Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PARP1

Gene Name Gene ID Reads Annotation
PARP1 ENSGALG00000009228 39433 poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]











Genes with expression patterns similar to PARP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PARP1 ENSGALG00000009228 39433 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
2. PLAA ENSGALG00000001782 5459 1.627 - - - 0.796 - - 0.831 - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
3. FARSB ENSGALG00000005236 10738 1.599 - - - - - - 0.840 0.759 - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
4. COMMD10 ENSGALG00000002308 7442 1.584 - - - 0.790 - - 0.794 - - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
5. ESF1 ENSGALG00000034768 8610 1.535 0.720 - - - - - 0.815 - - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
6. RBBP6 ENSGALG00000006043 9708 1.488 0.772 0.716 - - - - - - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
7. SP3 ENSGALG00000031796 8997 1.48 0.731 - - - - - 0.749 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
8. NHP2L1 NHP2L1 12124 1.469 0.711 - - - - - 0.758 - - -
9. AKT1 ENSGALG00000011620 4089 1.468 - - - 0.744 - - 0.724 - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
10. SURF6 ENSGALG00000038413 11178 1.453 0.735 - - - - - 0.718 - - - surfeit 6 [Source:NCBI gene;Acc:417160]
11. MOSPD1 ENSGALG00000006132 8503 1.449 - - - 0.703 - - 0.746 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
12. FAM133B 9239 1.448 - - - 0.708 - - 0.740 - - - family with sequence similarity 133 member B
13. VCAN ENSGALG00000015624 11489 1.444 0.705 - - 0.739 - - - - - - versican [Source:NCBI gene;Acc:395565]
14. PPFIA1 ENSGALG00000035774 5258 1.439 - - - 0.719 - - 0.720 - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
15. MRPS7 ENSGALG00000007999 5445 1.428 - - - 0.716 - - 0.712 - - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
16. SREK1 ENSGALG00000014775 13961 1.425 0.717 - - - - - 0.708 - - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
17. GLO1 ENSGALG00000010127 31662 0.945 - - - - - - 0.945 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
18. YWHAZ ENSGALG00000031387 84985 0.936 - - - - - - 0.936 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
19. EIF4A2 ENSGALG00000008684 58507 0.934 - - - - - - 0.934 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
20. HMGB2 ENSGALG00000010745 89235 0.933 - - - - - - 0.933 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
21. RABGGTB ENSGALG00000011388 11654 0.924 - - - - - - 0.924 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
22. MRPL20 ENSGALG00000001542 28764 0.924 - - - - - - 0.924 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
23. EIF2S1 ENSGALG00000009565 63906 0.921 - - - - - - 0.921 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
24. TMED7 ENSGALG00000028484 21008 0.913 - - - - - - 0.913 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
25. RANBP1 ENSGALG00000002107 17715 0.91 - - - - - - 0.910 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
26. KDELR2 ENSGALG00000040793 29669 0.908 - - - - - - 0.908 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
27. NDUFA12 ENSGALG00000011325 19807 0.906 - - - - - - 0.906 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
28. KIF2C ENSGALG00000010120 8999 0.906 - - - - - - 0.906 - - - kinesin family member 2C, transcript variant X1
29. CSE1L ENSGALG00000004707 20653 0.905 - - - - - - 0.905 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
30. AIMP2 ENSGALG00000003400 12655 0.905 - - - - - - 0.905 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
31. GLRX3 ENSGALG00000010464 22578 0.904 - - - - - - 0.904 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
32. PPIH ENSGALG00000004874 25558 0.9 - - - - - - 0.900 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
33. EBNA1BP2 ENSGALG00000009045 17453 0.9 - - - - - - 0.900 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
34. SIKE1 ENSGALG00000002147 20836 0.899 - - - - - - 0.899 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
35. HSPA4 ENSGALG00000040882 20966 0.898 - - - - - - 0.898 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
36. FCF1 ENSGALG00000010275 24928 0.898 - - - - - - 0.898 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
37. UBE2V1 ENSGALG00000008015 17947 0.897 - - - - - - 0.897 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
38. DERL1 ENSGALG00000033950 15074 0.895 - - - - - - 0.895 - - - derlin 1 [Source:NCBI gene;Acc:420350]
39. DKC1 ENSGALG00000005054 30350 0.895 - - - - - - 0.895 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
40. C1H12ORF23 C1H12ORF23 13234 0.894 - - - - - - 0.894 - - -
41. PPP1R7 ENSGALG00000031766 22187 0.893 - - - - - - 0.893 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
42. LSM5 ENSGALG00000041625 22307 0.892 - - - - - - 0.892 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
43. SSR3 ENSGALG00000028683 24334 0.889 - - - - - - 0.889 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
44. MAP3K7 ENSGALG00000015596 15164 0.889 - - - - - - 0.889 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
45. EIF2B EIF2B 28702 0.889 - - - - - - 0.889 - - -
46. RUVBL1 ENSGALG00000005931 9379 0.889 - - - - - - 0.889 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
47. ENSGALG00000017396 ENSGALG00000017396 9028 0.888 - - - - - - 0.888 - - -
48. TERF2 ENSGALG00000000657 7865 0.887 - - - - - - 0.887 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
49. ASUN ASUN 17129 0.885 - - - - - - 0.885 - - -
50. SMC4 ENSGALG00000009553 15715 0.884 - - - - - - 0.884 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
51. PSMD12 ENSGALG00000026225 17473 0.884 - - - - - - 0.884 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
52. SIVA1 ENSGALG00000011619 15130 0.884 - - - - - - 0.884 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
53. CASP3 ENSGALG00000010638 11572 0.883 - - - - - - 0.883 - - - caspase 3 [Source:NCBI gene;Acc:395476]
54. SMARCA5 ENSGALG00000009913 20059 0.882 - - - - - - 0.882 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
55. TMEM30A ENSGALG00000015904 8533 0.882 - - - - - - 0.882 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
56. SLC25A3 ENSGALG00000011514 62606 0.882 - - - - - - 0.882 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
57. RIOK2 ENSGALG00000015288 6280 0.882 - - - - - - 0.882 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
58. KDM5B ENSGALG00000038948 50645 0.88 - - - - - - 0.880 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
59. RBM17 ENSGALG00000006332 12656 0.88 - - - - - - 0.880 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
60. RAD21 ENSGALG00000029523 25658 0.88 - - - - - - 0.880 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
61. LLPH ENSGALG00000019358 20976 0.879 - - - - - - 0.879 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
62. MORF4L1 ENSGALG00000008146 29940 0.878 - - - - - - 0.878 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
63. RSL1D1 ENSGALG00000033690 13638 0.876 - - - - - - 0.876 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
64. DGCR2 ENSGALG00000005891 8405 0.876 - - - - - - 0.876 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
65. SKP2 ENSGALG00000003547 14637 0.873 - - - - - - 0.873 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
66. SEC11A ENSGALG00000037553 32123 0.872 - - - - - - 0.872 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
67. PREP ENSGALG00000015405 17050 0.872 - - - - - - 0.872 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
68. ATP2B1 ENSGALG00000030550 15123 0.871 - - - - - - 0.871 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
69. METAP2 ENSGALG00000011377 16311 0.871 - - - - - - 0.871 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
70. POLR1E ENSGALG00000005395 8953 0.87 - - - - - - 0.870 - - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
71. QTRTD1 QTRTD1 10765 0.87 - - - - - - 0.870 - - -
72. PSMB2 ENSGALG00000026421 51885 0.87 - - - - - - 0.870 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
73. BIRC6 ENSGALG00000010541 7999 0.87 - - - - - - 0.870 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
74. R3HDM1 ENSGALG00000012246 6580 0.87 - - - - - - 0.870 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
75. RPL36AL ENSGALG00000004952 205590 0.869 - - - - - - 0.869 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
76. TXNDC17 ENSGALG00000027950 45004 0.869 - - - - - - 0.869 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
77. RFC1 ENSGALG00000014298 6516 0.869 - - - - - - 0.869 - - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
78. HCCS ENSGALG00000005571 4939 0.868 - - - - - - 0.868 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
79. EGLN1 ENSGALG00000041422 11032 0.867 - - - - - - 0.867 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
80. KLHDC4 ENSGALG00000037315 9828 0.867 - - - - - - 0.867 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
81. FKBP12 FKBP12 64317 0.867 - - - - - - 0.867 - - -
82. AZIN1 ENSGALG00000029295 11085 0.866 - - - - - - 0.866 - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
83. RANGAP1 ENSGALG00000011966 20170 0.866 - - - - - - 0.866 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
84. AP2A2 ENSGALG00000006799 13874 0.865 - - - - - - 0.865 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
85. C11H16ORF80 C11H16ORF80 18673 0.864 - - - - - - 0.864 - - -
86. EIF3B ENSGALG00000040999 49971 0.864 - - - - - - 0.864 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
87. TTC37 ENSGALG00000014670 5715 0.864 - - - - - - 0.864 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
88. UQCRC2 ENSGALG00000002490 23477 0.863 - - - - - - 0.863 - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
89. MRPL54 ENSGALG00000027611 39450 0.863 - - - - - - 0.863 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
90. ZNF593 ENSGALG00000000542 79105 0.863 - - - - - - 0.863 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
91. RBBP4 ENSGALG00000003522 72455 0.863 - - - - - - 0.863 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
92. ENSGALG00000009044 ENSGALG00000009044 14492 0.862 - - - - - - 0.862 - - -
93. TET1 ENSGALG00000031604 13002 0.862 - - - - - - 0.862 - - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
94. HDDC2 ENSGALG00000014841 7674 0.862 - - - - - - 0.862 - - - HD domain containing 2 [Source:NCBI gene;Acc:421719]
95. NAA38 ENSGALG00000045783 11229 0.862 - - - - - - 0.862 - - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
96. GLI3 ENSGALG00000040266 9981 0.862 - - - - - - 0.862 - - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
97. PTP4A2 ENSGALG00000003265 24826 0.861 - - - - - - 0.861 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
98. NUP37 ENSGALG00000012759 9985 0.861 - - - - - - 0.861 - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
99. INTS2 ENSGALG00000005269 6966 0.861 - - - - - - 0.861 - - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
100. SNRNP40 ENSGALG00000000615 32298 0.861 - - - - - - 0.861 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]

There are 1014 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA