Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PARVB

Gene Name Gene ID Reads Annotation
PARVB ENSGALG00000014201 27559 parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]











Genes with expression patterns similar to PARVB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PARVB ENSGALG00000014201 27559 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
2. SSR2 ENSGALG00000000764 32190 2.229 - - - 0.738 0.729 - - - - 0.762 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
3. ABCC10 2213 1.587 - - - - - - 0.854 - 0.733 - ATP binding cassette subfamily C member 10, transcript variant X10
4. M6PR ENSGALG00000031681 9442 1.577 - - - - - - 0.850 - - 0.727 mannose-6-phosphate receptor, cation dependent, transcript variant X3
5. USP10 ENSGALG00000005674 7768 1.57 - - - - 0.840 - - - - 0.730 ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
6. BTG1L ENSGALG00000004676 2293 1.566 - - - 0.785 - - - - - 0.781 protein BTG1-like
7. ITGA9 ENSGALG00000029378 415 1.559 - - - 0.779 - - - - - 0.780 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
8. INTS10 ENSGALG00000010130 6320 1.535 - - - 0.754 - - - - - 0.781 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
9. PNRC2 ENSGALG00000004122 19228 1.515 - - - - 0.701 - - - - 0.814 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
10. PPFIA1 ENSGALG00000035774 5258 1.495 - - - 0.755 - - - - - 0.740 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
11. FANCL ENSGALG00000030022 7423 1.488 - - 0.776 - - - - - - 0.712 FA complementation group L [Source:NCBI gene;Acc:421202]
12. GFPT1 ENSGALG00000036391 14025 1.483 - - - 0.764 0.719 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
13. EAPP ENSGALG00000010007 5080 1.478 - - - - 0.735 - - - - 0.743 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
14. ATP2A2 ENSGALG00000032287 12734 1.478 - - - - 0.713 - 0.765 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
15. TRAPPC12 ENSGALG00000016387 2593 1.477 - - - 0.751 0.726 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
16. CRCP ENSGALG00000002587 8809 1.458 - - - - - - - - 0.714 0.744 CGRP receptor component [Source:NCBI gene;Acc:396022]
17. TK2 ENSGALG00000034216 5394 1.445 - - - 0.728 0.717 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
18. ASB9 ENSGALG00000016563 2780 1.441 - - - 0.715 - - - - - 0.726 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
19. PGD ENSGALG00000002797 15115 1.429 - - - 0.724 - - - - - 0.705 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
20. ALDH1A2 ENSGALG00000004270 49483 0.902 - - - - - - 0.902 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
21. NSA2 ENSGALG00000014942 45193 0.885 - - - - 0.885 - - - - - NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
22. MAU2 ENSGALG00000002969 10604 0.875 - - - - - - 0.875 - - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
23. PURH PURH 28410 0.874 - - - - - - 0.874 - - -
24. SUMO3 ENSGALG00000032783 47823 0.868 - - - - - - 0.868 - - - small ubiquitin-like modifier 3 [Source:NCBI gene;Acc:770553]
25. NUDC ENSGALG00000000895 17844 0.859 - - - - 0.859 - - - - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
26. TMEM62 ENSGALG00000009260 1170 0.854 - - - - - - 0.854 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
27. TMC1 ENSGALG00000015145 1180 0.854 - - - - - - 0.854 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
28. TMEM97 ENSGALG00000005702 2037 0.854 - - - - - - 0.854 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
29. BMP3 ENSGALG00000035052 3260 0.854 - - - - - - 0.854 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
30. TMEM120B ENSGALG00000004254 2819 0.853 - - - - - - 0.853 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
31. PTBP2 ENSGALG00000005552 3443 0.853 - - - - - - 0.853 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
32. CAND1 4541 0.853 - - - - - - 0.853 - - - cullin associated and neddylation dissociated 1
33. ENSGALG00000014190 ENSGALG00000014190 5735 0.853 - - - - - - 0.853 - - -
34. CTU2 4818 0.852 - - - - - - 0.852 - - - cytosolic thiouridylase subunit 2, transcript variant X3
35. EGFLAM ENSGALG00000003726 4588 0.852 - - - - - - 0.852 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
36. POLR1C ENSGALG00000010349 7059 0.851 - - - - - - 0.851 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
37. MRPL32 ENSGALG00000037258 6861 0.851 - - - - - - 0.851 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
38. HOXD8 ENSGALG00000037272 4338 0.85 - - - - - - 0.850 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
39. BTG1 ENSGALG00000011276 17496 0.85 - - - - 0.850 - - - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
40. PHGDH ENSGALG00000002988 6912 0.847 - - - - - - 0.847 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
41. DDX18 ENSGALG00000012147 12463 0.847 - - - - 0.847 - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
42. MOB3A ENSGALG00000031729 9690 0.847 - - - - - - 0.847 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
43. ENSGALG00000004773 ENSGALG00000004773 10418 0.846 - - - - - - 0.846 - - -
44. ARID4B ENSGALG00000034003 5364 0.845 - - - - 0.845 - - - - - AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
45. IMP4 ENSGALG00000029152 11669 0.845 - - - - - - 0.845 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
46. CEP70 ENSGALG00000012087 7992 0.843 - - - - 0.843 - - - - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
47. POLR2D ENSGALG00000002057 14548 0.842 - - - - - - 0.842 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
48. CHNTHL1 CHNTHL1 4976 0.842 - - - - - - 0.842 - - -
49. EIF3J ENSGALG00000008187 43570 0.841 - - - - - - 0.841 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
50. MCM2 ENSGALG00000006037 13458 0.841 - - - - - - 0.841 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
51. ITGA1 ENSGALG00000014891 11378 0.838 - - - - - - 0.838 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
52. PFDN4 ENSGALG00000007792 26514 0.835 - - - - - - 0.835 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
53. PRDX6 ENSGALG00000003053 17928 0.835 - - - - - - 0.835 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
54. DDX21 ENSGALG00000004144 13105 0.833 - - - - - - 0.833 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
55. FAM53A ENSGALG00000015713 3795 0.832 - - - - 0.832 - - - - - family with sequence similarity 53 member A [Source:NCBI gene;Acc:378905]
56. FBN3 ENSGALG00000037625 23313 0.832 - - - - - - 0.832 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
57. FAM103A1 17380 0.829 - - - - - - 0.829 - - - family with sequence similarity 103 member A1, transcript variant X2
58. ATP5MC1 ENSGALG00000001330 37766 0.829 - - - - - - 0.829 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
59. DYNLL2 ENSGALG00000005522 17107 0.828 - - - - - - 0.828 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
60. TMOD1 ENSGALG00000002125 933 0.824 - - - 0.824 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
61. GPBP1L1 ENSGALG00000010276 10253 0.821 - - - - - - 0.821 - - - GC-rich promoter binding protein 1 like 1 [Source:NCBI gene;Acc:424603]
62. RPL26 RPL26 343071 0.82 - - - - - - - - - 0.820
63. SMC2 ENSGALG00000015691 34013 0.816 - - - - - - 0.816 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
64. RPL7A ENSGALG00000003197 353903 0.816 - - - - 0.816 - - - - - ribosomal protein L7a [Source:NCBI gene;Acc:417158]
65. TBK1 ENSGALG00000009840 1650 0.816 - - - 0.816 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
66. C15H12ORF49 C15H12ORF49 13250 0.815 - - - - - - - 0.815 - -
67. DENR ENSGALG00000003795 30805 0.815 - - - - - - 0.815 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
68. SUMO1 ENSGALG00000008435 19847 0.813 - - - 0.813 - - - - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
69. VWA9 ENSGALG00000007491 4790 0.812 - - - - - - - - - 0.812 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
70. ASCC1 ENSGALG00000026019 3583 0.812 - - - 0.812 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
71. SLC1A3 ENSGALG00000003582 2283 0.812 - - - - 0.812 - - - - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
72. C9orf89 C9orf89 3056 0.811 - - - - - - - - - 0.811
73. ENSGALG00000027884 ENSGALG00000027884 20249 0.811 - - - 0.811 - - - - - -
74. C1orf198 ENSGALG00000026600 5651 0.811 - - - - - - - - - 0.811 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
75. ADCY9 ENSGALG00000007779 766 0.811 - - - 0.811 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
76. KIAA1432 KIAA1432 1792 0.81 - - - 0.810 - - - - - -
77. ZBTB17 ENSGALG00000035352 280 0.81 - - - 0.810 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
78. ENSGALG00000027412 ENSGALG00000027412 202 0.809 - - - 0.809 - - - - - -
79. KIAA1462 1612 0.808 - - - 0.808 - - - - - - KIAA1462, transcript variant X4
80. VWDE ENSGALG00000042443 160 0.807 - - - 0.807 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
81. KIN ENSGALG00000030702 1608 0.807 - - - 0.807 - - - - - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
82. MLH3 ENSGALG00000010304 231 0.807 - - - 0.807 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
83. SLC39A6 ENSGALG00000013209 1754 0.806 - - - - - - - - - 0.806 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
84. PDE4B ENSGALG00000011094 1871 0.805 - - - 0.805 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
85. DDX1 ENSGALG00000016461 15157 0.804 - - - - - - - - - 0.804 DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
86. WDR96 WDR96 255 0.804 - - - 0.804 - - - - - -
87. GPI ENSGALG00000004956 40030 0.804 - - - - - - - - - 0.804 glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
88. ABRACL ENSGALG00000013826 19445 0.803 - - - - - - - - - 0.803 ABRA C-terminal like [Source:NCBI gene;Acc:770205]
89. SNORA31 SNORA31 183 0.802 - - - 0.802 - - - - - -
90. NUP107 ENSGALG00000009934 2097 0.801 - - - - - - - - - 0.801 nucleoporin 107 [Source:NCBI gene;Acc:101751988]
91. GORASP1 ENSGALG00000006033 4033 0.801 - - - - - - - - - 0.801 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
92. EDN3 ENSGALG00000040880 1061 0.8 - - - 0.800 - - - - - - endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]
93. TRIM62 ENSGALG00000028437 5124 0.8 - - - 0.800 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
94. FRRS1 ENSGALG00000005418 332 0.799 - - - 0.799 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
95. TBC1D30 ENSGALG00000009859 994 0.799 - - - 0.799 - - - - - - TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
96. CA3 CA3 200 0.799 - - - 0.799 - - - - - -
97. ZCCHC2 ENSGALG00000012889 3163 0.798 - - - 0.798 - - - - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
98. C1orf21 ENSGALG00000020922 4035 0.795 - - - 0.795 - - - - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
99. FAM211B FAM211B 3808 0.795 - - - 0.795 - - - - - -
100. IFT43 ENSGALG00000020415 1218 0.794 - - - 0.794 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]

There are 465 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA