Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PAMR1

Gene Name Gene ID Reads Annotation
PAMR1 ENSGALG00000007886 928 peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]











Genes with expression patterns similar to PAMR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PAMR1 ENSGALG00000007886 928 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
2. PINK1 ENSGALG00000037593 3794 1.664 - - - - - - 0.758 0.906 - - PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:HGNC:14581]
3. GSTA3 ENSGALG00000016325 1254 1.609 - - - - - - - 0.843 0.766 - glutathione S-transferase alpha 3 [Source:NCBI gene;Acc:414896]
4. IFT88 1241 1.586 - - - - - - 0.830 - 0.756 - intraflagellar transport 88, transcript variant X3
5. WBSCR27 3511 1.583 - - - - - - - 0.877 0.706 - Williams Beuren syndrome chromosome region 27
6. MRC1 ENSGALG00000008629 259 0.981 - - - - - - - 0.981 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
7. ISCA2 ENSGALG00000020417 1130 0.98 - - - - - - - 0.980 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
8. PYGL ENSGALG00000012365 4691 0.977 - - - - - - - 0.977 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
9. TES ENSGALG00000031934 5908 0.976 - - - - - - - 0.976 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
10. ENSGALG00000001854 ENSGALG00000001854 965 0.976 - - - - - - - 0.976 - -
11. ORAI1 ENSGALG00000004240 515 0.975 - - - - - - - 0.975 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
12. ZBTB26 ENSGALG00000042762 1920 0.975 - - - - - - - 0.975 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
13. KIAA0930 ENSGALG00000014226 1243 0.974 - - - - - - - 0.974 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
14. B3GNT7 ENSGALG00000007701 929 0.972 - - - - - - - 0.972 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
15. EX-FABP EX-FABP 516 0.972 - - - - - - - 0.972 - -
16. TRIM62 ENSGALG00000028437 5124 0.972 - - - - - - - 0.972 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
17. LAMP2 ENSGALG00000008572 198 0.971 - - - - - - - 0.971 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
18. SEMA3E ENSGALG00000038225 677 0.971 - - - - - - - 0.971 - - semaphorin 3E [Source:NCBI gene;Acc:374089]
19. CWH43 ENSGALG00000041921 68 0.97 - - - - - - - 0.970 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
20. II II 929 0.97 - - - - - - - 0.970 - -
21. GAA ENSGALG00000038853 158 0.97 - - - - - - - 0.970 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
22. VPS37A ENSGALG00000013646 55 0.97 - - - - - - - 0.970 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
23. FUBP1 ENSGALG00000008939 2850 0.969 - - - - - - - 0.969 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
24. TMEM200A ENSGALG00000002282 77 0.969 - - - - - - - 0.969 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
25. SLC30A2 ENSGALG00000010375 44 0.969 - - - - - - - 0.969 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
26. MDM4 ENSGALG00000000636 91 0.968 - - - - - - - 0.968 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
27. TFG ENSGALG00000015299 849 0.967 - - - - - - - 0.967 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
28. CENPC1 CENPC1 3324 0.967 - - - - - - - 0.967 - -
29. YARS2 503 0.966 - - - - - - - 0.966 - - tyrosyl-tRNA synthetase 2
30. LRAT ENSGALG00000009276 220 0.966 - - - - - - - 0.966 - - lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685]
31. NIT1 ENSGALG00000007585 1256 0.965 - - - - - - - 0.965 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
32. LIPG ENSGALG00000043734 2490 0.965 - - - - - - - 0.965 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
33. C4BPA ENSGALG00000001175 4278 0.965 - - - - - - - 0.965 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
34. LRRC45 ENSGALG00000002877 1751 0.964 - - - - - - - 0.964 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
35. DSG2 ENSGALG00000015142 67 0.964 - - - - - - - 0.964 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
36. LOC422106 ENSGALG00000019757 453 0.963 - - - - - - - 0.963 - - uncharacterized LOC422106
37. ENSGALG00000016572 ENSGALG00000016572 79 0.962 - - - - - - - 0.962 - -
38. HDAC4 ENSGALG00000004288 2124 0.962 - - - - - - - 0.962 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
39. TRMT61B ENSGALG00000008979 615 0.961 - - - - - - - 0.961 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
40. PHLPP2 ENSGALG00000000875 561 0.96 - - - - - - - 0.960 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
41. ARAP2 ENSGALG00000041373 233 0.958 - - - - - - - 0.958 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
42. DNAJC11 ENSGALG00000000627 769 0.958 - - - - - - - 0.958 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
43. CECR5L ENSGALG00000005020 116 0.958 - - - - - - - 0.958 - - cat eye syndrome chromosome region, candidate 5-like
44. CHUK ENSGALG00000003289 5698 0.958 - - - - - - - 0.958 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
45. LDHA ENSGALG00000006300 4796 0.955 - - - - - - - 0.955 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
46. HSPA13 ENSGALG00000019201 712 0.954 - - - - - - - 0.954 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
47. CASP7 ENSGALG00000008933 506 0.953 - - - - - - - 0.953 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
48. GJB6 ENSGALG00000017136 500 0.953 - - - - - - - 0.953 - - gap junction protein beta 6 [Source:NCBI gene;Acc:395771]
49. ANXA6 ENSGALG00000004357 2891 0.952 - - - - - - - 0.952 - - annexin A6 [Source:NCBI gene;Acc:395481]
50. SOX5 ENSGALG00000032768 998 0.952 - - - - - - - 0.952 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
51. EDA ENSGALG00000035966 602 0.951 - - - - - - - 0.951 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
52. PRPSAP1 ENSGALG00000021539 3517 0.951 - - - - - - - 0.951 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
53. RASGEF1A ENSGALG00000002525 918 0.951 - - - - - - - 0.951 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
54. ANKRD40L ENSGALG00000026189 887 0.949 - - - - - - - 0.949 - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
55. CCDC51 ENSGALG00000006465 1845 0.948 - - - - - - - 0.948 - - coiled-coil domain containing 51, transcript variant X1
56. SLC25A48 ENSGALG00000006341 2606 0.947 - - - - - - - 0.947 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
57. RIN3 ENSGALG00000010806 729 0.946 - - - - - - - 0.946 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
58. GADD45 GADD45 8780 0.946 - - - - - - - 0.946 - -
59. STK17B ENSGALG00000007924 519 0.946 - - - - - - - 0.946 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
60. SENP5 ENSGALG00000008545 909 0.946 - - - - - - - 0.946 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
61. NRG4 ENSGALG00000002952 1440 0.946 - - - - - - - 0.946 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
62. TOX ENSGALG00000039102 1434 0.944 - - - - - - - 0.944 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
63. TRAM2 ENSGALG00000016673 438 0.943 - - - - - - - 0.943 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
64. HSDL1 ENSGALG00000003273 1108 0.943 - - - - - - - 0.943 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
65. AMER1 ENSGALG00000007599 994 0.942 - - - - - - - 0.942 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
66. MSRB1 ENSGALG00000005414 4197 0.942 - - - - - - - 0.942 - - methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]
67. LPIN1 ENSGALG00000016456 1044 0.942 - - - - - - - 0.942 - - lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]
68. MAPKKK3L ENSGALG00000005884 1011 0.941 - - - - - - - 0.941 - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
69. ECI2 ENSGALG00000012809 3692 0.938 - - - - - - - 0.938 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
70. COL6A2 ENSGALG00000039216 892 0.938 - - - - - - - 0.938 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
71. SLC41A1 ENSGALG00000000721 1604 0.933 - - - - - - - 0.933 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
72. H4-I H4-I 2327 0.933 - - - - - - - 0.933 - -
73. CLUH ENSGALG00000005854 2100 0.932 - - - - - - - 0.932 - - clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
74. CHKA ENSGALG00000036754 5077 0.932 - - - - - - - 0.932 - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
75. UBA7 ENSGALG00000036263 2918 0.931 - - - - - - - 0.931 - - ubiquitin-like modifier activating enzyme 7
76. SALL1 ENSGALG00000039238 3740 0.929 - - - - - - - 0.929 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
77. ENSGALG00000006569 ENSGALG00000006569 2169 0.927 - - - - - - - 0.927 - -
78. CGT CGT 948 0.927 - - - - - - - 0.927 - -
79. DBR1 ENSGALG00000043797 1896 0.926 - - - - - - - 0.926 - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
80. ABCB10 ENSGALG00000011096 1407 0.925 - - - - - - - 0.925 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
81. TCEANC ENSGALG00000016581 948 0.924 - - - - - - - 0.924 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
82. HMP19 ENSGALG00000028602 1604 0.924 - - - - - - - 0.924 - - Gallus gallus HMP19 protein (HMP19), mRNA. [Source:RefSeq mRNA;Acc:NM_001326465]
83. GPX7 ENSGALG00000010633 7224 0.922 - - - - - - - 0.922 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
84. TM2D3 ENSGALG00000026271 2566 0.921 - - - - - - - 0.921 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
85. BMP3 ENSGALG00000035052 3260 0.919 - - - - - - - 0.919 - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
86. SEC11C ENSGALG00000031663 4266 0.919 - - - - - - - 0.919 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
87. PSMD1 ENSGALG00000007664 7609 0.917 - - - - - - - 0.917 - - proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]
88. PLD1 ENSGALG00000009252 2331 0.916 - - - - - - - 0.916 - - phospholipase D1, transcript variant X5
89. TRIM71 ENSGALG00000019622 1633 0.914 - - - - - - - 0.914 - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
90. DYNLRB2 ENSGALG00000005402 630 0.914 - - - - - - - 0.914 - - dynein light chain roadblock-type 2 [Source:NCBI gene;Acc:415802]
91. TUSC3 ENSGALG00000013674 2848 0.914 - - - - - - - 0.914 - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
92. ENSGALG00000004032 ENSGALG00000004032 2010 0.912 - - - - - - - 0.912 - -
93. FA2H ENSGALG00000002775 396 0.912 - - - - - - - 0.912 - - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
94. SATB1 ENSGALG00000011254 1377 0.909 - - - - - - - 0.909 - - SATB homeobox 1 [Source:NCBI gene;Acc:420647]
95. CHALK5 CHALK5 1351 0.907 - - - - - - - 0.907 - -
96. MTMR2 ENSGALG00000017200 1446 0.906 - - - - - - - 0.906 - - myotubularin related protein 2 [Source:NCBI gene;Acc:418992]
97. GALK2 ENSGALG00000036201 1016 0.905 - - - - - - - 0.905 - - galactokinase 2 [Source:NCBI gene;Acc:415596]
98. TBX3 ENSGALG00000036043 2888 0.902 - - - - - - - 0.902 - - T-box 3 [Source:NCBI gene;Acc:374202]
99. GSTA GSTA 3130 0.898 - - - - - - - 0.898 - -
100. NAT ENSGALG00000005472 662 0.896 - - - - - - - 0.896 - - N-acetyltransferase, liver isozyme [Source:NCBI gene;Acc:396537]

There are 230 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA