Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PAX3

Gene Name Gene ID Reads Annotation
PAX3 ENSGALG00000030944 2987 paired box 3 [Source:NCBI gene;Acc:374127]











Genes with expression patterns similar to PAX3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PAX3 ENSGALG00000030944 2987 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired box 3 [Source:NCBI gene;Acc:374127]
2. PAX-7 PAX-7 3856 4.818 - - 0.798 0.726 - 0.897 0.762 - 0.782 0.853
3. TRABD2A ENSGALG00000026395 704 3.135 - - - - 0.787 0.845 - - 0.783 0.720 TraB domain containing 2A, transcript variant X3
4. DRAXIN ENSGALG00000004631 3122 2.51 - - 0.861 0.767 - 0.882 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
5. WNT4 ENSGALG00000041708 1277 2.483 - - 0.812 0.764 - 0.907 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
6. ENSGALG00000027373 ENSGALG00000027373 2129 2.283 - - - 0.752 0.822 0.709 - - - -
7. HES5 ENSGALG00000001141 6514 2.265 - - - - 0.731 0.823 - - 0.711 - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
8. MYL4 ENSGALG00000000585 16982 1.696 - - - - - 0.899 0.797 - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
9. ZIC1 ENSGALG00000040532 6543 1.645 - - 0.751 - - 0.894 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
10. SMPD3 ENSGALG00000034950 4335 1.634 - - - - 0.863 0.771 - - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
11. GNG10 ENSGALG00000015683 6905 1.632 - - - - 0.712 0.920 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
12. ZIC3 ENSGALG00000031144 863 1.628 - - - - - 0.870 - - 0.758 - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
13. NPAS3 ENSGALG00000029022 1950 1.611 - - 0.724 - - 0.887 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
14. LFNG ENSGALG00000038515 5178 1.582 - - 0.743 - - 0.839 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
15. DENND5B 4077 1.581 - - 0.712 - - 0.869 - - - - DENN domain containing 5B, transcript variant X1
16. PTPRZ1 ENSGALG00000040114 3410 1.574 - - - 0.706 - 0.868 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
17. LASP-2 LASP-2 4415 1.564 - - 0.721 - - 0.843 - - - -
18. MOXD1 ENSGALG00000002911 8523 1.554 - - - - - 0.829 0.725 - - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
19. HES6 ENSGALG00000028415 4830 1.506 - - - - - 0.754 - - 0.752 - hes family bHLH transcription factor 6
20. ENSGALG00000022967 ENSGALG00000022967 240 1.492 - - - - - 0.767 - - - 0.725
21. LDHB ENSGALG00000035836 169726 1.486 - - - - - 0.780 - - 0.706 - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
22. HOXB-7 HOXB-7 2066 1.421 - - - 0.717 0.704 - - - - -
23. LIPG ENSGALG00000043734 2490 0.929 - - - - - 0.929 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
24. LOC395159 ENSGALG00000010722 9417 0.921 - - - - - 0.921 - - - - Schwann cell-specific EGF-like repeat autocrine factor
25. CMTM8 ENSGALG00000011484 2826 0.909 - - - - - - 0.909 - - - CKLF like MARVEL transmembrane domain containing 8 [Source:NCBI gene;Acc:420665]
26. CRABP-I ENSGALG00000003193 67258 0.898 - - - - - 0.898 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
27. CERCAM ENSGALG00000004986 5158 0.883 - - - - - 0.883 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
28. IRX1 ENSGALG00000030991 1474 0.883 - - - - - 0.883 - - - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
29. SRGAP3 ENSGALG00000008378 4331 0.876 - - - - - 0.876 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
30. MARCKSL1 ENSGALG00000032335 88728 0.871 - - - - - 0.871 - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
31. OPTC ENSGALG00000003554 3698 0.864 - - - - - 0.864 - - - - opticin [Source:NCBI gene;Acc:395130]
32. CHL1 ENSGALG00000037856 1565 0.847 - - - - - 0.847 - - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
