Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PALB2

Gene Name Gene ID Reads Annotation
PALB2 ENSGALG00000006078 1549 partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]











Genes with expression patterns similar to PALB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PALB2 ENSGALG00000006078 1549 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
2. TARS2 ENSGALG00000043416 179 1.612 - - - - 0.827 - 0.785 - - - threonyl-tRNA synthetase 2, mitochondrial (putative)
3. ENSGALG00000009151 ENSGALG00000009151 6 1 - - - - - - 1.000 - - -
4. DACT1 ENSGALG00000012023 1008 1 - - - - - - - 1.000 - - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
5. PINLYP ENSGALG00000026884 23 1 - - - - - - 1.000 - - - phospholipase A2 inhibitor and LY6/PLAUR domain containing
6. A4GNT ENSGALG00000006600 11 1 - - - - - - 1.000 - - - alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
7. TEKT5 ENSGALG00000007257 5 1 - - - - - - 1.000 - - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
8. CCND2 ENSGALG00000017283 38 1 - - - - - - 1.000 - - - cyclin D2 [Source:NCBI gene;Acc:374047]
9. PRKAA2 ENSGALG00000010826 2 1 - - - - - - 1.000 - - - protein kinase AMP-activated catalytic subunit alpha 2 [Source:NCBI gene;Acc:429110]
10. DNAH5 ENSGALG00000012997 28 1 - - - - - - 1.000 - - - dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
11. C11ORF61 C11ORF61 41 1 - - - - - - 1.000 - - -
12. GPR85 ENSGALG00000009439 23 1 - - - - - - 1.000 - - - G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
13. GNG4 ENSGALG00000010986 23 1 - - - - - - 1.000 - - - G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
14. LRRC1 ENSGALG00000016304 21 1 - - - - - - 1.000 - - - leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
15. FAM196A 5 1 - - - - - - 1.000 - - - family with sequence similarity 196 member A, transcript variant X6
16. FGL2 ENSGALG00000008306 15 1 - - - - - - 1.000 - - - fibrinogen like 2 [Source:NCBI gene;Acc:768821]
17. RCBTB2 ENSGALG00000017000 3 1 - - - - - - 1.000 - - - RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]
18. DSE ENSGALG00000014963 70 1 - - - - - - 1.000 - - - dermatan sulfate epimerase, transcript variant X1
19. EPYC ENSGALG00000011269 17 1 - - - - - - 1.000 - - - epiphycan [Source:NCBI gene;Acc:417890]
20. TMEM72 ENSGALG00000026808 5 1 - - - - - - 1.000 - - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
21. CD109 ENSGALG00000015910 11 1 - - - - - - 1.000 - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
22. TMEM181 ENSGALG00000013737 19 1 - - - - - - 1.000 - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
23. VCAM1 ENSGALG00000005257 102 1 - - - - - - 1.000 - - - vascular cell adhesion molecule 1, transcript variant X1
24. TP73 ENSGALG00000001006 335 1 - - - - - - - 1.000 - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
25. IQCK ENSGALG00000028197 596 0.999 - - - - - - - 0.999 - - IQ motif containing K [Source:HGNC Symbol;Acc:HGNC:28556]
26. RFWD2 1215 0.999 - - - - - - - 0.999 - - ring finger and WD repeat domain 2, transcript variant X6
27. KIF21A ENSGALG00000007098 5919 0.999 - - - - - - - 0.999 - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
28. CREG1 ENSGALG00000040426 1188 0.999 - - - - - - - 0.999 - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
29. FOCAD ENSGALG00000015071 3677 0.999 - - - - - - - 0.999 - - focadhesin [Source:NCBI gene;Acc:427233]
30. NHLRC1 ENSGALG00000012688 1476 0.999 - - - - - - - 0.999 - - NHL repeat containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21576]
31. DDX54 ENSGALG00000007490 8729 0.998 - - - - - - - 0.998 - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
32. MAN2C1 ENSGALG00000001615 2362 0.998 - - - - - - - 0.998 - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
33. COMMD8 ENSGALG00000026279 13509 0.998 - - - - - - - 0.998 - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
34. PI4K2B ENSGALG00000031538 2607 0.997 - - - - - - - 0.997 - - phosphatidylinositol 4-kinase type 2 beta [Source:NCBI gene;Acc:422807]
35. ADAT1 ENSGALG00000000908 1484 0.997 - - - - - - - 0.997 - - adenosine deaminase, tRNA specific 1 [Source:NCBI gene;Acc:415886]
36. ASAH1 ENSGALG00000026364 2783 0.996 - - - - - - - 0.996 - - N-acylsphingosine amidohydrolase (acid ceramidase) 1 [Source:NCBI gene;Acc:422727]
37. DCAF4 ENSGALG00000009345 2604 0.996 - - - - - - - 0.996 - - DDB1 and CUL4 associated factor 4
38. HGS ENSGALG00000007224 3487 0.996 - - - - - - - 0.996 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:HGNC:4897]
39. KIF18B ENSGALG00000031553 3192 0.995 - - - - - - - 0.995 - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
40. EXOC8 ENSGALG00000043280 3596 0.995 - - - - - - - 0.995 - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
41. MRPL22 ENSGALG00000003919 2760 0.995 - - - - - - - 0.995 - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
42. ERP44 ENSGALG00000013452 5352 0.994 - - - - - - - 0.994 - - endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]
43. PSMC3IP ENSGALG00000019741 5428 0.994 - - - - - - - 0.994 - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
44. PIGQ ENSGALG00000001985 1584 0.991 - - - - - - - 0.991 - - phosphatidylinositol glycan anchor biosynthesis class Q [Source:HGNC Symbol;Acc:HGNC:14135]
45. ZDHHC14 ENSGALG00000013695 2648 0.989 - - - - - - - 0.989 - - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
46. AIF1L ENSGALG00000029834 13866 0.988 - - - - - - - 0.988 - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
47. COMT ENSGALG00000002024 2483 0.987 - - - - - - - 0.987 - - catechol-O-methyltransferase [Source:HGNC Symbol;Acc:HGNC:2228]
48. NUMA1 ENSGALG00000001258 8406 0.986 - - - - - - - 0.986 - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
49. SS18 ENSGALG00000015119 4687 0.985 - - - - - - - 0.985 - - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
50. COMMD10 ENSGALG00000002308 7442 0.984 - - - - - - - 0.984 - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
51. RERE ENSGALG00000002232 8724 0.983 - - - - - - - 0.983 - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
52. C14orf1 C14orf1 14289 0.983 - - - - - - - 0.983 - -
53. NDUFA9 ENSGALG00000017282 14358 0.982 - - - - - - - 0.982 - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
54. GTF3A ENSGALG00000017098 9264 0.982 - - - - - - - 0.982 - - general transcription factor IIIA [Source:NCBI gene;Acc:418931]
55. KRR1 ENSGALG00000010227 11783 0.98 - - - - - - - 0.980 - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
56. DRG1 ENSGALG00000006921 10791 0.978 - - - - - - - 0.978 - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
57. ISY1 ENSGALG00000005012 7477 0.974 - - - - - - - 0.974 - - ISY1 splicing factor homolog
58. LOC769668 ENSGALG00000021450 31 0.967 - - - - - - 0.967 - - - estradiol 17-beta-dehydrogenase 2-like
59. LIX1 ENSGALG00000015290 7589 0.955 - - - - - - - 0.955 - - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
60. TG ENSGALG00000039509 19 0.955 - - - - - - 0.955 - - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
61. BCAR1 ENSGALG00000042895 8222 0.944 - - - - - - - 0.944 - - BCAR1, Cas family scaffold protein [Source:HGNC Symbol;Acc:HGNC:971]
62. RIOK3 ENSGALG00000015004 4249 0.935 - - - - - - - 0.935 - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
63. RABIF ENSGALG00000000436 6449 0.934 - - - - - - - 0.934 - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
64. ENSGALG00000006296 ENSGALG00000006296 625 0.928 - - - - - 0.928 - - - -
65. EI24 ENSGALG00000038097 24081 0.927 - - - - - - - 0.927 - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
66. CP ENSGALG00000030773 119 0.918 - - - - - - 0.918 - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
67. ATG3 ENSGALG00000015204 11277 0.918 - - - - - - - 0.918 - - autophagy related 3 [Source:NCBI gene;Acc:418369]
68. HEXDCL ENSGALG00000005861 172 0.917 - - - - - - 0.917 - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing-like, transcript variant X10
69. RHOV ENSGALG00000028047 75 0.916 - - - - - 0.916 - - - - ras homolog family member V [Source:HGNC Symbol;Acc:HGNC:18313]
70. PRELP ENSGALG00000034456 4354 0.915 - - - - - - - 0.915 - - proline and arginine rich end leucine rich repeat protein [Source:HGNC Symbol;Acc:HGNC:9357]
71. SGSM3 ENSGALG00000012033 1839 0.913 - - - - - - - 0.913 - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
72. SDCBP ENSGALG00000015436 1228 0.911 - - - - - - 0.911 - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
73. GREB1 ENSGALG00000016455 12794 0.911 - - - - - - - 0.911 - - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
74. SLC8B1 ENSGALG00000008337 42 0.9 - - - - - - 0.900 - - - solute carrier family 8 member B1 [Source:HGNC Symbol;Acc:HGNC:26175]
75. TUBB6 ENSGALG00000031275 17690 0.9 - - - - - - - 0.900 - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
76. HBE 329974 0.9 - - - - - - - 0.900 - - hemoglobin subunit epsilon
77. HRAS1 HRAS1 7988 0.899 - - - - - - - 0.899 - -
78. FYTTD1 ENSGALG00000007581 9341 0.896 - - - - - - - 0.896 - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
79. BTBD1 ENSGALG00000006020 14157 0.893 - - - - - - - 0.893 - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
80. KIAA1919 KIAA1919 58 0.892 - - - - - 0.892 - - - -
81. GLTSCR1L 18 0.891 - - - - - 0.891 - - - - GLTSCR1 like, transcript variant X4
82. ATP6V1C1 ENSGALG00000034099 9898 0.891 - - - - - - - 0.891 - - ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]
83. GPR18 ENSGALG00000022750 36 0.891 - - - - - - 0.891 - - - G protein-coupled receptor 18 [Source:HGNC Symbol;Acc:HGNC:4472]
84. ERP29 ENSGALG00000023510 47100 0.891 - - - - - - - 0.891 - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
85. YTHDF2 ENSGALG00000034831 15118 0.888 - - - - - - - 0.888 - - YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
86. NMRK2 ENSGALG00000025751 57 0.883 - - - - - - 0.883 - - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
87. IP6K2 ENSGALG00000005701 12539 0.88 - - - - - - - 0.880 - - inositol hexakisphosphate kinase 2 [Source:NCBI gene;Acc:416010]
88. GHR ENSGALG00000014855 131 0.88 - - - - - - 0.880 - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
89. CUL3 ENSGALG00000005108 9571 0.879 - - - - - - - 0.879 - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
90. PVALB1 PVALB1 267 0.877 - - - - - 0.877 - - - -
91. DPP10 ENSGALG00000012156 20 0.877 - - - - - 0.877 - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
92. AGO1 ENSGALG00000002249 125 0.877 - - - - - 0.877 - - - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
93. LY96 ENSGALG00000032701 18 0.877 - - - - - 0.877 - - - - lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
94. FAM208B 24 0.877 - - - - - 0.877 - - - - family with sequence similarity 208 member B, transcript variant X3
95. PPIP5K1 ENSGALG00000008385 7 0.877 - - - - - 0.877 - - - - diphosphoinositol pentakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:29023]
96. ENSGALG00000023485 ENSGALG00000023485 46 0.877 - - - - - 0.877 - - - -
97. PPM1L ENSGALG00000009537 5 0.877 - - - - - 0.877 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1L [Source:HGNC Symbol;Acc:HGNC:16381]
98. ATP6V1AL ENSGALG00000000048 21 0.877 - - - - - 0.877 - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
99. ALDH6A1 ENSGALG00000010211 29 0.877 - - - - - 0.877 - - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
100. PMPCA ENSGALG00000001950 6766 0.875 - - - - - - - 0.875 - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]

There are 195 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA