Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for P4ha1

Gene Name Gene ID Reads Annotation
P4ha1 ENSMUSG00000019916 1600 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide [Source:MGI Symbol;Acc:MGI:97463]







Genes with expression patterns similar to P4ha1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. P4ha1 ENSMUSG00000019916 1600 6 1.000 1.000 1.000 1.000 1.000 1.000 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide [Source:MGI Symbol;Acc:MGI:97463]
2. Lysmd4 ENSMUSG00000043831 336 1.729 - 0.855 - - 0.874 - LysM, putative peptidoglycan-binding, domain containing 4 [Source:MGI Symbol;Acc:MGI:1922349]
3. Mrps6 ENSMUSG00000039680 1637 1.586 - 0.826 - - 0.760 - mitochondrial ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:2153111]
4. D19Bwg1357e D19Bwg1357e 2534 1.551 - 0.827 - - 0.724 -
5. 5730455P16Rik ENSMUSG00000057181 986 1.55 - 0.849 - - 0.701 - RIKEN cDNA 5730455P16 gene [Source:MGI Symbol;Acc:MGI:1917841]
6. Spata6 ENSMUSG00000034401 624 0.901 - 0.901 - - - - spermatogenesis associated 6 [Source:MGI Symbol;Acc:MGI:1915196]
7. Wdr12 ENSMUSG00000026019 1119 0.899 - 0.899 - - - - WD repeat domain 12 [Source:MGI Symbol;Acc:MGI:1927241]
8. Nudt2 ENSMUSG00000028443 698 0.897 - 0.897 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:MGI Symbol;Acc:MGI:1913651]
9. 1810009A15Rik ENSMUSG00000071653 1783 0.895 - - - - 0.895 - RIKEN cDNA 1810009A15 gene [Source:MGI Symbol;Acc:MGI:1913526]
10. 1110051M20Rik ENSMUSG00000040591 858 0.895 - 0.895 - - - - RIKEN cDNA 1110051M20 gene [Source:MGI Symbol;Acc:MGI:1915079]
11. Cyp20a1 ENSMUSG00000049439 1294 0.894 - 0.894 - - - - cytochrome P450, family 20, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1925201]
12. Atg16l1 ENSMUSG00000026289 1129 0.893 - 0.893 - - - - autophagy related 16-like 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1924290]
13. Snx24 ENSMUSG00000024535 873 0.892 - 0.892 - - - - sorting nexing 24 [Source:MGI Symbol;Acc:MGI:1916476]
14. Mfsd7b 498 0.889 - 0.889 - - - - major facilitator superfamily domain containing 7B, transcript variant X1
15. Wdr33 ENSMUSG00000024400 1573 0.887 - 0.887 - - - - WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:1921570]
16. Mlh3 ENSMUSG00000021245 389 0.887 - 0.887 - - - - mutL homolog 3 [Source:MGI Symbol;Acc:MGI:1353455]
17. Mfsd5 ENSMUSG00000045665 541 0.887 - 0.887 - - - - major facilitator superfamily domain containing 5 [Source:MGI Symbol;Acc:MGI:2145901]
18. Mtf1 ENSMUSG00000028890 712 0.887 - 0.887 - - - - metal response element binding transcription factor 1 [Source:MGI Symbol;Acc:MGI:101786]
19. Tcf7 ENSMUSG00000000782 407 0.887 - 0.887 - - - - transcription factor 7, T cell specific [Source:MGI Symbol;Acc:MGI:98507]
20. Fam219b ENSMUSG00000032305 534 0.886 - 0.886 - - - - family with sequence similarity 219, member B [Source:MGI Symbol;Acc:MGI:1925573]
21. Rchy1 ENSMUSG00000029397 1938 0.885 - 0.885 - - - - ring finger and CHY zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1915348]
22. Xpo5 ENSMUSG00000067150 682 0.884 - 0.884 - - - - exportin 5 [Source:MGI Symbol;Acc:MGI:1913789]
23. Pithd1 ENSMUSG00000028669 709 0.883 - 0.883 - - - - PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 [Source:MGI Symbol;Acc:MGI:1913443]
24. Med21 ENSMUSG00000030291 1555 0.883 - 0.883 - - - - mediator complex subunit 21 [Source:MGI Symbol;Acc:MGI:1347064]
25. Dync1li2 ENSMUSG00000035770 2175 0.881 - 0.881 - - - - dynein, cytoplasmic 1 light intermediate chain 2 [Source:MGI Symbol;Acc:MGI:107738]
26. 2610008E11Rik ENSMUSG00000060301 1912 0.88 - 0.880 - - - - RIKEN cDNA 2610008E11 gene [Source:MGI Symbol;Acc:MGI:1919378]
27. Mbnl2 ENSMUSG00000022139 3296 0.878 - 0.878 - - - - muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
28. Fanca ENSMUSG00000032815 322 0.878 - 0.878 - - - - Fanconi anemia, complementation group A [Source:MGI Symbol;Acc:MGI:1341823]
29. Zfp654 ENSMUSG00000047141 509 0.876 - 0.876 - - - - zinc finger protein 654 [Source:MGI Symbol;Acc:MGI:1919270]
30. Gm17167 ENSMUSG00000091542 371 0.876 - 0.876 - - - - predicted gene 17167 [Source:MGI Symbol;Acc:MGI:4937994]
31. Sfxn2 ENSMUSG00000025036 1352 0.876 - 0.876 - - - - sideroflexin 2 [Source:MGI Symbol;Acc:MGI:2137678]
32. Ccdc137 ENSMUSG00000049957 859 0.876 - 0.876 - - - - coiled-coil domain containing 137 [Source:MGI Symbol;Acc:MGI:1914541]
33. Extl2 ENSMUSG00000027963 931 0.876 - 0.876 - - - - exostoses (multiple)-like 2 [Source:MGI Symbol;Acc:MGI:1889574]
34. Slc31a2 ENSMUSG00000066152 323 0.875 - 0.875 - - - - solute carrier family 31, member 2 [Source:MGI Symbol;Acc:MGI:1333844]
35. AI597468 AI597468 3278 0.874 - 0.874 - - - -
36. 4933434E20Rik ENSMUSG00000027942 2164 0.874 - 0.874 - - - - RIKEN cDNA 4933434E20 gene [Source:MGI Symbol;Acc:MGI:1914027]
37. Nat10 ENSMUSG00000027185 602 0.873 - 0.873 - - - - N-acetyltransferase 10 [Source:MGI Symbol;Acc:MGI:2138939]
38. Mocs1 ENSMUSG00000064120 232 0.871 - 0.871 - - - - molybdenum cofactor synthesis 1 [Source:MGI Symbol;Acc:MGI:1928904]
39. Prkx ENSMUSG00000035725 639 0.871 - 0.871 - - - - protein kinase, X-linked [Source:MGI Symbol;Acc:MGI:1309999]
40. Gm13349 ENSMUSG00000082520 302 0.871 - 0.871 - - - - predicted gene 13349 [Source:MGI Symbol;Acc:MGI:3649966]
41. 1110032A03Rik ENSMUSG00000037971 578 0.871 - 0.871 - - - - RIKEN cDNA 1110032A03 gene [Source:MGI Symbol;Acc:MGI:1915971]
42. Rnf217 ENSMUSG00000063760 460 0.87 - 0.870 - - - - ring finger protein 217 [Source:MGI Symbol;Acc:MGI:3610311]
43. Abhd8 ENSMUSG00000007950 711 0.87 - 0.870 - - - - abhydrolase domain containing 8 [Source:MGI Symbol;Acc:MGI:1918946]
44. Tradd ENSMUSG00000031887 165 0.869 - 0.869 - - - - TNFRSF1A-associated via death domain [Source:MGI Symbol;Acc:MGI:109200]
45. Stc1 ENSMUSG00000014813 363 0.869 - 0.869 - - - - stanniocalcin 1 [Source:MGI Symbol;Acc:MGI:109131]
46. Gabra1 ENSMUSG00000010803 177 0.869 - 0.869 - - - - gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 [Source:MGI Symbol;Acc:MGI:95613]
47. Gm26617 ENSMUSG00000097340 62 0.869 - 0.869 - - - - predicted gene, 26617 [Source:MGI Symbol;Acc:MGI:5477111]
48. Rmi1 ENSMUSG00000035367 647 0.869 - 0.869 - - - - RecQ mediated genome instability 1 [Source:MGI Symbol;Acc:MGI:1921636]
49. Ltf ENSMUSG00000032496 44 0.868 - 0.868 - - - - lactotransferrin [Source:MGI Symbol;Acc:MGI:96837]
50. Cdk5rap1 ENSMUSG00000027487 333 0.868 - 0.868 - - - - CDK5 regulatory subunit associated protein 1 [Source:MGI Symbol;Acc:MGI:1914221]
51. Dusp2 ENSMUSG00000027368 534 0.868 - 0.868 - - - - dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
52. Ndufaf3 ENSMUSG00000070283 346 0.868 - 0.868 - - - - NADH:ubiquinone oxidoreductase complex assembly factor 3 [Source:MGI Symbol;Acc:MGI:1913956]
53. Mcph1 ENSMUSG00000039842 845 0.868 - 0.868 - - - - microcephaly, primary autosomal recessive 1 [Source:MGI Symbol;Acc:MGI:2443308]
54. Chic2 ENSMUSG00000029229 3175 0.867 - 0.867 - - - - cysteine-rich hydrophobic domain 2 [Source:MGI Symbol;Acc:MGI:1921527]
55. Arhgef3 ENSMUSG00000021895 224 0.867 - 0.867 - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:MGI Symbol;Acc:MGI:1918954]
56. Bfar ENSMUSG00000022684 1500 0.867 - 0.867 - - - - bifunctional apoptosis regulator [Source:MGI Symbol;Acc:MGI:1914368]
57. Taf15 ENSMUSG00000020680 2417 0.867 - 0.867 - - - - TATA-box binding protein associated factor 15 [Source:MGI Symbol;Acc:MGI:1917689]
58. Pqlc1 ENSMUSG00000034006 467 0.867 - 0.867 - - - - PQ loop repeat containing 1 [Source:MGI Symbol;Acc:MGI:1914193]
59. B3gnt7 ENSMUSG00000079445 259 0.867 - 0.867 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:MGI Symbol;Acc:MGI:2384394]
60. Slc7a6 ENSMUSG00000031904 1103 0.866 - 0.866 - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
61. Wwp1 ENSMUSG00000041058 1490 0.866 - 0.866 - - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1861728]
62. Csgalnact2 ENSMUSG00000042042 405 0.865 - 0.865 - - - - chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:MGI Symbol;Acc:MGI:1926002]
63. Gm26799 ENSMUSG00000097579 157 0.864 - 0.864 - - - - predicted gene, 26799 [Source:MGI Symbol;Acc:MGI:5477293]
64. Xrcc6bp1 389 0.864 - 0.864 - - - - XRCC6 binding protein 1, transcript variant X3
65. Sox7 ENSMUSG00000063060 538 0.864 - 0.864 - - - - SRY (sex determining region Y)-box 7 [Source:MGI Symbol;Acc:MGI:98369]
66. Ddx52 ENSMUSG00000020677 2667 0.864 - - - - 0.864 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Source:MGI Symbol;Acc:MGI:1925644]
67. Crtc1 ENSMUSG00000003575 621 0.864 - 0.864 - - - - CREB regulated transcription coactivator 1 [Source:MGI Symbol;Acc:MGI:2142523]
68. Ttc21b ENSMUSG00000034848 584 0.864 - 0.864 - - - - tetratricopeptide repeat domain 21B [Source:MGI Symbol;Acc:MGI:1920918]
69. Slco5a1 ENSMUSG00000025938 586 0.864 - 0.864 - - - - solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
70. Asb6 ENSMUSG00000039483 591 0.863 - 0.863 - - - - ankyrin repeat and SOCS box-containing 6 [Source:MGI Symbol;Acc:MGI:1919573]
71. Trpc2 ENSMUSG00000100254 1435 0.863 - 0.863 - - - - transient receptor potential cation channel, subfamily C, member 2 [Source:MGI Symbol;Acc:MGI:109527]
72. Slc27a4 ENSMUSG00000059316 1108 0.863 - 0.863 - - - - solute carrier family 27 (fatty acid transporter), member 4 [Source:MGI Symbol;Acc:MGI:1347347]
73. Ppp3r1 ENSMUSG00000033953 1296 0.862 - 0.862 - - - - protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) [Source:MGI Symbol;Acc:MGI:107172]
74. Accs ENSMUSG00000040272 397 0.862 - 0.862 - - - - 1-aminocyclopropane-1-carboxylate synthase (non-functional) [Source:MGI Symbol;Acc:MGI:1919717]
75. Slc29a4 ENSMUSG00000050822 399 0.862 - 0.862 - - - - solute carrier family 29 (nucleoside transporters), member 4 [Source:MGI Symbol;Acc:MGI:2385330]
76. 9230110C19Rik 238 0.862 - 0.862 - - - - RIKEN cDNA 9230110C19 gene, transcript variant X2
77. Vps29 ENSMUSG00000029462 4052 0.861 - 0.861 - - - - VPS29 retromer complex component [Source:MGI Symbol;Acc:MGI:1928344]
78. Kcnip3 ENSMUSG00000079056 249 0.861 - 0.861 - - - - Kv channel interacting protein 3, calsenilin [Source:MGI Symbol;Acc:MGI:1929258]
79. Cox19 ENSMUSG00000045438 1299 0.861 - 0.861 - - - - cytochrome c oxidase assembly protein 19 [Source:MGI Symbol;Acc:MGI:1915283]
80. Polm ENSMUSG00000020474 386 0.86 - 0.860 - - - - polymerase (DNA directed), mu [Source:MGI Symbol;Acc:MGI:1860191]
81. Slc25a23 ENSMUSG00000046329 1286 0.86 - 0.860 - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 [Source:MGI Symbol;Acc:MGI:1914222]
82. Acss1 ENSMUSG00000027452 285 0.86 - 0.860 - - - - acyl-CoA synthetase short-chain family member 1 [Source:MGI Symbol;Acc:MGI:1915988]
83. Rbm3 ENSMUSG00000031167 840 0.86 - 0.860 - - - - RNA binding motif (RNP1, RRM) protein 3 [Source:MGI Symbol;Acc:MGI:1099460]
84. Kctd9 ENSMUSG00000034327 450 0.859 - 0.859 - - - - potassium channel tetramerisation domain containing 9 [Source:MGI Symbol;Acc:MGI:2145579]
85. Shc2 ENSMUSG00000020312 611 0.859 - 0.859 - - - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:MGI Symbol;Acc:MGI:106180]
86. Fbxl16 ENSMUSG00000025738 443 0.859 - 0.859 - - - - F-box and leucine-rich repeat protein 16 [Source:MGI Symbol;Acc:MGI:2448488]
87. Thumpd3 ENSMUSG00000030264 1038 0.859 - 0.859 - - - - THUMP domain containing 3 [Source:MGI Symbol;Acc:MGI:1277973]
88. Mastl ENSMUSG00000026779 843 0.858 - 0.858 - - - - microtubule associated serine/threonine kinase-like [Source:MGI Symbol;Acc:MGI:1914371]
89. Cops7a ENSMUSG00000030127 1698 0.858 - 0.858 - - - - COP9 signalosome subunit 7A [Source:MGI Symbol;Acc:MGI:1349400]
90. Nr2c1 ENSMUSG00000005897 852 0.858 - 0.858 - - - - nuclear receptor subfamily 2, group C, member 1 [Source:MGI Symbol;Acc:MGI:1352465]
91. Dhx16 ENSMUSG00000024422 828 0.858 - 0.858 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:MGI Symbol;Acc:MGI:1916442]
92. St7l ENSMUSG00000045576 810 0.858 - 0.858 - - - - suppression of tumorigenicity 7-like [Source:MGI Symbol;Acc:MGI:2386964]
93. Itsn2 ENSMUSG00000020640 395 0.858 - 0.858 - - - - intersectin 2 [Source:MGI Symbol;Acc:MGI:1338049]
94. Leprot ENSMUSG00000035212 3389 0.857 - 0.857 - - - - leptin receptor overlapping transcript [Source:MGI Symbol;Acc:MGI:2687005]
95. Pygb ENSMUSG00000033059 1366 0.857 - 0.857 - - - - brain glycogen phosphorylase [Source:MGI Symbol;Acc:MGI:97828]
96. Caml ENSMUSG00000021501 3056 0.857 - 0.857 - - - - calcium modulating ligand [Source:MGI Symbol;Acc:MGI:104728]
97. Snhg6 ENSMUSG00000098234 549 0.857 - 0.857 - - - - small nucleolar RNA host gene 6 [Source:MGI Symbol;Acc:MGI:1921074]
98. Klhl18 ENSMUSG00000054792 443 0.856 - 0.856 - - - - kelch-like 18 [Source:MGI Symbol;Acc:MGI:2143315]
99. Zmym5 ENSMUSG00000040123 1253 0.856 - 0.856 - - - - zinc finger, MYM-type 5 [Source:MGI Symbol;Acc:MGI:3041170]
100. Gm11223 ENSMUSG00000046341 988 0.854 - 0.854 - - - - predicted gene 11223 [Source:MGI Symbol;Acc:MGI:3651631]

There are 336 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA