Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PBX1

Gene Name Gene ID Reads Annotation
PBX1 PBX1 148










Genes with expression patterns similar to PBX1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PBX1 PBX1 148 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:ch211-223f7.1 si:ch211-223f7.1 38 1.753 0.849 0.904 - - - - - - -
3. fgf10b ENSDARG00000100475 17 1.753 0.849 0.904 - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
4. MPZL2 MPZL2 31 1.753 0.849 0.904 - - - - - - -
5. zgc:113060 zgc:113060 63 1.74 0.940 0.800 - - - - - - -
6. ugt5e1 ENSDARG00000058048 25 1.687 0.783 0.904 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
7. AL929453.1 ENSDARG00000115950 31 1.656 - 0.904 - - - 0.752 - - -
8. atn1 ENSDARG00000092067 257 1.626 - 0.904 - - - - - - 0.722 atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
9. specc1 ENSDARG00000029480 54 1.611 - - - 0.755 - 0.856 - - - sperm antigen with calponin homology and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-060526-207]
10. znf142 ENSDARG00000061373 47 1.58 0.849 - - - - 0.731 - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
11. HBQ1 HBQ1 413 1.562 0.849 - - - - - 0.713 - -
12. habp2 ENSDARG00000057498 75 1.515 0.798 - - - - 0.717 - - - hyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
13. slx4 ENSDARG00000061414, ENSDARG00000093798 44 1.507 - 0.719 - - - - - 0.788 - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
14. aqp7 ENSDARG00000026787 37 1.5 0.783 - - - - 0.717 - - - aquaporin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6461]
15. si:ch1073-357b18.4 ENSDARG00000096602 121 1.5 0.789 0.711 - - - - - - - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
16. ZNF408 ENSDARG00000036043 232 1.488 0.783 0.705 - - - - - - - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
17. zgc:55413 79 1.468 0.727 - - - - - 0.741 - - zgc:55413
18. SNORA2 SNORA2 486 1.462 - - - - 0.758 - 0.704 - -
19. CT025914.2 CT025914.2 53 1.452 0.700 - - - - 0.752 - - -
20. CABZ01084613.1 CABZ01084613.1 22 1.444 0.736 - - - - - 0.708 - -
21. traf3 ENSDARG00000022000 156 1.44 0.726 0.714 - - - - - - - TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257]
22. cxcl-c1c cxcl-c1c 159 1 1.000 - - - - - - - -
23. tnk2a ENSDARG00000090646 133 1 1.000 - - - - - - - - tyrosine kinase, non-receptor, 2a [Source:ZFIN;Acc:ZDB-GENE-091118-85]
24. si:dkeyp-14d3.1 66 1 1.000 - - - - - - - - si:dkeyp-14d3.1, transcript variant X4
25. tbr1a ENSDARG00000076259 341 1 1.000 - - - - - - - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
26. tacr3l ENSDARG00000003054 10 1 1.000 - - - - - - - - tachykinin receptor 3-like [Source:ZFIN;Acc:ZDB-GENE-061207-19]
27. klhl38 klhl38 44 0.984 - 0.984 - - - - - - -
28. fastkd3 ENSDARG00000100440 144 0.984 - 0.984 - - - - - - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
29. si:ch211-235f12.2 ENSDARG00000092119 31 0.967 0.967 - - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
30. lhfpl2b ENSDARG00000098153 132 0.961 - 0.961 - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
31. SDR42E2 ENSDARG00000059914 132 0.961 - 0.961 - - - - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]
32. si:dkey-114c15.7 237 0.961 - 0.961 - - - - - - - si:dkey-114c15.7
33. chst3a ENSDARG00000061070 127 0.959 0.959 - - - - - - - - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
34. dok6 ENSDARG00000063032 88 0.959 0.959 - - - - - - - - docking protein 6 [Source:ZFIN;Acc:ZDB-GENE-070410-50]
35. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 0.959 0.959 - - - - - - - -
36. thsd7ba ENSDARG00000095022 231 0.941 0.941 - - - - - - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
37. tmem175 ENSDARG00000076376, ENSDARG00000111449 136 0.94 0.940 - - - - - - - - transmembrane protein 175 [Source:ZFIN;Acc:ZDB-GENE-070705-79]
38. celf3b ENSDARG00000006983 171 0.94 0.940 - - - - - - - - cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
39. si:ch211-263m18.4 ENSDARG00000093353 27 0.94 0.940 - - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
40. rhd ENSDARG00000002194 269 0.938 0.938 - - - - - - - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
41. si:ch211-244b2.3 ENSDARG00000069244 19 0.929 - 0.929 - - - - - - - si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
42. CAPN1_1 ENSDARG00000055338 288 0.928 0.928 - - - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
43. CU694319.1 CU694319.1 72 0.927 - - - - - 0.927 - - -
44. zgc:162612 ENSDARG00000079699 244 0.919 0.919 - - - - - - - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
45. zgc:193690 34 0.917 0.917 - - - - - - - - zgc:193690
46. si:ch211-22k7.1 si:ch211-22k7.1 30 0.915 0.915 - - - - - - - -
47. zgc:110782 ENSDARG00000044544 48 0.909 0.909 - - - - - - - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
48. c2cd2l ENSDARG00000061066 136 0.909 - 0.909 - - - - - - - c2cd2-like [Source:ZFIN;Acc:ZDB-GENE-041019-1]
49. BX530409.1 BX530409.1 65 0.906 - - - - - 0.906 - - -
50. rtn4r ENSDARG00000090035 46 0.905 - - - - - 0.905 - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
51. cntnap5a ENSDARG00000073920 39 0.904 - 0.904 - - - - - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
52. megf8 ENSDARG00000079751, ENSDARG00000103934 1 0.904 - 0.904 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
53. si:ch211-103a14.1 si:ch211-103a14.1 1 0.904 - 0.904 - - - - - - -
54. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 0.904 - 0.904 - - - - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
55. tmc1 23 0.904 - 0.904 - - - - - - - transmembrane channel-like 1, transcript variant X1
56. sept4a ENSDARG00000010385 75 0.904 - 0.904 - - - - - - - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
57. neurod2 ENSDARG00000016854 6 0.904 - 0.904 - - - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
58. RP1L1 RP1L1 15 0.904 - 0.904 - - - - - - -
59. CU302326.2 CU302326.2 54 0.904 - 0.904 - - - - - - -
60. dnaaf3 ENSDARG00000092662 20 0.904 - 0.904 - - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
61. CA4 CA4 1 0.904 - 0.904 - - - - - - -
62. anks4b ENSDARG00000036846 8 0.904 - 0.904 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
63. slc35f3a ENSDARG00000075909 1 0.904 - 0.904 - - - - - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
64. spo11 ENSDARG00000013837 7 0.904 - 0.904 - - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
65. cx50.5 cx50.5 15 0.904 - 0.904 - - - - - - -
66. QSOX2 ENSDARG00000077174 26 0.904 - 0.904 - - - - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
67. F13A1 F13A1 1 0.904 - 0.904 - - - - - - -
68. zp3a.1 ENSDARG00000042129 18 0.904 - 0.904 - - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
69. si:ch211-145h19.1 31 0.904 - 0.904 - - - - - - - si:ch211-145h19.1
70. ENSDARG00000088164 ENSDARG00000088164 59 0.904 - 0.904 - - - - - - -
71. zgc:172282 ENSDARG00000105059 64 0.904 - 0.904 - - - - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
72. si:dkey-85n7.11 si:dkey-85n7.11 2 0.904 - 0.904 - - - - - - -
73. rapgef5b ENSDARG00000074307 112 0.904 - 0.904 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
74. si:ch73-115f13.1 si:ch73-115f13.1 15 0.904 - 0.904 - - - - - - -
75. cabp1a ENSDARG00000019990 110 0.904 - 0.904 - - - - - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
76. USP53 USP53 5 0.904 - 0.904 - - - - - - -
77. CABZ01081674.1 CABZ01081674.1 15 0.904 - 0.904 - - - - - - -
78. si:ch211-79g12.1 ENSDARG00000116692 2 0.904 - 0.904 - - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
79. si:dkey-15h19.3 si:dkey-15h19.3 5 0.904 - 0.904 - - - - - - -
80. si:ch73-381a20.2 si:ch73-381a20.2 11 0.904 - 0.904 - - - - - - -
81. BX682552.2_1 BX682552.2_1 37 0.904 - 0.904 - - - - - - -
82. BX511182.1 BX511182.1 8 0.904 - 0.904 - - - - - - -
83. HMBOX1 HMBOX1 67 0.904 - 0.904 - - - - - - -
84. MFAP4_4 MFAP4_4 9 0.904 - 0.904 - - - - - - -
85. oxgr1a.1 ENSDARG00000033684 24 0.904 - 0.904 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
86. si:ch211-113a14.14_1 si:ch211-113a14.14_1 7 0.904 - 0.904 - - - - - - -
87. MAP7_1 MAP7_1 42 0.904 - 0.904 - - - - - - -
88. asic2 ENSDARG00000006849 18 0.904 - 0.904 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
89. si:ch211-253d24.2 si:ch211-253d24.2 12 0.904 - 0.904 - - - - - - -
90. si:ch211-229i14.2 ENSDARG00000086048 19 0.904 - 0.904 - - - - - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
91. PBRM1 ENSDARG00000003877 225 0.904 - 0.904 - - - - - - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
92. EFEMP1 32 0.904 - 0.904 - - - - - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
93. si:dkey-176g1.4 si:dkey-176g1.4 1 0.904 - 0.904 - - - - - - -
94. si:dkey-25i10.5 si:dkey-25i10.5 18 0.904 - 0.904 - - - - - - -
95. bgna ENSDARG00000017884 9 0.904 - 0.904 - - - - - - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
96. BX957311.1 ENSDARG00000097710 1 0.904 - 0.904 - - - - - - -
97. ctso ENSDARG00000052855 29 0.904 - 0.904 - - - - - - - cathepsin O [Source:ZFIN;Acc:ZDB-GENE-080724-8]
98. aftphb ENSDARG00000071347 161 0.904 - 0.904 - - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
99. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 0.904 - 0.904 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
100. pcolce2a ENSDARG00000008450 22 0.904 - 0.904 - - - - - - - procollagen C-endopeptidase enhancer 2a [Source:ZFIN;Acc:ZDB-GENE-070705-25]

There are 676 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA