0.926 - - - pannexin 2 [Source:HGNC Symbol;Acc:HGNC:8600]
7. TF ENSGALG00000006453 14007 0.922 - - - - - - - - 0.922 - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
8. PHB ENSGALG00000038604 21632 0.921 - - - - - - 0.921 - - - prohibitin [Source:NCBI gene;Acc:419980]
9. HK1 ENSGALG00000004222 10733 0.919 - - - - - - 0.919 - - - hexokinase 1 [Source:NCBI gene;Acc:373889]
10. NFS1 ENSGALG00000001568 7113 0.919 - - - - - - 0.919 - - - NFS1, cysteine desulfurase [Source:NCBI gene;Acc:419133]
11. ACVR2B ENSGALG00000006158 8692 0.917 - - - - - - 0.917 - - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
12. SMN ENSGALG00000002430 7515 0.916 - - - - - - 0.916 - - - survival of motor neuron [Source:NCBI gene;Acc:374025]
13. SELK SELK 15022 0.915 - - - - - - 0.915 - - -
14. ATL2 ENSGALG00000037289 7926 0.91 - - - - - - 0.910 - - - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
15. DUSP19 ENSGALG00000043268 5543 0.904 - - - - - - 0.904 - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
16. CIDEA ENSGALG00000034500 405 0.904 - - - - - - - - 0.904 - cell death-inducing DFFA-like effector a [Source:NCBI gene;Acc:768659]
17. DERL2 ENSGALG00000041844 4509 0.903 - - - - - - 0.903 - - - derlin 2 [Source:HGNC Symbol;Acc:HGNC:17943]
18. RTN4IP1 ENSGALG00000015343 4366 0.887 - - - - - - 0.887 - - - reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
19. AP3S1 ENSGALG00000002341 12388 0.884 - - - - - - 0.884 - - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
20. CLTC ENSGALG00000005139 22130 0.883 - - - - - - 0.883 - - - clathrin heavy chain [Source:NCBI gene;Acc:395272]
21. LIX1 ENSGALG00000015290 7589 0.871 - - - - - - - - 0.871 - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
22. NPHS2 ENSGALG00000004163 850 0.867 - - - - - - - - 0.867 - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
23. SRMS ENSGALG00000005852 174 0.864 - - - - - - - - 0.864 - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
24. NFKBIZ ENSGALG00000015346 770 0.861 - - - - - - - - 0.861 - NFKB inhibitor zeta [Source:NCBI gene;Acc:418404]
25. PPDPF ENSGALG00000005849 16711 0.856 - - - - - - - - 0.856 - pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]
26. FAM49A ENSGALG00000016463 6345 0.843 - - - - - - - - 0.843 - family with sequence similarity 49 member A [Source:NCBI gene;Acc:421949]
27. NCAM1 ENSGALG00000007839 19929 0.835 - - - - - - 0.835 - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
28. ENSGALG00000026041 ENSGALG00000026041 13390 0.827 - - - - - - 0.827 - - -
29. PTPRQ ENSGALG00000010935 626 0.825 - - - - - - - - 0.825 - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
30. ZBTB7C ENSGALG00000033408 711 0.819 - - - - - - - - 0.819 - zinc finger and BTB domain containing 7C [Source:HGNC Symbol;Acc:HGNC:31700]
31. ATP5C1 53961 0.818 - - - - - - 0.818 - - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
32. PAX2 ENSGALG00000005689 351 0.811 - - - - - - - - 0.811 - paired box 2 [Source:NCBI gene;Acc:395574]
33. PDE6D ENSGALG00000033062 20177 0.803 - - - - - - 0.803 - - - phosphodiesterase 6D [Source:HGNC Symbol;Acc:HGNC:8788]
34. ENSGALG00000024035 ENSGALG00000024035 544 0.789 - - - - - - - - 0.789 -
35. SLC9A3R1 ENSGALG00000007650 13053 0.787 - - - - - - - - 0.787 - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
36. HBG1 HBG1 468163 0.785 - - - - - - - - 0.785 -
37. FNDC5 ENSGALG00000003567 3328 0.785 - - - - - - - - 0.785 - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
38. DCDC2 ENSGALG00000042454 2306 0.782 - - - - - - - - 0.782 - doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
39. HBE 329974 0.782 - - - - - - - - 0.782 - hemoglobin subunit epsilon
40. HBZ ENSGALG00000023740 507289 0.779 - - - - - - - - 0.779 - hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
41. MME ENSGALG00000010331 757 0.771 - - - - - - - - 0.771 - membrane metalloendopeptidase [Source:NCBI gene;Acc:425031]
42. PCP4 ENSGALG00000022819 880 0.77 - - - - - - - - 0.770 - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
43. TMEM123 ENSGALG00000017185 6798 0.754 - - - - - - - - 0.754 - transmembrane protein 123 [Source:NCBI gene;Acc:418984]
44. UBA3 ENSGALG00000013410 6923 0.753 - - - - - - 0.753 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
45. ACAA2 ENSGALG00000031142 29220 0.748 - - - - - - 0.748 - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
46. GTLF3B GTLF3B 5079 0.747 - - - - - - - - 0.747 -
47. CA2 ENSGALG00000030781 1723 0.746 - - - - - - - - 0.746 - carbonic anhydrase 2 [Source:NCBI gene;Acc:396257]
48. SCGN ENSGALG00000013598 778 0.746 - - - - - - - - 0.746 - secretagogin, EF-hand calcium binding protein [Source:HGNC Symbol;Acc:HGNC:16941]
49. PPIF ENSGALG00000004809 5586 0.745 - - - - - - 0.745 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
50. IMPACT ENSGALG00000015093 1334 0.743 - - - - - - 0.743 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
51. NDUFA9 ENSGALG00000017282 14358 0.742 - - - - - - 0.742 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
52. PRCP ENSGALG00000037521 4012 0.74 - - - - - - 0.740 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
53. FAH ENSGALG00000006482 589 0.74 - - - - - - - - 0.740 - fumarylacetoacetate hydrolase [Source:NCBI gene;Acc:415482]
54. ARHGAP24 ENSGALG00000011124 535 0.74 - - - - - - - - 0.740 - Rho GTPase activating protein 24 [Source:HGNC Symbol;Acc:HGNC:25361]
55. POLA1 ENSGALG00000016312 9440 0.739 - - - - - - 0.739 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
56. TM9SF3 ENSGALG00000005534 15290 0.738 - - - - - - 0.738 - - - transmembrane 9 superfamily member 3
57. MED6 ENSGALG00000029743 9414 0.738 - - - - - - 0.738 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
58. IRAK2 ENSGALG00000008407 5934 0.736 - - - - - - 0.736 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
59. ABCD3 ENSGALG00000005647 4844 0.736 - - - - - - 0.736 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
60. ATE1 ENSGALG00000009502 3751 0.735 - - - - - - 0.735 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
61. RARRES1 ENSGALG00000009594 3573 0.735 - - - - - - - - 0.735 - retinoic acid receptor responder 1 [Source:NCBI gene;Acc:395209]
62. MSRA ENSGALG00000028032 2607 0.735 - - - - - - 0.735 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
63. SLC25A14 ENSGALG00000004063 5574 0.733 - - - - - - 0.733 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
64. LCP1 ENSGALG00000016986 801 0.733 - - - - - - - - 0.733 - lymphocyte cytosolic protein 1 [Source:NCBI gene;Acc:418852]
65. CHMP7 ENSGALG00000000409 8967 0.732 - - - - - - 0.732 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
66. BFAR ENSGALG00000003111 1778 0.732 - - - - - - 0.732 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
67. GFM1 ENSGALG00000009634 7213 0.73 - - - - - - 0.730 - - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
68. LEPROTL1 ENSGALG00000024482 4251 0.73 - - - - - - 0.730 - - - leptin receptor overlapping transcript-like 1
69. RBBP6 ENSGALG00000006043 9708 0.73 - - - - - - 0.730 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
70. BTAF1 ENSGALG00000030598 3556 0.73 - - - - - - 0.730 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
71. E2F6 ENSGALG00000016454 4747 0.729 - - - - - - 0.729 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
72. AKAP7 ENSGALG00000029794 3287 0.729 - - - - - - 0.729 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
73. ENSGALG00000027854 ENSGALG00000027854 5007 0.729 - - - - - - 0.729 - - -
74. LACTB2 ENSGALG00000038745 3460 0.729 - - - - - - 0.729 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
75. LMNB2 ENSGALG00000000470 4364 0.729 - - - - - - 0.729 - - - lamin B2 [Source:NCBI gene;Acc:396222]
76. KIF15 ENSGALG00000036645 9946 0.728 - - - - - - 0.728 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
77. THOC2 ENSGALG00000008507 9501 0.728 - - - - - - 0.728 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
78. H2AFY_1 ENSGALG00000040141 4895 0.726 - - - - - - 0.726 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
79. AK6 ENSGALG00000020534 4791 0.726 - - - - - - 0.726 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
80. ENSGALG00000023609 ENSGALG00000023609 6933 0.726 - - - - - - - - 0.726 -
81. AP2B1 ENSGALG00000042125 13229 0.726 - - - - - - 0.726 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
82. RGCC ENSGALG00000016954 1282 0.725 - - - - - - 0.725 - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
83. CAMKK2 ENSGALG00000040131 2795 0.725 - - - - - - 0.725 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
84. MED7 ENSGALG00000003870 4244 0.725 - - - - - - 0.725 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
85. HACE1 ENSGALG00000015415 1194 0.724 - - - - - - 0.724 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
86. INTS10 ENSGALG00000010130 6320 0.724 - - - - - - 0.724 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
87. MOB2 ENSGALG00000030499 3658 0.724 - - - - - - 0.724 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
88. GAS6 ENSGALG00000016820 481 0.722 - - - - - - - - 0.722 - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
89. ARNT2 ENSGALG00000006445 7050 0.722 - - - - - - 0.722 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
90. NPHP3 ENSGALG00000034586 1465 0.722 - - - - - - 0.722 - - - nephrocystin 3, transcript variant X1
91. CLCN3 ENSGALG00000009674 3704 0.722 - - - - - - 0.722 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
92. SLC1A1 ENSGALG00000010187 637 0.722 - - - - - - 0.722 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
93. ENSGALG00000002923 ENSGALG00000002923 2233 0.722 - - - - - - 0.722 - - -
94. CETN2 ENSGALG00000007510 1688 0.722 - - - - - - 0.722 - - - centrin 2 [Source:NCBI gene;Acc:422303]
95. RILPL2 ENSGALG00000003321 5632 0.722 - - - - - - 0.722 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
96. POPDC3 ENSGALG00000027420 700 0.722 - - - - - - 0.722 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
97. MYST2 MYST2 8078 0.721 - - - - - - 0.721 - - -
98. POLR3E ENSGALG00000007008 4010 0.721 - - - - - - 0.721 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
99. NDUFB8 ENSGALG00000005704 5781 0.721 - - - - - - 0.721 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
100. KLHL29 ENSGALG00000016495 582 0.721 - - - - - - 0.721 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]

There are 49 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA