Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PAX-6

Gene Name Gene ID Reads Annotation
PAX-6 PAX-6 2650











Genes with expression patterns similar to PAX-6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PAX-6 PAX-6 2650 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ENSGALG00000027373 ENSGALG00000027373 2129 6.26 - - 0.942 0.880 0.783 0.944 0.949 - 0.871 0.891
3. HES5 ENSGALG00000001141 6514 5.86 - - 0.895 0.881 0.932 0.841 0.795 - 0.785 0.731 hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
4. ENSGALG00000027002 ENSGALG00000027002 7570 5.24 - - 0.924 0.837 0.818 0.841 - - 0.895 0.925
5. PTPRZ1 ENSGALG00000040114 3410 5.061 - - 0.887 0.909 0.902 0.878 0.722 - - 0.763 protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
6. CRABP-I ENSGALG00000003193 67258 5.003 - - 0.846 0.838 0.763 0.832 - - 0.834 0.890 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
7. HES6 ENSGALG00000028415 4830 4.234 - - - 0.881 0.855 0.863 - - 0.760 0.875 hes family bHLH transcription factor 6
8. CRMP1B CRMP1B 18633 3.769 - - 0.720 0.776 0.760 - - 0.798 - 0.715
9. DBX1 ENSGALG00000003965 1432 3.333 - - 0.895 0.828 0.829 - 0.781 - - - developing brain homeobox 1 [Source:NCBI gene;Acc:422976]
10. ENPP2 ENSGALG00000032746 6086 3.241 - - - - - 0.943 - 0.704 0.701 0.893 ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
11. WSCD2 ENSGALG00000004849 477 3.203 - - 0.896 0.803 0.744 0.760 - - - - WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
12. CSPG5 ENSGALG00000032184 991 3.147 - - 0.812 0.823 0.767 - 0.745 - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
13. TAGLN3 ENSGALG00000015379 7865 2.999 - - 0.843 0.711 0.713 - - - - 0.732 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
14. CERCAM ENSGALG00000004986 5158 2.957 - - 0.716 - 0.734 0.801 - - 0.706 - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
15. OPTC ENSGALG00000003554 3698 2.627 - - 0.879 0.878 - 0.870 - - - - opticin [Source:NCBI gene;Acc:395130]
16. OTP ENSGALG00000026744 162 2.399 - - 0.792 - - - - - 0.748 0.859 orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
17. PROCA1 668 2.351 - - 0.830 - 0.715 0.806 - - - - protein interacting with cyclin A1
18. PRDM8 ENSGALG00000038372 928 2.279 - - 0.773 0.727 - - - - - 0.779 PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
19. ENSGALG00000022967 ENSGALG00000022967 240 2.257 - - 0.805 0.742 - 0.710 - - - -
20. PRDM12 ENSGALG00000003895 35 1.683 - - - - - 0.793 - - - 0.890 PR/SET domain 12 [Source:HGNC Symbol;Acc:HGNC:13997]
21. DLL1 ENSGALG00000011182 1613 1.664 - - - 0.849 - - - - - 0.815 delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
22. SOHO-1 ENSGALG00000015599 110 1.648 - - - - - - - - 0.817 0.831 sensory organ homeobox protein SOHo [Source:NCBI gene;Acc:396346]
23. FGFR3 ENSGALG00000015708 16853 1.646 - - - - - 0.910 - - - 0.736 fibroblast growth factor receptor 3 [Source:NCBI gene;Acc:396515]
24. LASP-2 LASP-2 4415 1.612 - - 0.789 - - 0.823 - - - -
25. ZNF488 ENSGALG00000005975 82 1.572 - - - - - 0.741 - - - 0.831 zinc finger protein 488, transcript variant X2
26. HOXD4 ENSGALG00000023419 6073 1.567 - - - 0.765 0.802 - - - - - homeobox D4 [Source:NCBI gene;Acc:424139]
27. NEFM ENSGALG00000000317 6992 1.551 - - - - 0.736 0.815 - - - - neurofilament medium [Source:NCBI gene;Acc:396206]
28. PPP1R17 ENSGALG00000036390 2418 1.54 - - - - - - - - 0.829 0.711 protein phosphatase 1 regulatory subunit 17 [Source:HGNC Symbol;Acc:HGNC:16973]
29. ZIC1 ENSGALG00000040532 6543 1.532 - - 0.734 0.798 - - - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
30. EVX1 ENSGALG00000037310 1974 1.527 - - 0.774 - - - - - 0.753 - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
31. ID1 ENSGALG00000034661 44524 1.515 - - 0.794 - - - - - 0.721 - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
32. MARCKSL1 ENSGALG00000032335 88728 1.509 - - - 0.745 - 0.764 - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
33. SLC35F1 ENSGALG00000029011 14728 1.5 - - - - - 0.735 - - - 0.765 solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
34. RGMA ENSGALG00000039173 12874 1.478 - - - - - 0.754 - - - 0.724 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
35. GNG10 ENSGALG00000015683 6905 1.472 - - 0.760 - 0.712 - - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
36. DBX2 ENSGALG00000009604 367 1.47 - - - 0.701 - - - - - 0.769 developing brain homeobox 2 [Source:NCBI gene;Acc:417801]
37. LOC419390 ENSGALG00000001136 607 1.455 - - 0.729 - - 0.726 - - - - hairy and enhancer of split 5-like, transcript variant X1
38. GDPD4 ENSGALG00000000690 824 1.451 - - - - 0.704 0.747 - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
39. GABRG2 ENSGALG00000038042 211 1.446 - - 0.726 0.720 - - - - - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
40. NHLH1 ENSGALG00000025817 1617 1.441 - - 0.729 - - - - - 0.712 - nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
41. SRGAP3 ENSGALG00000008378 4331 1.412 - - - - 0.708 - - - 0.704 - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
42. ZMYM4 ENSGALG00000002499 435 1 - - - - - - - 1.000 - - zinc finger MYM-type containing 4, transcript variant X1
43. DOCK8 481 1 - - - - - - - 1.000 - - dedicator of cytokinesis 8, transcript variant X1
44. SNCAIP ENSGALG00000005330 2425 0.999 - - - - - - - 0.999 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
45. ENSGALG00000026930 ENSGALG00000026930 681 0.999 - - - - - - - 0.999 - -
46. FBXW8 ENSGALG00000008207 1639 0.999 - - - - - - - 0.999 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
47. TMEM100 ENSGALG00000026465 1785 0.999 - - - - - - - 0.999 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
48. FGFRL1 ENSGALG00000037525 1687 0.999 - - - - - - - 0.999 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
49. TECPR2 ENSGALG00000011373 1063 0.999 - - - - - - - 0.999 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
50. NFASC ENSGALG00000031776 4264 0.999 - - - - - - - 0.999 - - neurofascin [Source:NCBI gene;Acc:419824]
51. ADARB1 ENSGALG00000007527 2480 0.998 - - - - - - - 0.998 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
52. RBM6 ENSGALG00000035578 1690 0.998 - - - - - - - 0.998 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
53. ANKRD17 ENSGALG00000011642 3192 0.998 - - - - - - - 0.998 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
54. PPT1 ENSGALG00000003936 2540 0.996 - - - - - - - 0.996 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
55. NAA50 ENSGALG00000033889 3551 0.996 - - - - - - - 0.996 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
56. gga-mir-1787 ENSGALG00000025542 1373 0.995 - - - - - - - 0.995 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
57. PGS1 ENSGALG00000007181 3187 0.995 - - - - - - - 0.995 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
58. PTPN11 ENSGALG00000004821 2658 0.994 - - - - - - - 0.994 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
59. VPS13B 2293 0.994 - - - - - - - 0.994 - - vacuolar protein sorting 13 homolog B
60. KIAA1432 KIAA1432 1792 0.994 - - - - - - - 0.994 - -
61. H2AFY_1 ENSGALG00000040141 4895 0.993 - - - - - - - 0.993 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
62. DENND5B 4077 0.993 - - - - - - - 0.993 - - DENN domain containing 5B, transcript variant X1
63. EPS15 ENSGALG00000010543 1598 0.993 - - - - - - - 0.993 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
64. EED ENSGALG00000014060 6467 0.989 - - - - - - - 0.989 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
65. MB21D1 2460 0.989 - - - - - - - 0.989 - - Mab-21 domain containing 1
66. RPAP1 ENSGALG00000008624 3522 0.988 - - - - - - - 0.988 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
67. MTRF1 ENSGALG00000016951 3983 0.987 - - - - - - - 0.987 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
68. CMC1 ENSGALG00000025811 3939 0.986 - - - - - - - 0.986 - - C-X9-C motif containing 1
69. PRORSD1P ENSGALG00000034854 2924 0.986 - - - - - - - 0.986 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
70. FAS ENSGALG00000006351 461 0.986 - - - - - - - 0.986 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
71. KNOP1 ENSGALG00000002042 6251 0.983 - - - - - - - 0.983 - - lysine-rich nucleolar protein 1, transcript variant X1
72. RIOK1 ENSGALG00000012795 4658 0.983 - - - - - - - 0.983 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
73. ACAP2 ENSGALG00000007040 4182 0.983 - - - - - - - 0.983 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
74. KCTD9 ENSGALG00000000275 3455 0.982 - - - - - - - 0.982 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
75. QARS ENSGALG00000029980 4207 0.981 - - - - - - - 0.981 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
76. LIN7C ENSGALG00000012170 5043 0.98 - - - - - - - 0.980 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
77. ADD1 ENSGALG00000015664 6828 0.979 - - - - - - - 0.979 - - adducin 1 [Source:NCBI gene;Acc:422882]
78. ATP8B1 ENSGALG00000030834 521 0.976 - - - - - - - 0.976 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
79. DDHD1 ENSGALG00000012426 6068 0.976 - - - - - - - 0.976 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
80. KDM4B ENSGALG00000034592 6711 0.976 - - - - - - - 0.976 - - lysine demethylase 4B, transcript variant X8
81. RHOT1 ENSGALG00000003397 5149 0.975 - - - - - - - 0.975 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
82. VRK1 ENSGALG00000011116 4524 0.974 - - - - - - - 0.974 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
83. OMA1 ENSGALG00000010861 3328 0.973 - - - - - - - 0.973 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
84. LMNB2 ENSGALG00000000470 4364 0.971 - - - - - - - 0.971 - - lamin B2 [Source:NCBI gene;Acc:396222]
85. MAK16 ENSGALG00000001663 7455 0.97 - - - - - - - 0.970 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
86. HDHD2 ENSGALG00000034801 6373 0.969 - - - - - - - 0.969 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
87. C3H2ORF43 C3H2ORF43 5628 0.969 - - - - - - - 0.969 - -
88. LGALS1 ENSGALG00000012420 13993 0.968 - - - - - - - 0.968 - - galectin 1 [Source:NCBI gene;Acc:396491]
89. PACSIN3 ENSGALG00000008231 5423 0.966 - - - - - - - 0.966 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
90. FKBP15 ENSGALG00000008838 3677 0.962 - - - - - - - 0.962 - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
91. SNAPC5 ENSGALG00000007695 4117 0.959 - - - - - - - 0.959 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
92. FAM192A ENSGALG00000021473 10213 0.957 - - - - - - - 0.957 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
93. MED10 ENSGALG00000028336 9343 0.954 - - - - - - - 0.954 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
94. CHN1 ENSGALG00000009293 6415 0.954 - - - - - - - 0.954 - - chimerin 1 [Source:NCBI gene;Acc:429021]
95. RAB6A ENSGALG00000017320 10569 0.948 - - - - - - - 0.948 - - RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]
96. ACADSB ENSGALG00000041417 7710 0.948 - - - - - - - 0.948 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
97. RNF10 ENSGALG00000036417 8027 0.947 - - - - - - - 0.947 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
98. MRPL48 ENSGALG00000017319 9773 0.945 - - - - - - - 0.945 - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
99. UFD1L 12964 0.942 - - - - - - - 0.942 - - ubiquitin fusion degradation 1 like (yeast)
100. NFI1 NFI1 6210 0.941 - - - - - - - 0.941 - -

There are 117 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA