Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PALMD

Gene Name Gene ID Reads Annotation
PALMD ENSGALG00000005442 901 palmdelphin [Source:NCBI gene;Acc:424475]











Genes with expression patterns similar to PALMD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PALMD ENSGALG00000005442 901 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 palmdelphin [Source:NCBI gene;Acc:424475]
2. OCA2 ENSGALG00000016740 421 1.544 - - - 0.708 - - - - - 0.836 OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
3. gga-mir-7474 ENSGALG00000033766 5727 1.534 - - 0.816 - - - - - - 0.718 gga-mir-7474 [Source:miRBase;Acc:MI0024147]
4. SERPINE2 ENSGALG00000005135 16108 1.468 - - 0.763 - - - - - - 0.705 serpin family E member 2 [Source:NCBI gene;Acc:424805]
5. COL9A3 ENSGALG00000005628 2842 0.901 - - - - - - - - - 0.901 collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
6. APBB1IP ENSGALG00000007579 30 0.879 - - - - - - - - - 0.879 amyloid beta precursor protein binding family B member 1 interacting protein [Source:NCBI gene;Acc:420492]
7. PAX1 ENSGALG00000039040 3339 0.869 - - - - - - - - - 0.869 paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
8. LMCD1 ENSGALG00000008349 928 0.863 - - - - - - - - - 0.863 LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
9. TNFIP6 TNFIP6 3024 0.861 - - - - - - - - - 0.861
10. WWP2 ENSGALG00000000699 5040 0.86 - - - - - - - - - 0.860 WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
11. SMOC1 ENSGALG00000009415 2403 0.844 - - - - - - - - - 0.844 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
12. CYP1B1 ENSGALG00000025822 3143 0.841 - - - - - - - - - 0.841 cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
13. P4HA3 ENSGALG00000042030 826 0.819 - - - - - - - - - 0.819 prolyl 4-hydroxylase subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:30135]
14. PSTPIP2 ENSGALG00000040136 37 0.819 - - - - - - - - - 0.819 proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
15. AIF1L ENSGALG00000029834 13866 0.806 - - - - - - - - - 0.806 allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
16. RBM24 ENSGALG00000012712 4138 0.799 - - - - - - - - - 0.799 RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
17. DDX60 27 0.796 - - - - - - - - - 0.796 DExD/H-box helicase 60, transcript variant X2
18. MYOD1 ENSGALG00000006216 568 0.795 - - - - - - - - - 0.795 myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
19. CCDC3 ENSGALG00000030140 258 0.791 - - - - - - - - - 0.791 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
20. C3H6ORF154 C3H6ORF154 1078 0.788 - - - - - - 0.788 - - -
21. NELL1 ENSGALG00000003777 588 0.787 - - - - - - 0.787 - - - neural EGFL like 1 [Source:HGNC Symbol;Acc:HGNC:7750]
22. MICAL2 ENSGALG00000005540 25 0.786 - - - 0.786 - - - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24693]
23. PLA2G2A ENSGALG00000031894 147 0.785 - - - - - 0.785 - - - - phospholipase A2 group IIA [Source:NCBI gene;Acc:426748]
24. HYPK ENSGALG00000013916 4900 0.785 - - - - - - 0.785 - - - huntingtin interacting protein K [Source:NCBI gene;Acc:770307]
25. LECT1 LECT1 12694 0.784 - - - - - - - - - 0.784
26. ENSGALG00000028102 ENSGALG00000028102 8 0.783 - - - - - - - - - 0.783
27. PHC3 ENSGALG00000009372 157 0.783 - - - - - - - - - 0.783 polyhomeotic homolog 3, transcript variant X8
28. SCARB1 ENSGALG00000046226 428 0.782 - - - - - - - - - 0.782 scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
29. ACAN ENSGALG00000006725 184 0.781 - - - - - - - - - 0.781 aggrecan [Source:NCBI gene;Acc:395798]
30. CHRNB4 ENSGALG00000003005 59 0.781 - - - - - - - - - 0.781 cholinergic receptor nicotinic beta 4 subunit [Source:NCBI gene;Acc:395613]
31. PDE7B ENSGALG00000013941 49 0.777 - - - - - - - - - 0.777 phosphodiesterase 7B [Source:HGNC Symbol;Acc:HGNC:8792]
32. ENSGALG00000005895 ENSGALG00000005895 889 0.774 - - - - - - 0.774 - - -
33. NXPH2 ENSGALG00000029083 353 0.773 - - - - - - - - - 0.773 neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
34. FNBP4 ENSGALG00000029702 6421 0.773 - - - - - - 0.773 - - - formin binding protein 4 [Source:HGNC Symbol;Acc:HGNC:19752]
35. SLC15A5 ENSGALG00000013097 213 0.77 - - - - - - - - - 0.770 solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
36. BLM ENSGALG00000008256 6160 0.766 - - - - - 0.766 - - - - Bloom syndrome RecQ like helicase [Source:NCBI gene;Acc:415577]
37. AHI1 ENSGALG00000013951 719 0.764 - - - - - - 0.764 - - - Abelson helper integration site 1 [Source:HGNC Symbol;Acc:HGNC:21575]
38. TM2D1 ENSGALG00000020614 764 0.764 - - - - - - 0.764 - - - TM2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24142]
39. KERA ENSGALG00000011270 4204 0.763 - - - - - - - - - 0.763 keratocan [Source:NCBI gene;Acc:373995]
40. COG5 ENSGALG00000042764 4205 0.762 - - - - - - 0.762 - - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
41. TRMT2A ENSGALG00000002094 2505 0.761 - - - - - - 0.761 - - - tRNA methyltransferase 2 homolog A [Source:HGNC Symbol;Acc:HGNC:24974]
42. LRRC41 ENSGALG00000010359 709 0.759 - - - - - - 0.759 - - - leucine rich repeat containing 41 [Source:HGNC Symbol;Acc:HGNC:16917]
43. ENSGALG00000028061 ENSGALG00000028061 2 0.758 - - - - - - - - - 0.758
44. HHIPL2 ENSGALG00000045729 9 0.758 - - - - - - - - - 0.758 HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
45. ADAM8 5 0.758 - - - - - - - - - 0.758 ADAM metallopeptidase domain 8, transcript variant X4
46. LZTS3 ENSGALG00000016001 3 0.758 - - - - - - - - - 0.758 leucine zipper tumor suppressor family member 3 [Source:HGNC Symbol;Acc:HGNC:30139]
47. BHMT ENSGALG00000004518 4700 0.758 - - - - - - - - - 0.758 betaine--homocysteine S-methyltransferase
48. MYH1B ENSGALG00000039977 3 0.758 - - - - - - - - - 0.758 myosin, heavy chain 1B, skeletal muscle [Source:NCBI gene;Acc:374069]
49. KL ENSGALG00000017068 21 0.758 - - - - - - - - - 0.758 klotho [Source:HGNC Symbol;Acc:HGNC:6344]
50. IL17F ENSGALG00000016677 9 0.758 - - - - - - - - - 0.758 interleukin 17F
51. GP9 GP9 6 0.758 - - - - - - - - - 0.758
52. EPHA2 ENSGALG00000039895 12 0.757 - - - - - - - - - 0.757 EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]
53. KBTBD8 ENSGALG00000007569 20 0.756 - - - - - - - - - 0.756 kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
54. EGFR ENSGALG00000038089 1526 0.754 - - - - - - 0.754 - - - epidermal growth factor receptor [Source:NCBI gene;Acc:396494]
55. ABCB7 ENSGALG00000007788 170 0.754 - - - - - - - - - 0.754 ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
56. ZFHX4 ENSGALG00000037164 811 0.753 - - - - - - 0.753 - - - zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
57. AK8 ENSGALG00000040923 10 0.753 - - - - - - - - - 0.753 adenylate kinase 8, transcript variant X1
58. NFATC2 ENSGALG00000007963 15 0.752 - - - - - - - - - 0.752 nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
59. SOX6 ENSGALG00000006074 102 0.752 - - - 0.752 - - - - - - Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
60. CACNA1I ENSGALG00000035051 27 0.751 - - - - - - - - - 0.751 calcium voltage-gated channel subunit alpha1 I, transcript variant X3
61. CCDC127 ENSGALG00000034628 1424 0.748 - - - - - - - - - 0.748 coiled-coil domain containing 127 [Source:NCBI gene;Acc:420970]
62. ARHGAP18 ENSGALG00000031843 2117 0.747 - - - - - - 0.747 - - - Rho GTPase activating protein 18 [Source:HGNC Symbol;Acc:HGNC:21035]
63. TMPRSS9 ENSGALG00000000458 21 0.743 - - - - - - - - - 0.743 transmembrane serine protease 9 [Source:HGNC Symbol;Acc:HGNC:30079]
64. DDX46 ENSGALG00000006404 8765 0.743 - - - - - - 0.743 - - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
65. RTN4RL2 ENSGALG00000032903 809 0.742 - - - - - - 0.742 - - - reticulon 4 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:23053]
66. MEOX2 ENSGALG00000010794 1556 0.74 - - 0.740 - - - - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
67. PPM1L ENSGALG00000009537 5 0.738 - - - - - - - - - 0.738 protein phosphatase, Mg2+/Mn2+ dependent 1L [Source:HGNC Symbol;Acc:HGNC:16381]
68. ERN2 ENSGALG00000027592 186 0.737 - - - - - - - - - 0.737 endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
69. C1QTNF3 ENSGALG00000027887 8646 0.736 - - 0.736 - - - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
70. ATP11A ENSGALG00000041644 74 0.735 - - - - - - - - - 0.735 ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]
71. C9H2ORF82 ENSGALG00000040264 4201 0.734 - - - - - - - - - 0.734 chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
72. THBS1 ENSGALG00000009626 3521 0.734 - - - - - - - - - 0.734 thrombospondin 1 [Source:NCBI gene;Acc:373987]
73. FAM47E-STBD1 FAM47E-STBD1 1148 0.734 - - - - - - 0.734 - - -
74. WISP1 ENSGALG00000030115 359 0.734 - - - - - - - - - 0.734 WNT1 inducible signaling pathway protein 1 [Source:NCBI gene;Acc:420322]
75. GUCY2F ENSGALG00000000808 2 0.733 - - - 0.733 - - - - - - guanylate cyclase 2F, retinal
76. HNF1A ENSGALG00000006968 2 0.733 - - - 0.733 - - - - - - HNF1 homeobox A [Source:NCBI gene;Acc:416967]
77. FGF6 ENSGALG00000017287 2 0.733 - - - 0.733 - - - - - - fibroblast growth factor 6 [Source:HGNC Symbol;Acc:HGNC:3684]
78. KCNH1 ENSGALG00000009877 2 0.733 - - - 0.733 - - - - - - potassium voltage-gated channel subfamily H member 1, transcript variant X8
79. RAPGEF5 ENSGALG00000034024 1264 0.733 - - - - - - 0.733 - - - Rap guanine nucleotide exchange factor 5 [Source:HGNC Symbol;Acc:HGNC:16862]
80. ITGB8 ENSGALG00000010875 13 0.733 - - - 0.733 - - - - - - integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]
81. CLEC19A ENSGALG00000030546 8 0.733 - - - 0.733 - - - - - - C-type lectin domain containing 19A [Source:HGNC Symbol;Acc:HGNC:34522]
82. STOML3 ENSGALG00000017039 6 0.733 - - - 0.733 - - - - - - stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]
83. ENSGALG00000016962 ENSGALG00000016962 6 0.733 - - - 0.733 - - - - - -
84. ENSGALG00000006384 ENSGALG00000006384 3 0.733 - - - 0.733 - - - - - -
85. MAP2K1 ENSGALG00000007687 250 0.733 - - - 0.733 - - - - - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
86. ENSGALG00000021157 ENSGALG00000021157 5 0.733 - - - 0.733 - - - - - -
87. ATP7B ENSGALG00000017021 7 0.733 - - - 0.733 - - - - - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
88. BCL2L15 124 0.732 - - - - - - - - - 0.732 BCL2 like 15
89. N4BP1 ENSGALG00000003907 1888 0.731 - - - - - - 0.731 - - - NEDD4 binding protein 1 [Source:NCBI gene;Acc:415739]
90. HSF3 ENSGALG00000040662 140 0.731 - - - - - - 0.731 - - - Heat shock factor protein 3 [Source:NCBI gene;Acc:422169]
91. HYAL2 ENSGALG00000002138 237 0.73 - - - - - - - - - 0.730 hyaluronoglucosaminidase 2 [Source:HGNC Symbol;Acc:HGNC:5321]
92. ENSGALG00000019291 ENSGALG00000019291 4 0.729 - - - - - - - - - 0.729
93. KITLG ENSGALG00000011206 71 0.727 - - - - - - - - - 0.727 KIT ligand [Source:NCBI gene;Acc:396028]
94. FNDC1 ENSGALG00000011663 1040 0.726 - - - - - - - - - 0.726 fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
95. ENSGALG00000006582 ENSGALG00000006582 8 0.726 - - - - - - - - - 0.726
96. PLCH1 ENSGALG00000010312 1294 0.725 - - - - - - 0.725 - - - phospholipase C eta 1 [Source:HGNC Symbol;Acc:HGNC:29185]
97. DMXL2 ENSGALG00000039924 672 0.725 - - - - - - - - - 0.725 Dmx like 2 [Source:HGNC Symbol;Acc:HGNC:2938]
98. GSN ENSGALG00000001446 5605 0.724 - - - - - - 0.724 - - - gelsolin [Source:NCBI gene;Acc:395774]
99. DENND3 ENSGALG00000031380 11 0.724 - - - - - - - - - 0.724 DENN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29134]
100. C5NT1AL ENSGALG00000006608 277 0.723 - - - - - - 0.723 - - - cytosolic 5'-nucleotidase 1A-like, transcript variant X2

There are 45 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA