Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PAX1

Gene Name Gene ID Reads Annotation
PAX1 ENSGALG00000039040 3339 paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]











Genes with expression patterns similar to PAX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PAX1 ENSGALG00000039040 3339 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
2. LECT1 LECT1 12694 5.074 - - 0.868 0.852 0.942 0.775 - - 0.758 0.879
3. ENSGALG00000010113 ENSGALG00000010113 508 3.953 - - 0.875 - 0.711 0.816 - - 0.765 0.786
4. ACTC1 ENSGALG00000009844 20914 3.061 - - 0.712 0.772 0.745 - - - - 0.832 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
5. SOX9 ENSGALG00000004386 14802 2.707 - - 0.878 0.922 0.907 - - - - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
6. C1QTNF3 ENSGALG00000027887 8646 2.582 - - 0.811 0.862 0.909 - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
7. COL9A3 ENSGALG00000005628 2842 2.509 - - 0.921 - 0.821 - - - - 0.767 collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
8. EN1 ENSGALG00000042389 3051 2.482 - - 0.833 0.751 0.898 - - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
9. CRIP1 ENSGALG00000002771 4270 2.478 - - 0.862 0.852 - 0.764 - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
10. PKD2L2 ENSGALG00000006120 592 2.437 - - 0.766 0.830 0.841 - - - - - polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
11. EMILIN3 ENSGALG00000030012 6200 2.4 - - 0.853 0.755 0.792 - - - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
12. gga-mir-7474 ENSGALG00000033766 5727 2.37 - - - 0.792 0.734 - - - - 0.844 gga-mir-7474 [Source:miRBase;Acc:MI0024147]
13. TNFIP6 TNFIP6 3024 2.363 - - - - - 0.763 - - 0.793 0.807
14. CPZ ENSGALG00000030209 8822 2.358 - - - 0.867 - 0.716 - - - 0.775 carboxypeptidase Z [Source:NCBI gene;Acc:395266]
15. SPON1 ENSGALG00000038775 16503 2.328 - - 0.772 0.735 0.821 - - - - - spondin 1 [Source:NCBI gene;Acc:395657]
16. TCF15 ENSGALG00000026276 3646 2.314 - - - - 0.762 0.822 - - 0.730 - transcription factor 15 [Source:NCBI gene;Acc:395788]
17. PAX-9 PAX-9 491 2.27 - - - - 0.759 0.701 - - 0.810 -
18. TNNC2 ENSGALG00000006835 2963 2.198 - - 0.747 0.717 0.734 - - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
19. EFEMP1 ENSGALG00000037901 704 2.187 - - 0.701 0.756 0.730 - - - - - EGF containing fibulin extracellular matrix protein 1 [Source:HGNC Symbol;Acc:HGNC:3218]
20. ARID4A ENSGALG00000012037 8554 1.804 - - - - - - 0.900 0.904 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
21. SLC25A14 ENSGALG00000004063 5574 1.777 - - - - - - 0.857 0.920 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
22. CYP1B1 ENSGALG00000025822 3143 1.744 - - 0.886 - - - - - - 0.858 cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
23. COL9A2 ENSGALG00000027526 4685 1.712 - - 0.896 - 0.816 - - - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
24. SMOC1 ENSGALG00000009415 2403 1.702 - - 0.850 - - - - - - 0.852 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
25. KCNMB4 ENSGALG00000010044 377 1.673 - - - - - 0.865 - - 0.808 - potassium calcium-activated channel subfamily M regulatory beta subunit 4 [Source:NCBI gene;Acc:417852]
26. WWP2 ENSGALG00000000699 5040 1.654 - - 0.865 - - - - - - 0.789 WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
27. SCARA3 ENSGALG00000026651 2559 1.63 - - 0.836 - 0.794 - - - - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
28. AIF1L ENSGALG00000029834 13866 1.63 - - - - - 0.838 - - - 0.792 allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
29. SULF1 ENSGALG00000039553 5115 1.616 - - - - - - - - 0.809 0.807 sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
30. SHH ENSGALG00000006379 1943 1.61 - - 0.877 0.733 - - - - - - sonic hedgehog [Source:NCBI gene;Acc:395615]
31. C9H2ORF82 ENSGALG00000040264 4201 1.602 - - 0.849 - 0.753 - - - - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
32. SST ENSGALG00000007361 1383 1.594 - - 0.864 - 0.730 - - - - - somatostatin [Source:NCBI gene;Acc:396279]
33. ACBD7 ENSGALG00000019663 2328 1.589 - - 0.824 - 0.765 - - - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
34. COL8A1 ENSGALG00000015253 2505 1.571 - - 0.823 - 0.748 - - - - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
35. CENPF ENSGALG00000009690 10429 1.565 - - - - - - 0.833 0.732 - - centromere protein F [Source:NCBI gene;Acc:395357]
36. COL9A1 ENSGALG00000015970 3788 1.559 - - 0.838 - 0.721 - - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
37. T ENSGALG00000011489 2619 1.552 - - 0.850 - 0.702 - - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
38. MEOX2 ENSGALG00000010794 1556 1.547 - - - - 0.752 0.795 - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
39. SPOCK1 ENSGALG00000006258 2892 1.546 - - 0.733 - - - - - - 0.813 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:HGNC Symbol;Acc:HGNC:11251]
40. COL4A1 ENSGALG00000036798 12749 1.528 - - - - - 0.740 0.788 - - - collagen type IV alpha 1 chain [Source:NCBI gene;Acc:395530]
41. LOX ENSGALG00000028063 1488 1.517 - - - 0.813 0.704 - - - - - lysyl oxidase [Source:NCBI gene;Acc:396474]
42. TRIM55 ENSGALG00000041327 1097 1.516 - - 0.737 - - - - - - 0.779 tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
43. ANGPTL1 ENSGALG00000004290 1922 1.478 - - - 0.722 - - - - - 0.756 angiopoietin like 1 [Source:NCBI gene;Acc:770850]
44. TNNC1 ENSGALG00000001459 7110 1.469 - - 0.714 - 0.755 - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
45. AHCY ENSGALG00000033677 35555 1.455 - - - 0.753 - - - - - 0.702 adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
46. PMP22 ENSGALG00000031425 5358 1.441 - - 0.736 - - - - - 0.705 - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
47. MRPL38 ENSGALG00000002194 6648 0.985 - - - - - - - 0.985 - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
48. N6AMT2 N6AMT2 4703 0.98 - - - - - - - 0.980 - -
49. PTP4A1 ENSGALG00000016271 23953 0.958 - - - - - - - 0.958 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
50. DGKZ ENSGALG00000008380 5389 0.941 - - - - - - - 0.941 - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
51. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.936 - - - - - - - 0.936 - -
52. EEFSEC ENSGALG00000038684 298 0.935 - - - - - - - 0.935 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
53. LATS2 4776 0.935 - - - - - - 0.935 - - - large tumor suppressor kinase 2
54. TNPO3 ENSGALG00000039420 5178 0.934 - - - - - - - 0.934 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
55. PRKAR2A ENSGALG00000007023 909 0.934 - - - - - - - 0.934 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
56. C26H6ORF106 C26H6ORF106 2168 0.934 - - - - - - - 0.934 - -
57. COL14A1 ENSGALG00000037675 2652 0.934 - - - - - - - 0.934 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
58. CLIP1 ENSGALG00000004467 1058 0.934 - - - - - - - 0.934 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
59. B9D1 ENSGALG00000005096 760 0.934 - - - - - - - 0.934 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
60. TCTEX1D2 ENSGALG00000027722 2201 0.933 - - - - - - - 0.933 - - Tctex1 domain containing 2
61. GOT2 ENSGALG00000002321 4961 0.933 - - - - - - - 0.933 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
62. EPM2A ENSGALG00000012275 872 0.933 - - - - - - - 0.933 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
63. POLR3H ENSGALG00000011947 2899 0.933 - - - - - - - 0.933 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
64. TLE3 ENSGALG00000008120 2655 0.932 - - - - - - - 0.932 - - transducin like enhancer of split 3, transcript variant X10
65. ELMO2 ENSGALG00000007246 4569 0.932 - - - - - - - 0.932 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
66. TNFRSF11B ENSGALG00000043167 911 0.932 - - - - - - - 0.932 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
67. WDR91 ENSGALG00000011724 5787 0.932 - - - - - - - 0.932 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
68. KCNK5 ENSGALG00000034077 3233 0.932 - - - - - - - 0.932 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
69. MRPS31 ENSGALG00000017033 9287 0.931 - - - - - - - 0.931 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
70. TMEM108 ENSGALG00000036412 2903 0.931 - - - - - - 0.931 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
71. KPNA1 ENSGALG00000014426 2724 0.931 - - - - - - - 0.931 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
72. PM20D1 ENSGALG00000000724 2108 0.931 - - - - - - - 0.931 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
73. CCDC167 ENSGALG00000010151 3567 0.93 - - - - - - - 0.930 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
74. LYRM4 ENSGALG00000027339 2917 0.93 - - - - - - - 0.930 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
75. MRPS7 ENSGALG00000007999 5445 0.929 - - - - - - - 0.929 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
76. ARFGAP3 ENSGALG00000014140 4612 0.929 - - - - - - - 0.929 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
77. GNG10 ENSGALG00000015683 6905 0.929 - - - - - - - 0.929 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
78. CAPZA1 ENSGALG00000001547 24242 0.927 - - - - - - - 0.927 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
79. RAB24 ENSGALG00000002984 6264 0.926 - - - - - - - 0.926 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
80. BMP5 ENSGALG00000016293 2119 0.926 - - - - - - - 0.926 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
81. OTUD4 ENSGALG00000009968 3919 0.926 - - - - - - - 0.926 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
82. NOVA1 ENSGALG00000009850 7584 0.925 - - - - - - - 0.925 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
83. CEP192 ENSGALG00000035625 2270 0.925 - - - - - - - 0.925 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
84. L3HYPDH ENSGALG00000012011 2212 0.925 - - - - - - - 0.925 - - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
85. TRIM9 ENSGALG00000012367 1267 0.924 - - - - - - - 0.924 - - tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
86. SERPINH1 ENSGALG00000011214 15311 0.923 - - - - - - - 0.923 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
87. MFF ENSGALG00000003079 5289 0.922 - - - - - - - 0.922 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
88. CLCN3 ENSGALG00000009674 3704 0.921 - - - - - - 0.921 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
89. SHROOM2 ENSGALG00000030802 4517 0.921 - - - - - - - 0.921 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
90. ATPAF1 ENSGALG00000010444 3677 0.92 - - - - - - - 0.920 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
91. ID1 ENSGALG00000034661 44524 0.92 - - - - - - - 0.920 - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
92. SGCE ENSGALG00000009670 3070 0.92 - - - - - - - 0.920 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
93. TRMT10A ENSGALG00000012264 2467 0.92 - - - - - - - 0.920 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
94. LGMN ENSGALG00000010811 7401 0.919 - - - - - - - 0.919 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
95. HHIP ENSGALG00000009948 1536 0.918 - - - - - - - 0.918 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
96. PDIA5 ENSGALG00000011689 6913 0.916 - - - - - - - 0.916 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
97. DPYSL2 ENSGALG00000000227 9668 0.916 - - - - - - - 0.916 - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
98. MOB2 ENSGALG00000030499 3658 0.916 - - - - - - 0.916 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
99. UPF3B ENSGALG00000008618 12350 0.914 - - - - - - - 0.914 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
100. OGFOD1 6926 0.912 - - - - - - 0.912 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1

There are 301 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA