Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PBX1A

Gene Name Gene ID Reads Annotation
PBX1A ENSDARG00000100494 704 pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]










Genes with expression patterns similar to PBX1A

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PBX1A ENSDARG00000100494 704 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
2. LIMD1_1 LIMD1_1 348 2.25 - 0.786 - - - 0.709 0.755 - -
3. ank2b ENSDARG00000043313 3065 1.662 - - - - - 0.846 0.816 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
4. PPP1R9B PPP1R9B 855 1.642 - 0.905 - - - 0.737 - - -
5. si:ch211-14c7.2 ENSDARG00000094522 369 1.613 - 0.837 - - - - 0.776 - - si:ch211-14c7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-856]
6. ddx55 ENSDARG00000009864 415 1.594 - 0.778 - - - - 0.816 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:ZFIN;Acc:ZDB-GENE-021212-1]
7. meis2b ENSDARG00000077840 5166 1.582 - 0.834 - - - - 0.748 - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
8. fbxo11a ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 1129 1.581 - - - 0.758 - 0.823 - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
9. wu:fb17g07 wu:fb17g07 10567 1.569 - 0.827 - - - 0.742 - - -
10. ache ENSDARG00000031796 1985 1.569 - - - - - 0.786 0.783 - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
11. enpp5 ENSDARG00000070625 550 1.567 - 0.810 - - - - 0.757 - - ectonucleotide pyrophosphatase/phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-041014-10]
12. cited4b ENSDARG00000101009, ENSDARG00000114241 3632 1.551 - - - - - 0.820 0.731 - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b [Source:ZFIN;Acc:ZDB-GENE-030425-5]
13. tcap ENSDARG00000007344 276 1.549 - 0.828 - - - - - 0.721 - titin-cap (telethonin) [Source:ZFIN;Acc:ZDB-GENE-070501-5]
14. cacng1 cacng1 3118 1.549 - 0.796 - - - 0.753 - - -
15. klc3 ENSDARG00000055965 116 1.547 - 0.787 - - - - 0.760 - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
16. snrnp48 ENSDARG00000039989, ENSDARG00000112516 237 1.543 0.705 0.838 - - - - - - - small nuclear ribonucleoprotein 48 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-030131-4482]
17. runx1t1 ENSDARG00000003680 633 1.525 - 0.806 - - - 0.719 - - - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
18. tarsl2 ENSDARG00000092774 505 1.524 - 0.805 - - - - 0.719 - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
19. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.523 - 0.785 - - - - 0.738 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
20. CBFA2T3 ENSDARG00000079012 6799 1.523 - - - - - 0.777 0.746 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
21. rgs17 ENSDARG00000039435 590 1.517 - - - 0.712 - - 0.805 - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
22. zgc:77415 zgc:77415 383 1.514 0.814 - - - - 0.700 - - -
23. cap2 ENSDARG00000104478 3266 1.509 - 0.798 - - - - 0.711 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
24. fxr1 ENSDARG00000022968 2831 1.508 - - - - - 0.801 0.707 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
25. NPAS3 ENSDARG00000109820 362 1.508 - 0.708 - - - 0.800 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
26. camk2d2 ENSDARG00000014273 2840 1.506 - - - - - 0.805 0.701 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
27. rtn2b ENSDARG00000057027 1391 1.497 - 0.797 - - - 0.700 - - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
28. srpk3 ENSDARG00000005916 1546 1.496 0.726 0.770 - - - - - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
29. NRAP ENSDARG00000009341 3565 1.491 - 0.773 - - - - 0.718 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
30. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.48 - - - - - - 0.730 - 0.750 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
31. dnmt1 ENSDARG00000030756 2741 1.479 - 0.756 - - - 0.723 - - - DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
32. hif1an ENSDARG00000031915 2098 1.476 - - - - - 0.740 0.736 - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
33. tmem47 ENSDARG00000057322 4691 1.472 - 0.716 - - - - 0.756 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
34. AP3B2 1874 1.469 - 0.754 - - - - - - 0.715 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
35. trim55a ENSDARG00000029596 2858 1.467 - 0.718 - - - - 0.749 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
36. syngr3a ENSDARG00000014871 405 1.467 - 0.759 - - - - 0.708 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
37. marcksa ENSDARG00000004049 2518 1.46 - 0.759 - - - 0.701 - - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
38. DNAJC16 ENSDARG00000059699 507 1.458 - 0.728 - 0.730 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
39. entpd5b ENSDARG00000093659 450 1.457 - 0.735 - - - 0.722 - - - ectonucleoside triphosphate diphosphohydrolase 5b [Source:ZFIN;Acc:ZDB-GENE-091118-88]
40. RNF145 RNF145 1364 1.456 - - - - - 0.711 0.745 - -
41. six1b ENSDARG00000026473 1908 1.456 - 0.732 - - - 0.724 - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
42. PTPLA PTPLA 4044 1.454 - 0.719 - - - - 0.735 - -
43. ptch2 ENSDARG00000055026 980 1.452 - 0.745 - - - 0.707 - - - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
44. gap43 ENSDARG00000099744 4114 1.451 - 0.705 - - - - - - 0.746 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
45. txlnbb ENSDARG00000076241 6396 1.451 - - - - - 0.750 0.701 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
46. chrna1 ENSDARG00000009021 2931 1.447 0.704 0.743 - - - - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
47. secisbp2 ENSDARG00000073892 79 1.447 - 0.727 - - - - - 0.720 - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
48. clstn1 ENSDARG00000031720 5286 1.439 - - - - - 0.738 0.701 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
49. ndufa6 ENSDARG00000038028 2653 1.439 - 0.711 - - - 0.728 - - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
50. cax1 ENSDARG00000045601 366 1.439 - - - - - 0.720 0.719 - - cation/H+ exchanger protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3044]
51. twf2a ENSDARG00000094792 687 1.433 - - - - - 0.729 0.704 - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
52. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.431 - 0.700 - - - 0.731 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
53. smarca5 ENSDARG00000052348 15433 1.426 - 0.723 - - - 0.703 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
54. fabp7a ENSDARG00000007697 5211 1.426 - - - - - 0.709 0.717 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
55. CABZ01084569.1 CABZ01084569.1 650 1.418 - 0.704 - - - - 0.714 - -
56. mrps9 ENSDARG00000061505 1636 1.418 0.708 0.710 - - - - - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
57. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1.416 - - - - - 0.712 0.704 - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
58. lgi2a ENSDARG00000111069 965 1.416 - 0.710 - - - 0.706 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
59. zgc:158296 ENSDARG00000070923 3935 1.416 - 0.710 - - - 0.706 - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
60. shdb ENSDARG00000062109, ENSDARG00000111006 323 0.914 - 0.914 - - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
61. arntl1b ENSDARG00000035732, ENSDARG00000114562 349 0.912 - 0.912 - - - - - - - aryl hydrocarbon receptor nuclear translocator-like 1b [Source:ZFIN;Acc:ZDB-GENE-030408-1]
62. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 0.902 - 0.902 - - - - - - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
63. hpca ENSDARG00000018397, ENSDARG00000110115 3866 0.901 - 0.901 - - - - - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
64. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.887 - - - - - - 0.887 - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
65. cox6a2 ENSDARG00000054588, ENSDARG00000116120 121 0.881 - 0.881 - - - - - - - cytochrome c oxidase subunit 6A2 [Source:ZFIN;Acc:ZDB-GENE-040912-129]
66. ppp2r4 1005 0.881 - 0.881 - - - - - - - protein phosphatase 2A activator, regulatory subunit 4
67. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 0.875 - 0.875 - - - - - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
68. CHL1 CHL1 1553 0.869 - 0.869 - - - - - - -
69. vegfaa ENSDARG00000103542 436 0.868 - 0.868 - - - - - - - vascular endothelial growth factor Aa [Source:ZFIN;Acc:ZDB-GENE-990415-273]
70. rhoq ENSDARG00000025953 674 0.867 - 0.867 - - - - - - - ras homolog family member Q [Source:ZFIN;Acc:ZDB-GENE-030131-5721]
71. vars2 ENSDARG00000056717 283 0.866 - - - - - - 0.866 - - valyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-575]
72. syt11a ENSDARG00000057913 1145 0.863 - 0.863 - - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
73. tnika ENSDARG00000056218 728 0.861 - 0.861 - - - - - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
74. PCDH9 ENSDARG00000063264 1309 0.858 - 0.858 - - - - - - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
75. COQ5 ENSDARG00000035618 556 0.854 - 0.854 - - - - - - - coenzyme Q5, methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040912-5]
76. scdb ENSDARG00000030265 271 0.853 - 0.853 - - - - - - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
77. tspan5a ENSDARG00000086033 1865 0.853 - - - - - - 0.853 - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
78. scn8aa ENSDARG00000005775 792 0.852 - 0.852 - - - - - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
79. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.852 - 0.852 - - - - - - - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
80. stx1b ENSDARG00000000503 2724 0.851 - 0.851 - - - - - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
81. neurod neurod 1189 0.851 - 0.851 - - - - - - -
82. EFCAB6 ENSDARG00000020735 34 0.851 - 0.851 - - - - - - - EF-hand calcium binding domain 6 [Source:ZFIN;Acc:ZDB-GENE-070828-2]
83. zgc:113227 ENSDARG00000058874 266 0.851 - 0.851 - - - - - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
84. fam189a2 ENSDARG00000099946 177 0.849 - 0.849 - - - - - - - family with sequence similarity 189, member A2 [Source:ZFIN;Acc:ZDB-GENE-050309-90]
85. tjap1 ENSDARG00000010681 457 0.849 - 0.849 - - - - - - - tight junction associated protein 1 (peripheral) [Source:ZFIN;Acc:ZDB-GENE-081107-47]
86. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 0.849 - - - - - 0.849 - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
87. CU467824.1 CU467824.1 76 0.849 - - - - - - 0.849 - -
88. hspg2 ENSDARG00000076564 3440 0.847 - 0.847 - - - - - - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
89. kera ENSDARG00000056938 2434 0.845 - 0.845 - - - - - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
90. adprh ENSDARG00000040712 298 0.843 0.843 - - - - - - - - ADP-ribosylarginine hydrolase [Source:ZFIN;Acc:ZDB-GENE-040801-190]
91. mvk ENSDARG00000004130 105 0.842 - 0.842 - - - - - - - mevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-041114-37]
92. plekhm2 ENSDARG00000078850 207 0.842 - 0.842 - - - - - - - pleckstrin homology domain containing, family M (with RUN domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081022-169]
93. pcsk1nl ENSDARG00000076170 1232 0.842 - 0.842 - - - - - - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
94. slc1a3a ENSDARG00000104431 9888 0.842 - 0.842 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
95. USP54 USP54 186 0.841 - - - - - - 0.841 - -
96. cldn15a ENSDARG00000112049 264 0.84 - 0.840 - - - - - - - claudin 15a [Source:ZFIN;Acc:ZDB-GENE-040426-1305]
97. CMYA5 ENSDARG00000061379 65 0.839 - 0.839 - - - - - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
98. tbx15 ENSDARG00000002582 755 0.837 - 0.837 - - - - - - - T-box 15 [Source:ZFIN;Acc:ZDB-GENE-020529-1]
99. cacnb1 ENSDARG00000002167 1402 0.837 - 0.837 - - - - - - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]
100. zic4 ENSDARG00000031307 1228 0.837 - 0.837 - - - - - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]

There are 1214 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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