Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PAPD5

Gene Name Gene ID Reads Annotation
PAPD5 2186 poly(A) RNA polymerase D5, non-canonical











Genes with expression patterns similar to PAPD5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PAPD5 2186 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(A) RNA polymerase D5, non-canonical
2. SETD1B ENSGALG00000004324 2897 1.521 - - 0.784 - - - - 0.737 - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
3. GLG1 ENSGALG00000039818 6221 1.476 - - 0.747 - - - 0.729 - - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
4. COQ3 ENSGALG00000015486 3508 1.468 - - 0.767 - - - - - 0.701 - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
5. DNM1L ENSGALG00000012929 6174 1.467 - - 0.760 - - - - 0.707 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
6. TMEM132C ENSGALG00000002714 2644 0.899 - - 0.899 - - - - - - - transmembrane protein 132C, transcript variant X1
7. PTCD3 ENSGALG00000015773 3059 0.888 - - 0.888 - - - - - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
8. TFAP2C ENSGALG00000007690 768 0.875 - - 0.875 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
9. WSB2 ENSGALG00000008151 13246 0.874 - - 0.874 - - - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
10. ARID3A ENSGALG00000026231 867 0.871 - - 0.871 - - - - - - - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
11. ZNRF1 ENSGALG00000029017 1429 0.866 - - 0.866 - - - - - - - zinc and ring finger 1 [Source:HGNC Symbol;Acc:HGNC:18452]
12. ZC3H11A ENSGALG00000000541 2712 0.864 - - 0.864 - - - - - - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
13. BAG5 ENSGALG00000031062 4498 0.864 - - 0.864 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
14. NEMF ENSGALG00000012263 2250 0.864 - - 0.864 - - - - - - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
15. MTHFSD ENSGALG00000033322 824 0.858 - - 0.858 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
16. MRPS33 ENSGALG00000028879 17966 0.858 - - 0.858 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
17. TUBGCP3 ENSGALG00000016836 332 0.857 - - 0.857 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
18. MAPRE3 ENSGALG00000031726 191 0.857 - - 0.857 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
19. SLK ENSGALG00000008318 2220 0.857 - - 0.857 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
20. ING3 ENSGALG00000009023 4961 0.854 - - 0.854 - - - - - - - inhibitor of growth family member 3 [Source:NCBI gene;Acc:417762]
21. CUL5 ENSGALG00000017165 2480 0.854 - - 0.854 - - - - - - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
22. SBNO1 ENSGALG00000003392 6731 0.853 - - 0.853 - - - - - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
23. RALGAPA2 240 0.848 - - 0.848 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
24. SEPHS1 ENSGALG00000014575 10701 0.847 - - 0.847 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
25. ENSGALG00000009863 ENSGALG00000009863 7375 0.847 - - 0.847 - - - - - - -
26. NACAD 679 0.845 - - 0.845 - - - - - - - NAC alpha domain containing, transcript variant X1
27. POGZ ENSGALG00000036365 4056 0.845 - - 0.845 - - - - - - - pogo transposable element with ZNF domain, transcript variant X2
28. STRBP ENSGALG00000029927 3516 0.842 - - 0.842 - - - - - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
29. ATF7IP ENSGALG00000011814 1571 0.841 - - 0.841 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
30. WAPAL WAPAL 625 0.84 - - 0.840 - - - - - - -
31. NGF ENSGALG00000002556 122 0.838 - - 0.838 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
32. APTX ENSGALG00000001954 692 0.838 - - 0.838 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
33. CDC5L ENSGALG00000016704 22893 0.836 - - 0.836 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
34. ARID2 ENSGALG00000033074 3461 0.835 - - 0.835 - - - - - - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
35. ABHD13 ENSGALG00000016853 4975 0.835 - - 0.835 - - - - - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
36. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.834 - - 0.834 - - - - - - -
37. CDC45 ENSGALG00000001616 8432 0.833 - - 0.833 - - - - - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
38. ERCC3 ENSGALG00000011515 3133 0.833 - - 0.833 - - - - - - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
39. STXBP6 ENSGALG00000009847 224 0.832 - - 0.832 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
40. SLC37A3 ENSGALG00000012849 836 0.832 - - 0.832 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
41. ISY1 ENSGALG00000005012 7477 0.831 - - 0.831 - - - - - - - ISY1 splicing factor homolog
42. SNN ENSGALG00000028876 1687 0.831 - - 0.831 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
43. DAK DAK 13208 0.831 - - 0.831 - - - - - - -
44. VPS13D ENSGALG00000034777 2350 0.831 - - 0.831 - - - - - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
45. TAF1B ENSGALG00000016437 2318 0.83 - - 0.830 - - - - - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
46. SURF6 ENSGALG00000038413 11178 0.83 - - 0.830 - - - - - - - surfeit 6 [Source:NCBI gene;Acc:417160]
47. QDPR ENSGALG00000030070 6953 0.829 - - 0.829 - - - - - - - quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
48. AKT3 ENSGALG00000034081 866 0.829 - - 0.829 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
49. UBE2B ENSGALG00000032664 6069 0.829 - - 0.829 - - - - - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
50. TUBA4A ENSGALG00000000433 1367 0.829 - - 0.829 - - - - - - - tubulin alpha 4a
51. IFT81 ENSGALG00000003854 2534 0.829 - - 0.829 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
52. RECQL ENSGALG00000013174 1323 0.828 - - 0.828 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
53. DCP1B 1306 0.828 - - 0.828 - - - - - - - decapping mRNA 1B
54. ABCE1 ENSGALG00000009961 958 0.827 - - 0.827 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
55. OSGIN2 ENSGALG00000042840 83 0.827 - - 0.827 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
56. DNAJC24 ENSGALG00000012130 1882 0.827 - - 0.827 - - - - - - - DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
57. DUSP19 ENSGALG00000043268 5543 0.826 - - 0.826 - - - - - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
58. DDX6 ENSGALG00000033064 2193 0.826 - - 0.826 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
59. HOXB5 ENSGALG00000034907 3646 0.826 - - 0.826 - - - - - - - homeobox B5 [Source:NCBI gene;Acc:425096]
60. BBX ENSGALG00000015353 1281 0.825 - - 0.825 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
61. CSTF3 ENSGALG00000011685 4711 0.825 - - 0.825 - - - - - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
62. SLC3A1 ENSGALG00000009973 608 0.825 - - 0.825 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
63. TMEM242 ENSGALG00000013689 377 0.825 - - 0.825 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
64. TTPAL ENSGALG00000004244 2734 0.824 - - 0.824 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
65. ENSGALG00000028964 ENSGALG00000028964 46 0.824 - - 0.824 - - - - - - -
66. FBXL5 ENSGALG00000014510 245 0.824 - - 0.824 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
67. SELM SELM 6366 0.824 - - 0.824 - - - - - - -
68. MRC2 ENSGALG00000000461 48 0.823 - - 0.823 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
69. U4 U4 69 0.823 - - 0.823 - - - - - - -
70. RFK ENSGALG00000033558 1364 0.823 - - 0.823 - - - - - - - riboflavin kinase, transcript variant X3
71. TDRD6 48 0.823 - - 0.823 - - - - - - - tudor domain containing 6
72. MED12 ENSGALG00000036322 814 0.823 - - 0.823 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
73. ITGB4 ENSGALG00000002389 44 0.823 - - 0.823 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
74. CLEC16A ENSGALG00000007167 66 0.822 - - 0.822 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
75. BEND5 ENSGALG00000010505 3298 0.822 - - 0.822 - - - - - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
76. L3MBTL3 ENSGALG00000034030 113 0.822 - - 0.822 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
77. CDC14B ENSGALG00000012627 110 0.822 - - 0.822 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
78. ENSGALG00000002020 ENSGALG00000002020 183 0.822 - - 0.822 - - - - - - -
79. STAMBP ENSGALG00000042555 1362 0.822 - - 0.822 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
80. AKAP10 ENSGALG00000004679 103 0.821 - - 0.821 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
81. CNTRL ENSGALG00000001513 1773 0.821 - - 0.821 - - - - - - - centriolin [Source:NCBI gene;Acc:417121]
82. ENSGALG00000020103 ENSGALG00000020103 64 0.821 - - 0.821 - - - - - - -
83. UEVLD ENSGALG00000006342 164 0.821 - - 0.821 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
84. RQCD1 RQCD1 110 0.821 - - 0.821 - - - - - - -
85. SZT2 ENSGALG00000028561 255 0.821 - - 0.821 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
86. GTF2H2 ENSGALG00000002399 2361 0.821 - - 0.821 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
87. ABCC3 ENSGALG00000007522 340 0.821 - - 0.821 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
88. DBN1 ENSGALG00000033405 216 0.82 - - 0.820 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
89. PRPF40A ENSGALG00000012526 7724 0.82 - - 0.820 - - - - - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
90. RALGDS ENSGALG00000003412 4478 0.82 - - 0.820 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
91. PCYT1B 190 0.819 - - 0.819 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
92. TRAF3IP1 ENSGALG00000004236 7094 0.819 - - 0.819 - - - - - - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
93. PTDSS2 ENSGALG00000004300 682 0.819 - - 0.819 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
94. NXPE3 ENSGALG00000015344 111 0.819 - - 0.819 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
95. TRIM13 ENSGALG00000017011 92 0.819 - - 0.819 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
96. GLB1L2 ENSGALG00000001604 4057 0.819 - - 0.819 - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
97. ENSGALG00000004703 ENSGALG00000004703 112 0.819 - - 0.819 - - - - - - -
98. TWSG1 ENSGALG00000008400 1869 0.819 - - 0.819 - - - - - - - twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
99. ZNF385D ENSGALG00000011283 2578 0.818 - - 0.818 - - - - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
100. F2R ENSGALG00000014983 106 0.817 - - 0.817 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA