Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PAM16

Gene Name Gene ID Reads Annotation
PAM16 9684 presequence translocase associated motor 16 homolog, transcript variant X2











Genes with expression patterns similar to PAM16

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PAM16 9684 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 presequence translocase associated motor 16 homolog, transcript variant X2
2. VPS26A ENSGALG00000004174 9198 1.8 - - - - - - 0.816 0.984 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
3. RABL5 RABL5 5264 1.775 - - - - - - 0.795 0.980 - -
4. C1orf21 ENSGALG00000020922 4035 1.77 - - - 0.789 - - - 0.981 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
5. CXorf23 1582 1.761 - - - 0.778 - - - 0.983 - - chromosome X open reading frame 23, transcript variant X3
6. MBNL2 ENSGALG00000016890 3162 1.747 - - - - - - 0.794 0.953 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
7. CDC73 ENSGALG00000002469 4586 1.724 - - - - - - 0.762 0.962 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
8. ZNF451 ENSGALG00000016282 3380 1.644 - - - - - - 0.767 0.877 - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
9. TAF8 ENSGALG00000003498 2071 1.63 - - - 0.838 - - 0.792 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
10. CANX ENSGALG00000032148 11297 1.59 - - - 0.765 - - 0.825 - - - calnexin [Source:NCBI gene;Acc:416288]
11. TRIM33 ENSGALG00000001976 7404 1.567 - - - 0.780 - - 0.787 - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
12. COPA ENSGALG00000009153 11618 1.521 - - - 0.721 - - 0.800 - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
13. ADARB1 ENSGALG00000007527 2480 1.501 - - - 0.714 - - 0.787 - - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
14. TLCD1 ENSGALG00000003973 17569 1.469 - - - 0.700 - - 0.769 - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
15. ENSGALG00000028164 ENSGALG00000028164 3325 1.463 - - 0.760 - - - 0.703 - - -
16. HMOX1 ENSGALG00000012550 1186 0.99 - - - - - - - 0.990 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
17. LIPA ENSGALG00000006378 4414 0.99 - - - - - - - 0.990 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
18. KPNA4 ENSGALG00000009549 3674 0.989 - - - - - - - 0.989 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
19. GNE ENSGALG00000015331 1577 0.989 - - - - - - - 0.989 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
20. FTSJ2 FTSJ2 2951 0.989 - - - - - - - 0.989 - -
21. AARSD1 ENSGALG00000002880 3068 0.988 - - - - - - - 0.988 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
22. DLGAP4 ENSGALG00000001046 6872 0.988 - - - - - - - 0.988 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
23. SETD2 ENSGALG00000042051 2981 0.988 - - - - - - - 0.988 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
24. UTP23 ENSGALG00000032400 3601 0.987 - - - - - - - 0.987 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
25. TBCE ENSGALG00000013950 3076 0.987 - - - - - - - 0.987 - - tubulin folding cofactor E
26. C2CD2 ENSGALG00000016148 2734 0.987 - - - - - - - 0.987 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
27. ENSGALG00000001591 ENSGALG00000001591 784 0.987 - - - - - - - 0.987 - -
28. TLN2 2295 0.987 - - - - - - - 0.987 - - talin 2, transcript variant X5
29. WNK2 ENSGALG00000038850 4712 0.986 - - - - - - - 0.986 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
30. NR3C2 ENSGALG00000010035 603 0.986 - - - - - - - 0.986 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
31. RASGEF1B 2014 0.986 - - - - - - - 0.986 - - RasGEF domain family member 1B, transcript variant X8
32. FPGT ENSGALG00000026958 788 0.986 - - - - - - - 0.986 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
33. YTHDF3 ENSGALG00000039774 170 0.986 - - - - - - - 0.986 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
34. NCS1 ENSGALG00000012710 1104 0.986 - - - - - - - 0.986 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
35. CAPRIN2 1473 0.986 - - - - - - - 0.986 - - caprin family member 2, transcript variant X7
36. VASH1 ENSGALG00000043036 1235 0.986 - - - - - - - 0.986 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
37. GNB1L ENSGALG00000001925 1981 0.986 - - - - - - - 0.986 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
38. FNTA ENSGALG00000015397 3741 0.986 - - - - - - - 0.986 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
39. CAPN9 158 0.985 - - - - - - - 0.985 - - calpain 9
40. LOC420160 ENSGALG00000004252 188 0.985 - - - - - - - 0.985 - - cathepsin L1-like, transcript variant X3
41. CHST2 ENSGALG00000034507 6172 0.985 - - - - - - - 0.985 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
42. C5orf63 C5orf63 3718 0.985 - - - - - - - 0.985 - -
43. HIP1R ENSGALG00000031511 1981 0.985 - - - - - - - 0.985 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
44. TOR1B TOR1B 197 0.985 - - - - - - - 0.985 - -
45. FGD5 ENSGALG00000008546 4031 0.985 - - - - - - - 0.985 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
46. SLC26A8 ENSGALG00000040498 253 0.985 - - - - - - - 0.985 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
47. PLA2G7 ENSGALG00000016713 2100 0.985 - - - - - - - 0.985 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
48. SEMA3F ENSGALG00000029621 2079 0.985 - - - - - - - 0.985 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
49. NKX-6.2 NKX-6.2 1370 0.984 - - - - - - - 0.984 - -
50. CABLES1 ENSGALG00000014998 1636 0.984 - - - - - - - 0.984 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
51. SLX4 ENSGALG00000031841 1208 0.984 - - - - - - - 0.984 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
52. ENSGALG00000005615 ENSGALG00000005615 4354 0.983 - - - - - - - 0.983 - -
53. WDR82 ENSGALG00000025904 4783 0.983 - - - - - - - 0.983 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
54. HVCN1 ENSGALG00000004562 2550 0.982 - - - - - - - 0.982 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
55. MAP4K5 ENSGALG00000012321 3036 0.982 - - - - - - - 0.982 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
56. CTSA ENSGALG00000006876 5380 0.981 - - - - - - - 0.981 - - cathepsin A [Source:NCBI gene;Acc:428163]
57. POLDIP2 ENSGALG00000003211 11664 0.981 - - - - - - - 0.981 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
58. METTL6 ENSGALG00000040665 4467 0.979 - - - - - - - 0.979 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
59. MRPL10 ENSGALG00000014387 12386 0.979 - - - - - - - 0.979 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
60. TAF12 ENSGALG00000000991 8709 0.978 - - - - - - - 0.978 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
61. EXOSC1 ENSGALG00000039917 5259 0.978 - - - - - - - 0.978 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
62. ITCH ENSGALG00000040474 2646 0.977 - - - - - - - 0.977 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
63. UBE2Q2 3861 0.975 - - - - - - - 0.975 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
64. TARS ENSGALG00000003288 12702 0.975 - - - - - - - 0.975 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
65. WDR45B ENSGALG00000001563 5870 0.975 - - - - - - - 0.975 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
66. AKR1B10L3 ENSGALG00000019284 5869 0.973 - - - - - - - 0.973 - - aldo-keto reductase family 1 member B10-like 3
67. EMC1 ENSGALG00000003969 6876 0.973 - - - - - - - 0.973 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
68. UBE2J2 ENSGALG00000001848 6527 0.971 - - - - - - - 0.971 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
69. FGD3 ENSGALG00000005237 4410 0.97 - - - - - - - 0.970 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
70. CPEB2 ENSGALG00000014516 1187 0.965 - - - - - - - 0.965 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
71. SRP9 ENSGALG00000026009 12418 0.963 - - - - - - - 0.963 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
72. MRPL28 ENSGALG00000007473 19134 0.962 - - - - - - - 0.962 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
73. PHF20L1 ENSGALG00000033205 7598 0.961 - - - - - - - 0.961 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
74. TCEA2 ENSGALG00000005976 9143 0.96 - - - - - - - 0.960 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
75. TYW3 ENSGALG00000032549 4869 0.959 - - - - - - - 0.959 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
76. C10orf11 C10orf11 3087 0.959 - - - - - - - 0.959 - -
77. ENSGALG00000020092 ENSGALG00000020092 3067 0.953 - - - - - - - 0.953 - -
78. POLR2C ENSGALG00000001168 10703 0.952 - - - - - - - 0.952 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
79. SRPK2 ENSGALG00000008154 7385 0.949 - - - - - - - 0.949 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
80. LUC7L3 ENSGALG00000007386 11944 0.949 - - - - - - - 0.949 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
81. PCDH1 ENSGALG00000002553 2938 0.943 - - - - - - - 0.943 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
82. TNRC6A ENSGALG00000006068 9166 0.943 - - - - - - - 0.943 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
83. HIPK3 ENSGALG00000011695 6842 0.93 - - - - - - - 0.930 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
84. NPEPL1 ENSGALG00000007533 5908 0.923 - - - - - - - 0.923 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
85. APPBP2 ENSGALG00000005314 6447 0.918 - - - - - - - 0.918 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
86. C13H5ORF41 C13H5ORF41 1051 0.914 - - - - - - 0.914 - - -
87. THOC2 ENSGALG00000008507 9501 0.911 - - - - - - - 0.911 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
88. RAB3IP ENSGALG00000009959 1652 0.91 - - - - - - 0.910 - - - RAB3A interacting protein, transcript variant X1
89. ASPM ENSGALG00000032398 12784 0.908 - - - - - - - 0.908 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
90. RALBP1 ENSGALG00000008405 13780 0.904 - - - - - - - 0.904 - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
91. APRT ENSGALG00000031000 7535 0.891 - - - - - - 0.891 - - - adenine phosphoribosyltransferase [Source:NCBI gene;Acc:100857155]
92. COX16 ENSGALG00000020449 5959 0.89 - - - - - - - 0.890 - - cytochrome c oxidase assembly factor COX16 [Source:NCBI gene;Acc:423257]
93. SLC25A1 ENSGALG00000041760 4744 0.889 - - - - - - 0.889 - - - solute carrier family 25 member 1, transcript variant X2
94. MOB4 ENSGALG00000008128 10322 0.887 - - - - - - - 0.887 - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
95. VPS36 ENSGALG00000017026 3658 0.885 - - - - - - 0.885 - - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
96. ATG4B ENSGALG00000006298 2288 0.882 - - - - - - 0.882 - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
97. BRD1 ENSGALG00000029379 6047 0.879 - - - - - - 0.879 - - - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
98. NID2 ENSGALG00000012394 6717 0.878 - - - - - - - 0.878 - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
99. UCH-L1 UCH-L1 12697 0.876 - - - - - - 0.876 - - -
100. ENSGALG00000015857 ENSGALG00000015857 238 0.876 - - - - - - 0.876 - - -

There are 305 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA