Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PAPD7

Gene Name Gene ID Reads Annotation
PAPD7 ENSGALG00000013061 2031 poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]











Genes with expression patterns similar to PAPD7

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PAPD7 ENSGALG00000013061 2031 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
2. RIT1 ENSGALG00000014647 7174 1.554 - - - - - - 0.845 0.709 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
3. COIL ENSGALG00000003158 7806 1.486 - - - - - - 0.785 0.701 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
4. BMI1 ENSGALG00000041267 6618 0.934 - - - - - - 0.934 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
5. PARL ENSGALG00000002315 15943 0.93 - - - - - - 0.930 - - - presenilin associated rhomboid like
6. MBTPS1 ENSGALG00000003293 4843 0.927 - - - - - - 0.927 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
7. ENSGALG00000028164 ENSGALG00000028164 3325 0.922 - - - - - - 0.922 - - -
8. WIPI1 ENSGALG00000004215 3359 0.922 - - - - - - 0.922 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
9. CDC42SE2 ENSGALG00000027258 4725 0.917 - - - - - - 0.917 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
10. FTSJ2 FTSJ2 2951 0.916 - - - - - - 0.916 - - -
11. NEK4 ENSGALG00000041428 4473 0.915 - - - - - - 0.915 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
12. TOP3B ENSGALG00000030051 5953 0.91 - - - - - - 0.910 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
13. SELM SELM 6366 0.909 - - - - - - 0.909 - - -
14. NCAPG2 ENSGALG00000006525 2319 0.908 - - - - - - 0.908 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
15. MGLL ENSGALG00000032736 612 0.906 - - - - - - 0.906 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
16. COPS8 ENSGALG00000033385 10166 0.905 - - - - - - 0.905 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
17. PEX16 ENSGALG00000008421 3684 0.904 - - - - - - 0.904 - - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
18. TM2D3 ENSGALG00000026271 2566 0.903 - - - - - - 0.903 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
19. IK ENSGALG00000037172 12100 0.903 - - - - - - 0.903 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
20. CDC73 ENSGALG00000002469 4586 0.902 - - - - - - 0.902 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
21. RPS19BP1 ENSGALG00000029810 5768 0.901 - - - - - - 0.901 - - - ribosomal protein S19 binding protein 1 [Source:NCBI gene;Acc:418011]
22. SPG11 ENSGALG00000008180 1890 0.9 - - - - - - 0.900 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
23. PKN3 532 0.9 - - - - - - 0.900 - - - protein kinase N3, transcript variant X2
24. NPHP4 ENSGALG00000000966 1698 0.898 - - - - - - 0.898 - - - nephrocystin 4, transcript variant X5
25. SGSM3 ENSGALG00000012033 1839 0.896 - - - - - - 0.896 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
26. SRP72 ENSGALG00000011403 13666 0.895 - - - - - - 0.895 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
27. PGAP2 ENSGALG00000027762 2583 0.894 - - - - - - 0.894 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
28. MED16 ENSGALG00000001978 2387 0.894 - - - - - - 0.894 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
29. USP20 ENSGALG00000041104 3186 0.893 - - - - - - 0.893 - - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
30. C14orf80 C14orf80 1921 0.892 - - - - - - 0.892 - - -
31. FAM57A ENSGALG00000004820 1492 0.892 - - - - - - 0.892 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
32. SUN1 ENSGALG00000003781 3442 0.892 - - - - - - 0.892 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
33. CMSS1 ENSGALG00000015267 2954 0.891 - - - - - - 0.891 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
34. ENSGALG00000002852 ENSGALG00000002852 2687 0.889 - - - - - - 0.889 - - -
35. NT5C2 ENSGALG00000008179 1760 0.889 - - - - - - 0.889 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
36. ZFYVE19 ENSGALG00000008460 2750 0.889 - - - - - - 0.889 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
37. CCNL1 ENSGALG00000009699 1033 0.888 - - - - - - 0.888 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
38. NUP205 ENSGALG00000011662 4157 0.888 - - - - - - 0.888 - - - nucleoporin 205
39. ERMP1 ENSGALG00000000438 1136 0.887 - - - - - - 0.887 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
40. MTDH ENSGALG00000034050 9525 0.887 - - - - - - 0.887 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
41. CCNE2 ENSGALG00000040794 1229 0.886 - - - - - - 0.886 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
42. SPAG9 ENSGALG00000034001 2314 0.886 - - - - - - 0.886 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
43. ALDH18A1 ENSGALG00000034655 3038 0.884 - - - - - - 0.884 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
44. FAM193A ENSGALG00000015667 3075 0.884 - - - - - - 0.884 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
45. NIN ENSGALG00000012361 2284 0.884 - - - - - - 0.884 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
46. ROR1 ENSGALG00000011019 2155 0.883 - - - - - - 0.883 - - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
47. MRPL10 ENSGALG00000014387 12386 0.883 - - - - - - 0.883 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
48. CLDND1 ENSGALG00000039538 5048 0.883 - - - - - - 0.883 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
49. TMEM135 2283 0.883 - - - - - - 0.883 - - - transmembrane protein 135, transcript variant X4
50. CANX ENSGALG00000032148 11297 0.883 - - - - - - 0.883 - - - calnexin [Source:NCBI gene;Acc:416288]
51. NDRG3 ENSGALG00000001492 5919 0.883 - - - - - - 0.883 - - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
52. MST1 ENSGALG00000002722 994 0.882 - - - - - - 0.882 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
53. ASB6 ENSGALG00000004378 1080 0.882 - - - - - - 0.882 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
54. HTATSF1 ENSGALG00000006410 3526 0.882 - - - - - - 0.882 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
55. DIEXF ENSGALG00000009887 4782 0.882 - - - - - - 0.882 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
56. GGA.8379 GGA.8379 4419 0.882 - - - - - - 0.882 - - -
57. GGCT ENSGALG00000030552 3446 0.881 - - - - - - 0.881 - - - gamma-glutamylcyclotransferase
58. SCAF4 ENSGALG00000033965 2027 0.881 - - - - - - 0.881 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
59. GAS6 ENSGALG00000016820 481 0.88 - - - - - - 0.880 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
60. DNAJC12 ENSGALG00000002769 1418 0.879 - - - - - - 0.879 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
61. LONP1 ENSGALG00000040492 7133 0.879 - - - - - - 0.879 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
62. PDHX ENSGALG00000033753 2799 0.878 - - - - - - 0.878 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
63. SDK2 ENSGALG00000031895 2682 0.877 - - - - - - 0.877 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
64. DNPEP ENSGALG00000011318 10623 0.877 - - - - - - 0.877 - - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
65. EIF3I ENSGALG00000003337 28832 0.877 - - - - - - 0.877 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
66. USP54 ENSGALG00000005232 2749 0.876 - - - - - - 0.876 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
67. PALD1 ENSGALG00000004465 3553 0.876 - - - - - - 0.876 - - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
68. VPS29 ENSGALG00000004529 22509 0.875 - - - - - - 0.875 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
69. MPST ENSGALG00000040840 2122 0.874 - - - - - - 0.874 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
70. URM1 ENSGALG00000004971 17880 0.873 - - - - - - 0.873 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
71. UBE3B ENSGALG00000013851 1672 0.873 - - - - - - 0.873 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
72. CEP290 ENSGALG00000011177 1559 0.873 - - - - - - 0.873 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
73. ENSGALG00000013233 ENSGALG00000013233 3265 0.872 - - - - - - 0.872 - - -
74. DPYSL3 ENSGALG00000007582 7743 0.872 - - - - - - 0.872 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
75. WDSUB1 ENSGALG00000012574 2038 0.872 - - - - - - 0.872 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
76. MBNL2 ENSGALG00000016890 3162 0.87 - - - - - - 0.870 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
77. LPAR1 ENSGALG00000015729 3874 0.87 - - - - - - 0.870 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
78. RAB1A ENSGALG00000031582 6929 0.869 - - - - - - 0.869 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
79. ATM ENSGALG00000017159 893 0.869 - - - - - - 0.869 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
80. DNAJC16 ENSGALG00000032832 750 0.868 - - - - - - 0.868 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
81. ITSN1 ENSGALG00000036677 5727 0.868 - - - - - - 0.868 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
82. RNF20 ENSGALG00000015548 7199 0.868 - - - - - - 0.868 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
83. RBL1 ENSGALG00000001332 2568 0.867 - - - - - - 0.867 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
84. BIVM ENSGALG00000016861 3987 0.866 - - - - - - 0.866 - - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
85. B4GALT3 ENSGALG00000022891 2825 0.865 - - - - - - 0.865 - - - beta-1,4-galactosyltransferase 3
86. NAT9 ENSGALG00000007723 2098 0.865 - - - - - - 0.865 - - - N-acetyltransferase 9 (putative), transcript variant X7
87. NSRP1 ENSGALG00000004186 1683 0.865 - - - - - - 0.865 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
88. SHROOM2 ENSGALG00000030802 4517 0.865 - - - - - - 0.865 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
89. CCDC101 CCDC101 9111 0.864 - - - - - - 0.864 - - -
90. ENTPD8L ENSGALG00000008936 731 0.864 - - - - - - 0.864 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
91. LIMCH1 ENSGALG00000014258 1987 0.863 - - - - - - 0.863 - - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
92. IFT74 ENSGALG00000001801 1932 0.863 - - - - - - 0.863 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
93. OCRL ENSGALG00000003920 1812 0.862 - - - - - - 0.862 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
94. HESX1 ENSGALG00000005506 203 0.862 - - - - - - 0.862 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
95. SQLE ENSGALG00000036915 4172 0.862 - - - - - - 0.862 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
96. PIK3R3 ENSGALG00000010335 374 0.86 - - - - - - 0.860 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
97. HAUS1 ENSGALG00000040397 6195 0.86 - - - - - - 0.860 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
98. GPN3 ENSGALG00000003807 6320 0.86 - - - - - - 0.860 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
99. DCLK2 ENSGALG00000032386 2253 0.858 - - - - - - 0.858 - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
100. UPK3BL ENSGALG00000001885 1650 0.857 - - - - - - 0.857 - - - uroplakin 3B-like

There are 320 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA