Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PAMR1

Gene Name Gene ID Reads Annotation
PAMR1 ENSDARG00000093480 40 peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]










Genes with expression patterns similar to PAMR1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PAMR1 ENSDARG00000093480 40 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
2. CCDC83 ENSDARG00000077179 29 2.304 0.734 - - - 0.812 - - 0.758 - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
3. hepacam 73 2 1.000 - - - - - 1.000 - - hepatic and glial cell adhesion molecule, transcript variant X2
4. iffo1a ENSDARG00000062976 5 1.978 1.000 - - - - 0.978 - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
5. C11H1orf116 C11H1orf116 9 1.958 - 0.980 - - - 0.978 - - -
6. SLC44A1 SLC44A1 43 1.944 - - - - - 0.944 1.000 - -
7. si:ch73-223d24.4 si:ch73-223d24.4 5 1.934 1.000 - - - - - - 0.934 -
8. si:dkey-4c15.12 ENSDARG00000095350 119 1.917 - - - - - 0.917 1.000 - - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
9. dapk3 ENSDARG00000074447 12 1.917 - - 0.925 - - - - 0.992 - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
10. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1.914 1.000 0.914 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
11. dnaaf2 ENSDARG00000103132 24 1.914 1.000 0.914 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
12. tas1r3 ENSDARG00000006341 3 1.914 - 0.914 - - - - 1.000 - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
13. trim35-38 trim35-38 3 1.895 - 0.914 0.981 - - - - - -
14. fkbp1ab ENSDARG00000033567, ENSDARG00000110465, ENSDARG00000116437 83 1.892 - - 0.892 - - - 1.000 - - FK506 binding protein 1Ab [Source:ZFIN;Acc:ZDB-GENE-040927-9]
15. sostdc1a ENSDARG00000068892 127 1.844 1.000 - - - - - 0.844 - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
16. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.842 1.000 0.842 - - - - - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
17. CABZ01113374.2 CABZ01113374.2 27 1.838 - - - - - - 1.000 0.838 -
18. GRID1 GRID1 51 1.833 1.000 0.833 - - - - - - -
19. ltk ENSDARG00000042861, ENSDARG00000116109 76 1.811 - - 0.855 - - 0.956 - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
20. PDE4B PDE4B 13 1.811 - - - - 0.811 - 1.000 - -
21. zte25 zte25 29 1.81 - 1.000 - - - - - 0.810 -
22. si:dkey-4c15.13 ENSDARG00000095704 13 1.796 - 0.823 0.973 - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
23. CU856539.2 ENSDARG00000058946 6 1.79 - 0.842 - - - 0.948 - - - myosin-IIIb [Source:NCBI gene;Acc:556989]
24. cacna1aa ENSDARG00000037905 4 1.788 - 0.914 - - - - - 0.874 - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
25. FANCA ENSDARG00000098241 39 1.779 - 0.914 - - - - - 0.865 - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
26. BX323050.1 BX323050.1 116 1.768 0.917 - - - - 0.851 - - -
27. PLEKHG3 72 1.766 - - - - - 0.978 - 0.788 - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
28. zgc:158852 ENSDARG00000102076 65 1.764 0.917 - - - - 0.847 - - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
29. ak7b ENSDARG00000017023 25 1.759 1.000 - - - - - - 0.759 - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
30. il2rb ENSDARG00000075720 116 1.752 0.883 - - - - 0.869 - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
31. tuba4l ENSDARG00000074289 101 1.745 0.946 - - - - 0.799 - - - tubulin, alpha 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-5588]
32. CU928126.3 CU928126.3 18 1.744 - - 0.825 - - 0.919 - - -
33. iqcc ENSDARG00000092483 65 1.74 0.917 0.823 - - - - - - - IQ motif containing C [Source:ZFIN;Acc:ZDB-GENE-090313-325]
34. npy8br ENSDARG00000005780 15 1.738 - 0.914 0.824 - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
35. slc5a5 ENSDARG00000005392 6 1.73 - - - 0.730 - - 1.000 - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
36. CABZ01083442.1 ENSDARG00000105714 36 1.729 - - 0.967 - - 0.762 - - - si:cabz01083442.1 [Source:NCBI gene;Acc:101883419]
37. fbln5 ENSDARG00000039273 105 1.716 - - - - 0.778 0.938 - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
38. lrrc34 ENSDARG00000062235 23 1.712 - 0.914 - - - - - 0.798 - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
39. trpc2 trpc2 10 1.708 - - - 0.730 - 0.978 - - -
40. chmp6b ENSDARG00000102024 37 1.706 0.937 - - - 0.769 - - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
41. CABZ01092943.1 CABZ01092943.1 29 1.692 0.978 - 0.714 - - - - - -
42. antxr1a ENSDARG00000025672 32 1.678 - - - - 0.761 0.917 - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
43. P2RY1 ENSDARG00000105281 45 1.678 - 0.833 - - - 0.845 - - - purinergic receptor P2Y1 [Source:ZFIN;Acc:ZDB-GENE-121004-2]
44. si:ch73-334d15.1 ENSDARG00000061672 49 1.675 - - 0.907 - - 0.768 - - - si:ch73-334d15.1 [Source:ZFIN;Acc:ZDB-GENE-091118-35]
45. UNC13C 119 1.673 - - - - 0.719 0.954 - - - unc-13 homolog C (C. elegans)
46. asic4b ENSDARG00000004243 31 1.668 - 0.868 - - - 0.800 - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
47. s100b ENSDARG00000057598 41 1.668 0.826 0.842 - - - - - - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
48. fopnl ENSDARG00000071198 1002 1.661 - - - - 0.776 0.885 - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
49. fgf21 ENSDARG00000100846 19 1.654 - 0.914 - - - - - 0.740 - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
50. d2hgdh ENSDARG00000060210 362 1.646 0.883 0.763 - - - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
51. fzd9a ENSDARG00000035185 58 1.643 - 0.891 - - - - - 0.752 - frizzled class receptor 9a [Source:ZFIN;Acc:ZDB-GENE-060531-77]
52. RAP1GAP2_1 RAP1GAP2_1 80 1.627 - - - - - 0.862 0.765 - -
53. ZNF784_3 ZNF784_3 44 1.62 - 0.717 - - - 0.903 - - -
54. ZDHHC12 ZDHHC12 29 1.618 - 0.914 - 0.704 - - - - -
55. hunk ENSDARG00000091317 241 1.616 - 0.765 - - - 0.851 - - - hormonally up-regulated Neu-associated kinase [Source:ZFIN;Acc:ZDB-GENE-050309-240]
56. tnfsf13b ENSDARG00000012945 54 1.615 - - 0.766 - - 0.849 - - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
57. UTS2R 109 1.606 0.798 - - - - 0.808 - - - urotensin 2 receptor
58. eral1 ENSDARG00000059887 149 1.595 - - - - - 0.893 0.702 - - Era-like 12S mitochondrial rRNA chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-060526-84]
59. ARSJ ENSDARG00000077590 684 1.592 - - - - 0.721 - - 0.871 - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
60. twist1b ENSDARG00000076010 88 1.509 0.805 - - - - 0.704 - - - twist family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-050417-357]
61. si:dkey-267k7.4 si:dkey-267k7.4 111 1.503 - - - - - 0.802 - 0.701 -
62. col4a3 ENSDARG00000003395 499 1.503 - - - - - - 0.738 0.765 - collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]
63. TRIM14_1 TRIM14_1 228 1.49 - 0.702 - - - 0.788 - - -
64. AL954372.1_1 ENSDARG00000112499 57 1.487 - - 0.727 - 0.760 - - - -
65. gucy2f ENSDARG00000025504 6 1.486 - - - 0.730 - - - 0.756 - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
66. NF1 NF1 62 1.485 - 0.763 - - 0.722 - - - -
67. sema3d ENSDARG00000017369 212 1.479 - - - - 0.759 - 0.720 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
68. CABZ01114089.1 CABZ01114089.1 127 1.462 - - - - - 0.718 0.744 - -
69. hax1 ENSDARG00000036764 617 1.425 0.715 - - - - 0.710 - - - HCLS1 associated protein X-1 [Source:ZFIN;Acc:ZDB-GENE-040718-26]
70. si:ch211-114l13.3 ENSDARG00000094346 2 1 1.000 - - - - - - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
71. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 1.000 - - - - - - - -
72. si:dkey-264b2.3 19 1 - - - - - - 1.000 - - si:dkey-264b2.3, transcript variant X2
73. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
74. hmha1 hmha1 58 1 1.000 - - - - - - - -
75. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - - - 1.000 - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
76. si:ch211-196c10.11 si:ch211-196c10.11 2 1 1.000 - - - - - - - -
77. C17orf105 C17orf105 1 1 - - - - - - 1.000 - -
78. MFAP4 ENSDARG00000090783 8 1 - - - - - - 1.000 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
79. CABZ01079015.1 CABZ01079015.1 10 1 1.000 - - - - - - - -
80. hsd11b2 ENSDARG00000001975 245 1 1.000 - - - - - - - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
81. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
82. syngr2b_1 ENSDARG00000104470 24 1 - - - - - - 1.000 - - synaptogyrin 2b [Source:ZFIN;Acc:ZDB-GENE-070424-19]
83. zglp1 ENSDARG00000067669 6 1 - - - - - - 1.000 - - zinc finger, GATA-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-359]
84. hif1aa ENSDARG00000006181 109 1 - 1.000 - - - - - - - hypoxia inducible factor 1 subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-080917-55]
85. si:dkey-241l7.10 si:dkey-241l7.10 38 1 - - - - - - 1.000 - -
86. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
87. si:dkey-179a6.2 si:dkey-179a6.2 1 1 1.000 - - - - - - - -
88. CU463790.1 CU463790.1 60 1 1.000 - - - - - - - -
89. PEG3_20 PEG3_20 6 1 - - - - - - 1.000 - -
90. si:dkey-206f10.5 si:dkey-206f10.5 1 1 1.000 - - - - - - - -
91. figf 48 1 - - - - - - 1.000 - - c-fos induced growth factor, transcript variant X2
92. SGCZ ENSDARG00000106258 2 1 - - - - - - 1.000 - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
93. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 1 - 1.000 - - - - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
94. elovl2 ENSDARG00000045414 119 1 - - - - - - 1.000 - - ELOVL fatty acid elongase 2 [Source:ZFIN;Acc:ZDB-GENE-060421-5612]
95. BX005106.1 BX005106.1 22 1 1.000 - - - - - - - -
96. tbx6 ENSDARG00000011785 132 1 - - - - - - 1.000 - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
97. nts ENSDARG00000057887 5 1 - - - - - - 1.000 - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
98. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 1.000 - - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
99. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 - - - - - - 1.000 - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
100. CT573256.1 ENSDARG00000091657 18 1 - - - - - - 1.000 - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]

There are 1364 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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