33. FGFR3 ENSGALG00000015708 16853 0.843 - - - - - 0.843 - - - - fibroblast growth factor receptor 3 [Source:NCBI gene;Acc:396515]
34. CXCR4 ENSGALG00000012357 1320 0.841 - - - - - 0.841 - - - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
35. NTM ENSGALG00000001437 584 0.832 - - - - - 0.832 - - - - neurotrimin [Source:NCBI gene;Acc:395450]
36. COL14A1 ENSGALG00000037675 2652 0.832 - - - - - 0.832 - - - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
37. FZD3 ENSGALG00000042308 3356 0.829 - - - - - 0.829 - - - - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
38. GHOX-7 GHOX-7 2555 0.828 - - - - - 0.828 - - - -
39. NSG1 ENSGALG00000015010 5829 0.827 - - - - - 0.827 - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
40. RASSF2 ENSGALG00000030432 4822 0.826 - - - - - 0.826 - - - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
41. DLL1 ENSGALG00000011182 1613 0.824 - - - - - 0.824 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
42. VIP ENSGALG00000013604 153 0.823 - - - - - 0.823 - - - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
43. CKB ENSGALG00000011511 2100 0.821 - - - - - 0.821 - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
44. ACVR2B ENSGALG00000006158 8692 0.816 - - - - - 0.816 - - - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
45. BMP7 ENSGALG00000007668 6645 0.815 - - - - - 0.815 - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
46. ZBTB16 ENSGALG00000038540 5544 0.808 - - - - - 0.808 - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
47. ASTN1 ENSGALG00000004472 855 0.804 - - - - - 0.804 - - - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
48. gga-mir-10b ENSGALG00000018331 147 0.802 - - 0.802 - - - - - - - gga-mir-10b [Source:miRBase;Acc:MI0001216]
49. NDP ENSGALG00000016222 1067 0.8 - - - - 0.800 - - - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
50. RTN1 ENSGALG00000012006 2438 0.794 - - - - - 0.794 - - - - reticulon 1 [Source:NCBI gene;Acc:378791]
51. FABP7 ENSGALG00000038933 6780 0.793 - - - - - 0.793 - - - - fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
52. RNF8 ENSGALG00000023256 5495 0.786 - - - - - - 0.786 - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
53. GYG1 ENSGALG00000035535 6311 0.784 - - - - - - 0.784 - - - glycogenin 1 [Source:NCBI gene;Acc:425050]
54. gga-mir-1725 gga-mir-1725 178 0.777 - - - - - 0.777 - - - -
55. NFASC ENSGALG00000031776 4264 0.777 - - - - - 0.777 - - - - neurofascin [Source:NCBI gene;Acc:419824]
56. NEFM ENSGALG00000000317 6992 0.777 - - - - - 0.777 - - - - neurofilament medium [Source:NCBI gene;Acc:396206]
57. SOX10 ENSGALG00000012290 3942 0.775 - - - - - 0.775 - - - - SRY-box 10 [Source:NCBI gene;Acc:395573]
58. PRKCA ENSGALG00000025950 1255 0.774 - - - - - 0.774 - - - - protein kinase C alpha [Source:NCBI gene;Acc:417430]
59. PTBP2 ENSGALG00000005552 3443 0.77 - - - - - 0.770 - - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
60. ISM1 ENSGALG00000009042 196 0.768 - - - - - 0.768 - - - - isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
61. LRRC4C ENSGALG00000007948 9 0.767 - - - - - 0.767 - - - - leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:HGNC:29317]
62. GRAMD4 ENSGALG00000034274 3826 0.766 - - - - - - 0.766 - - - GRAM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:29113]
63. JAM2 ENSGALG00000015746 514 0.765 - - - - - 0.765 - - - - junctional adhesion molecule 2 [Source:NCBI gene;Acc:418476]
64. MMD2 ENSGALG00000004530 167 0.765 - - - - - 0.765 - - - - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
65. NEFL ENSGALG00000000314 4883 0.764 - - - - - 0.764 - - - - neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
66. SMOC1 ENSGALG00000009415 2403 0.758 - - - - - 0.758 - - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
67. MURC 3759 0.756 - - - - - 0.756 - - - - muscle related coiled-coil protein
68. GDPD4 ENSGALG00000000690 824 0.755 - - - - - 0.755 - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
69. SLC35F1 ENSGALG00000029011 14728 0.755 - - - - - 0.755 - - - - solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
70. PHLDB1 ENSGALG00000040030 2423 0.754 - - - - - 0.754 - - - - pleckstrin homology like domain family B member 1 [Source:HGNC Symbol;Acc:HGNC:23697]
71. DCLK2 ENSGALG00000032386 2253 0.747 - - - - - 0.747 - - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
72. CRYAB ENSGALG00000007945 937 0.745 - - - - - 0.745 - - - - crystallin alpha B [Source:NCBI gene;Acc:396089]
73. SLC1A3 ENSGALG00000003582 2283 0.745 - - - - - 0.745 - - - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
74. CLEC18B ENSGALG00000027183 284 0.744 - - - - - 0.744 - - - - C-type lectin domain family 18 member B, transcript variant X2
75. ELOVL4 ENSGALG00000015876 853 0.743 - - - - - 0.743 - - - - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
76. HIGD1A ENSGALG00000030775 5724 0.742 - - - - - 0.742 - - - - HIG1 hypoxia inducible domain family member 1A [Source:NCBI gene;Acc:768335]
77. ALDOC ENSGALG00000026077 106910 0.74 - - - - - 0.740 - - - - aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
78. IRX2 ENSGALG00000013193 2170 0.735 - - - - - 0.735 - - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
79. USP14 ENSGALG00000014920 18778 0.733 - - - - - 0.733 - - - - ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
80. SPIRE2 ENSGALG00000000521 26 0.733 - - - - - 0.733 - - - - spire type actin nucleation factor 2 [Source:HGNC Symbol;Acc:HGNC:30623]
81. RGCC ENSGALG00000016954 1282 0.732 - - - - 0.732 - - - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
82. WLS ENSGALG00000011238 20969 0.731 - - - - - 0.731 - - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
83. FASN ENSGALG00000040896 17372 0.731 - - - - - 0.731 - - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
84. PENK ENSGALG00000015419 1656 0.73 - - 0.730 - - - - - - - proenkephalin [Source:HGNC Symbol;Acc:HGNC:8831]
85. C17orf75 ENSGALG00000003434 4262 0.73 - - - - - 0.730 - - - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
86. BOC ENSGALG00000015152 4868 0.728 - - - - - 0.728 - - - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
87. LRP2 ENSGALG00000010858 363 0.727 - - - - - 0.727 - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
88. GABRA3 ENSGALG00000007269 985 0.726 - - - - - 0.726 - - - - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
89. HOXB2 ENSGALG00000025774 5280 0.725 - - - - - 0.725 - - - - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
90. BRSK2 ENSGALG00000006681 158 0.722 - - - - - 0.722 - - - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
91. ENSGALG00000026584 ENSGALG00000026584 77 0.722 - - 0.722 - - - - - - -
92. SCG3 ENSGALG00000043583 1247 0.721 - - - - - 0.721 - - - - secretogranin III [Source:NCBI gene;Acc:415424]
93. RABL5 RABL5 5264 0.721 - - - - - - 0.721 - - -
94. PROCA1 668 0.717 - - - - - 0.717 - - - - protein interacting with cyclin A1
95. RXRG ENSGALG00000040730 776 0.715 - - - - - 0.715 - - - - retinoid X receptor gamma [Source:NCBI gene;Acc:396231]
96. HOXD4 ENSGALG00000023419 6073 0.714 - - - - - 0.714 - - - - homeobox D4 [Source:NCBI gene;Acc:424139]
97. ENSGALG00000013357 ENSGALG00000013357 2282 0.713 - - - - - 0.713 - - - -
98. ADCY8 ENSGALG00000030251 40 0.712 - - - - - 0.712 - - - - adenylate cyclase 8 [Source:HGNC Symbol;Acc:HGNC:239]
99. TFAP2A ENSGALG00000012775 294 0.712 - - - - - 0.712 - - - - transcription factor AP-2 alpha [Source:NCBI gene;Acc:395982]
100. TUBB2C TUBB2C 44249 0.711 - - - - - 0.711 - - - -

There are 15 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA