Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PAX-7

Gene Name Gene ID Reads Annotation
PAX-7 PAX-7 3856











Genes with expression patterns similar to PAX-7

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PAX-7 PAX-7 3856 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. PAX3 ENSGALG00000030944 2987 4.818 - - 0.798 0.726 - 0.897 0.762 - 0.782 0.853 paired box 3 [Source:NCBI gene;Acc:374127]
3. DRAXIN ENSGALG00000004631 3122 3.768 - - 0.709 0.773 - 0.748 - - 0.780 0.758 dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
4. ZIC1 ENSGALG00000040532 6543 3.133 - - - 0.730 0.762 0.835 - - - 0.806 Zic family member 1 [Source:NCBI gene;Acc:374103]
5. MARCKSL1 ENSGALG00000032335 88728 2.512 - - 0.713 - 0.913 0.886 - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
6. OPTC ENSGALG00000003554 3698 2.501 - - - - 0.952 0.828 0.721 - - - opticin [Source:NCBI gene;Acc:395130]
7. ZIC3 ENSGALG00000031144 863 2.371 - - - - - 0.755 0.810 - - 0.806 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
8. HOXD4 ENSGALG00000023419 6073 2.253 - - 0.701 0.718 - 0.834 - - - - homeobox D4 [Source:NCBI gene;Acc:424139]
9. FZD3 ENSGALG00000042308 3356 1.751 - - - - - 0.883 0.868 - - - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
10. NSG1 ENSGALG00000015010 5829 1.739 - - - - 0.950 0.789 - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
11. RNF113A ENSGALG00000000538 3985 1.733 - - - - 0.932 - 0.801 - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
12. EPB41L1 ENSGALG00000034171 3616 1.732 - - - - 0.929 - 0.803 - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
13. BCL9 ENSGALG00000037655 4620 1.702 - - - - 0.928 - 0.774 - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
14. HTRA3 ENSGALG00000034673 512 1.691 - - - - 0.933 - - 0.758 - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
15. CERCAM ENSGALG00000004986 5158 1.679 - - - - - 0.904 0.775 - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
16. LIPG ENSGALG00000043734 2490 1.667 - - 0.752 - - 0.915 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
17. ABCC1 ENSGALG00000006646 2596 1.651 - - - - 0.932 - 0.719 - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
18. SPIRE2 ENSGALG00000000521 26 1.617 - - - - - 0.817 - - - 0.800 spire type actin nucleation factor 2 [Source:HGNC Symbol;Acc:HGNC:30623]
19. GHOX-7 GHOX-7 2555 1.607 - - - - - 0.751 - - - 0.856
20. PTPRZ1 ENSGALG00000040114 3410 1.59 - - - 0.719 - 0.871 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
21. TRABD2A ENSGALG00000026395 704 1.589 - - - - - 0.778 - - - 0.811 TraB domain containing 2A, transcript variant X3
22. WNT4 ENSGALG00000041708 1277 1.583 - - - - - 0.831 0.752 - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
23. ENSGALG00000022967 ENSGALG00000022967 240 1.545 - - - - - 0.783 - - - 0.762
24. HOXA4 ENSGALG00000022622 22327 1.541 - - - - 0.834 0.707 - - - - homeobox A4 [Source:NCBI gene;Acc:395307]
25. SALL1 ENSGALG00000039238 3740 1.535 - - 0.752 - - - 0.783 - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
26. LFNG ENSGALG00000038515 5178 1.524 - - 0.765 - - 0.759 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
27. CSPG5 ENSGALG00000032184 991 1.493 - - - 0.729 - 0.764 - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
28. C17orf75 ENSGALG00000003434 4262 1.487 - - - - - 0.735 - - - 0.752 chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
29. NGFR ENSGALG00000035950 13452 1.487 - 0.704 - - 0.783 - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
30. HES6 ENSGALG00000028415 4830 1.481 - - - 0.701 - 0.780 - - - - hes family bHLH transcription factor 6
31. ENSGALG00000027373 ENSGALG00000027373 2129 1.458 - - - 0.744 - 0.714 - - - -
32. DCLK2 ENSGALG00000032386 2253 1.457 - - - - - 0.736 - - - 0.721 doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
33. ZEB1 ENSGALG00000007260 9277 0.96 - - - - 0.960 - - - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
34. CWC22 ENSGALG00000009001 5984 0.954 - - - - 0.954 - - - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
35. SEC63 ENSGALG00000015308 11596 0.953 - - - - 0.953 - - - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
36. RBM26 ENSGALG00000016910 13769 0.95 - - - - 0.950 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
37. FAM98A ENSGALG00000010428 9585 0.949 - - - - 0.949 - - - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
38. UQCRC2 ENSGALG00000002490 23477 0.947 - - - - 0.947 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
39. C15H12ORF49 C15H12ORF49 13250 0.946 - - - - 0.946 - - - - -
40. TNPO3 ENSGALG00000039420 5178 0.946 - - - - 0.946 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
41. HOXB3 ENSGALG00000043219 5198 0.946 - - - - 0.946 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
42. UBE2G2 ENSGALG00000005667 12689 0.943 - - - - 0.943 - - - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
43. VPS8 ENSGALG00000006704 5419 0.943 - - - - 0.943 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
44. RAE1 ENSGALG00000007653 8930 0.941 - - - - 0.941 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
45. NDST2 ENSGALG00000005107 4224 0.941 - - - - 0.941 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
46. PSMD14 ENSGALG00000011128 13335 0.94 - - - - 0.940 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
47. MRPL22 ENSGALG00000003919 2760 0.939 - - - - 0.939 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
48. MAP1B ENSGALG00000014999 6288 0.939 - - - - 0.939 - - - - - microtubule associated protein 1B
49. RILPL2 ENSGALG00000003321 5632 0.938 - - - - 0.938 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
50. OAF ENSGALG00000006715 12518 0.936 - - - - 0.936 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
51. EIF3L ENSGALG00000012296 42627 0.936 - - - - 0.936 - - - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
52. THBS1 ENSGALG00000009626 3521 0.935 - - - - 0.935 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
53. SPG21 ENSGALG00000007262 8050 0.934 - - - - 0.934 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
54. TM2D2 ENSGALG00000003356 7088 0.934 - - - - 0.934 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
55. MRPL46 ENSGALG00000006782 5033 0.934 - - - - 0.934 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
56. WHSC1L1 4065 0.933 - - - - 0.933 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
57. MYEOV2 MYEOV2 5155 0.933 - - - - 0.933 - - - - -
58. SEC61A2 ENSGALG00000036300 4235 0.933 - - - - 0.933 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
59. USP1 ENSGALG00000010957 8297 0.932 - - - - 0.932 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
60. gga-mir-6584 ENSGALG00000028834 1481 0.931 - - - - 0.931 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
61. NOL6 ENSGALG00000030730 7191 0.931 - - - - 0.931 - - - - - nucleolar protein 6
62. TBC1D7 ENSGALG00000012731 4891 0.931 - - - - 0.931 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
63. MED1 ENSGALG00000001708 9556 0.931 - - - - 0.931 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
64. SMNDC1 ENSGALG00000008561 14415 0.931 - - - - 0.931 - - - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
65. PPAPDC1B PPAPDC1B 6698 0.93 - - - - 0.930 - - - - -
66. CCDC59 ENSGALG00000028648 9272 0.929 - - - - 0.929 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
67. AGPAT3 ENSGALG00000031932 6903 0.929 - - - - 0.929 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
68. C4orf27 C4orf27 16724 0.928 - - - - 0.928 - - - - -
69. HYOU1 ENSGALG00000007659 3555 0.927 - - - - 0.927 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
70. IBA57 ENSGALG00000005328 4362 0.927 - - - - 0.927 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
71. TMEM39B ENSGALG00000003287 4125 0.927 - - - - 0.927 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
72. XRN2 ENSGALG00000008372 22164 0.927 - - - - 0.927 - - - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
73. CENPE ENSGALG00000013208 12337 0.926 - - - - 0.926 - - - - - centromere protein E, transcript variant X4
74. PGAM5 ENSGALG00000002137 7700 0.925 - - - - 0.925 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
75. BRP44L BRP44L 30452 0.925 - - - - 0.925 - - - - -
76. MRPS11 ENSGALG00000006777 16009 0.925 - - - - 0.925 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
77. PHKA1 ENSGALG00000004801 2510 0.924 - - - - 0.924 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
78. SAMM50 ENSGALG00000014194 20437 0.924 - - - - 0.924 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
79. TBRG4 ENSGALG00000038102 9269 0.924 - - - - 0.924 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
80. TMEM18 ENSGALG00000028744 11779 0.923 - - - - 0.923 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
81. EPFIP1L ENSGALG00000007683 18050 0.923 - - - - 0.923 - - - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
82. HMGB3 ENSGALG00000009071 12011 0.922 - - - - 0.922 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
83. LUC7L2 ENSGALG00000036238 11817 0.922 - - - - 0.922 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
84. KCTD9 ENSGALG00000000275 3455 0.921 - - - - 0.921 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
85. CREPT CREPT 17142 0.921 - - - - 0.921 - - - - -
86. DNAJC2 ENSGALG00000008249 28064 0.92 - - - - 0.920 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
87. MCM4 ENSGALG00000012915 13151 0.919 - - - - 0.919 - - - - - minichromosome maintenance complex component 4
88. ETF1 ENSGALG00000002262 14560 0.918 - - - - 0.918 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
89. TRIM33 ENSGALG00000001976 7404 0.918 - - - - 0.918 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
90. CDC5L ENSGALG00000016704 22893 0.916 - - - - 0.916 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
91. RAB21 ENSGALG00000010183 7718 0.914 - - - - 0.914 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
92. MORN4 ENSGALG00000006149 7772 0.913 - - - - 0.913 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
93. TCF7L2 ENSGALG00000008883 13688 0.911 - - - - 0.911 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
94. ABCF2 ENSGALG00000034573 15639 0.911 - - - - 0.911 - - - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
95. INCENP ENSGALG00000007537 16617 0.91 - - - - 0.910 - - - - - inner centromere protein [Source:NCBI gene;Acc:396270]
96. M6PR ENSGALG00000031681 9442 0.909 - - - - 0.909 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
97. MTF2 ENSGALG00000043087 15225 0.904 - - - - 0.904 - - - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
98. NUP37 ENSGALG00000012759 9985 0.903 - - - - 0.903 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
99. PUF60 ENSGALG00000039901 26902 0.902 - - - - 0.902 - - - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
100. ESRP2 ENSGALG00000003374 4436 0.899 - - - - 0.899 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]

There are 364 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA