Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Otx2

Gene Name Gene ID Reads Annotation
Otx2 ENSMUSG00000021848 4 orthodenticle homeobox 2 [Source:MGI Symbol;Acc:MGI:97451]







Genes with expression patterns similar to Otx2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Otx2 ENSMUSG00000021848 4 2 - - - 1.000 - 1.000 orthodenticle homeobox 2 [Source:MGI Symbol;Acc:MGI:97451]
2. Gm26807 ENSMUSG00000097484 14 1 - - - - - 1.000 predicted gene, 26807 [Source:MGI Symbol;Acc:MGI:5477301]
3. Gm26643 ENSMUSG00000097681 2 1 - - - 1.000 - - predicted gene, 26643 [Source:MGI Symbol;Acc:MGI:5477137]
4. Zcwpw1 ENSMUSG00000037108 40 0.972 - - - - - 0.972 zinc finger, CW type with PWWP domain 1 [Source:MGI Symbol;Acc:MGI:2685899]
5. Gm5531 Gm5531 6 0.922 - - - - - 0.922
6. Gm26169 ENSMUSG00000089045 1 0.922 - - - - - 0.922 predicted gene, 26169 [Source:MGI Symbol;Acc:MGI:5455946]
7. Gm5384 ENSMUSG00000080998 2 0.922 - - - - - 0.922 predicted gene 5384 [Source:MGI Symbol;Acc:MGI:3646660]
8. Hist1h1t ENSMUSG00000036211 3 0.922 - - - - - 0.922 histone cluster 1, H1t [Source:MGI Symbol;Acc:MGI:1888530]
9. Anp32-ps ENSMUSG00000069913 11 0.922 - - - - - 0.922 acidic (leucine-rich) nuclear phosphoprotein 32 family, pseudogene [Source:MGI Symbol;Acc:MGI:3525200]
10. Gm13182 ENSMUSG00000082580 7 0.922 - - - - - 0.922 predicted gene 13182 [Source:MGI Symbol;Acc:MGI:3650465]
11. Dnali1 ENSMUSG00000042707 6 0.922 - - - - - 0.922 dynein, axonemal, light intermediate polypeptide 1 [Source:MGI Symbol;Acc:MGI:1922813]
12. Vmn2r116 ENSMUSG00000090966 1 0.922 - - - - - 0.922 vomeronasal 2, receptor 116 [Source:MGI Symbol;Acc:MGI:3646674]
13. Dnah9 ENSMUSG00000056752 16 0.897 - - - - - 0.897 dynein, axonemal, heavy chain 9 [Source:MGI Symbol;Acc:MGI:1289279]
14. Il21r ENSMUSG00000030745 11 0.892 - - - - - 0.892 interleukin 21 receptor [Source:MGI Symbol;Acc:MGI:1890475]
15. 3830417A13Rik ENSMUSG00000031179 13 0.883 - - - - - 0.883 RIKEN cDNA 3830417A13 gene [Source:MGI Symbol;Acc:MGI:1917946]
16. Rims4 ENSMUSG00000035226 11 0.883 - - - - - 0.883 regulating synaptic membrane exocytosis 4 [Source:MGI Symbol;Acc:MGI:2674366]
17. Gm23817 ENSMUSG00000089074 4 0.881 - - - - - 0.881 predicted gene, 23817 [Source:MGI Symbol;Acc:MGI:5453594]
18. Bcl3 ENSMUSG00000053175 27 0.881 - - - - - 0.881 B cell leukemia/lymphoma 3 [Source:MGI Symbol;Acc:MGI:88140]
19. Gm16169 ENSMUSG00000089907 8 0.871 - - - - - 0.871 predicted gene 16169 [Source:MGI Symbol;Acc:MGI:3802011]
20. Gm26945 ENSMUSG00000098061, ENSMUSG00000106716 59 0.869 - - - - - 0.869 predicted gene, 26945 [Source:MGI Symbol;Acc:MGI:5504060]
21. Gm14150 ENSMUSG00000082809 13 0.86 - - - - - 0.860 predicted gene 14150 [Source:MGI Symbol;Acc:MGI:3651006]
22. Gkn3 ENSMUSG00000030048 4 0.856 - - - - - 0.856 gastrokine 3 [Source:MGI Symbol;Acc:MGI:1916138]
23. Gm3345 Gm3345 8 0.856 - - - - - 0.856
24. Cpne7 ENSMUSG00000034796 49 0.852 - - - 0.852 - - copine VII [Source:MGI Symbol;Acc:MGI:2142747]
25. Dnase2b ENSMUSG00000028185 9 0.852 - - - - - 0.852 deoxyribonuclease II beta [Source:MGI Symbol;Acc:MGI:1913283]
26. Gm26894 ENSMUSG00000097453 4 0.851 - - - - - 0.851 predicted gene, 26894 [Source:MGI Symbol;Acc:MGI:5477388]
27. Gm12224 ENSMUSG00000085888 7 0.849 - - - - - 0.849 predicted gene 12224 [Source:MGI Symbol;Acc:MGI:3651369]
28. C130026I21Rik ENSMUSG00000052477 18 0.848 - - - - - 0.848 RIKEN cDNA C130026I21 gene [Source:MGI Symbol;Acc:MGI:3612702]
29. Smim6 ENSMUSG00000075420 6 0.841 - - - - - 0.841 small integral membrane protein 6 [Source:MGI Symbol;Acc:MGI:1915778]
30. Hnf4a ENSMUSG00000017950 358 0.84 - - - - - 0.840 hepatic nuclear factor 4, alpha [Source:MGI Symbol;Acc:MGI:109128]
31. Itih3 ENSMUSG00000006522 12 0.84 - - - - - 0.840 inter-alpha trypsin inhibitor, heavy chain 3 [Source:MGI Symbol;Acc:MGI:96620]
32. 2410114N07Rik 2410114N07Rik 11 0.839 - - - - - 0.839
33. AI661453 ENSMUSG00000034382 33 0.839 - - - - - 0.839 expressed sequence AI661453 [Source:MGI Symbol;Acc:MGI:2146908]
34. Gm26520 ENSMUSG00000097429 24 0.837 - - - - - 0.837 predicted gene, 26520 [Source:MGI Symbol;Acc:MGI:5477014]
35. Itgb4 ENSMUSG00000020758 43 0.834 - - - - - 0.834 integrin beta 4 [Source:MGI Symbol;Acc:MGI:96613]
36. Kcnn2 ENSMUSG00000054477 37 0.834 - - - - - 0.834 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 [Source:MGI Symbol;Acc:MGI:2153182]
37. H2-Oa ENSMUSG00000024334 12 0.827 - - - - - 0.827 histocompatibility 2, O region alpha locus [Source:MGI Symbol;Acc:MGI:95924]
38. Esm1 ENSMUSG00000042379 29 0.822 - - - 0.822 - - endothelial cell-specific molecule 1 [Source:MGI Symbol;Acc:MGI:1918940]
39. Gm12663 ENSMUSG00000101316 20 0.82 - - - - - 0.820 predicted gene 12663 [Source:MGI Symbol;Acc:MGI:3652168]
40. Klf15 ENSMUSG00000030087 33 0.819 - - - - - 0.819 Kruppel-like factor 15 [Source:MGI Symbol;Acc:MGI:1929988]
41. Gm12543 ENSMUSG00000080772 12 0.819 - - - - - 0.819 predicted gene 12543 [Source:MGI Symbol;Acc:MGI:3649591]
42. Pirb ENSMUSG00000058818 16 0.819 - - - - - 0.819 paired Ig-like receptor B [Source:MGI Symbol;Acc:MGI:894311]
43. Sp100 ENSMUSG00000026222 33 0.809 - - - - - 0.809 nuclear antigen Sp100 [Source:MGI Symbol;Acc:MGI:109561]
44. Cnga3 ENSMUSG00000026114 7 0.807 - - - - - 0.807 cyclic nucleotide gated channel alpha 3 [Source:MGI Symbol;Acc:MGI:1341818]
45. Atp13a5 ENSMUSG00000048939 12 0.804 - - - 0.804 - - ATPase type 13A5 [Source:MGI Symbol;Acc:MGI:2444068]
46. RP23-296I6.5 RP23-296I6.5 46 0.801 - - - - - 0.801
47. Stk32a ENSMUSG00000039954 20 0.8 - - - 0.800 - - serine/threonine kinase 32A [Source:MGI Symbol;Acc:MGI:2442403]
48. Prss35 ENSMUSG00000033491 245 0.796 - - - - - 0.796 protease, serine 35 [Source:MGI Symbol;Acc:MGI:2444800]
49. Tcam1 ENSMUSG00000020712 7 0.792 - - - - - 0.792 testicular cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1923120]
50. Gm10020 ENSMUSG00000057262 87 0.788 - - - - - 0.788 predicted pseudogene 10020 [Source:MGI Symbol;Acc:MGI:3642192]
51. Tmem27 76 0.784 - - - - - 0.784 transmembrane protein 27, transcript variant 1
52. Gm10167 ENSMUSG00000066554 67 0.769 - - - - - 0.769 predicted pseudogene 10167 [Source:MGI Symbol;Acc:MGI:3704263]
53. 2700046A07Rik ENSMUSG00000041789 26 0.755 - - - - - 0.755 RIKEN cDNA 2700046A07 gene [Source:MGI Symbol;Acc:MGI:1919803]
54. Gm4335 ENSMUSG00000097989 113 0.753 - - - - - 0.753 predicted gene 4335 [Source:MGI Symbol;Acc:MGI:3782519]
55. Ccl9 ENSMUSG00000019122 84 0.752 - - - - - 0.752 chemokine (C-C motif) ligand 9 [Source:MGI Symbol;Acc:MGI:104533]
56. Shisa6 ENSMUSG00000053930 39 0.751 - - - - - 0.751 shisa family member 6 [Source:MGI Symbol;Acc:MGI:2685725]
57. Gm6316 ENSMUSG00000078370 16 0.751 - - - - - 0.751 predicted pseudogene 6316 [Source:MGI Symbol;Acc:MGI:3646088]
58. Bmp3 ENSMUSG00000029335 15 0.737 - - - - - 0.737 bone morphogenetic protein 3 [Source:MGI Symbol;Acc:MGI:88179]
59. Plk5 ENSMUSG00000035486 3 0.729 - - - - - 0.729 polo like kinase 5 [Source:MGI Symbol;Acc:MGI:3026984]
60. Gm10912 ENSMUSG00000078091 9 0.727 - - - - - 0.727 predicted gene 10912 [Source:MGI Symbol;Acc:MGI:3809094]
61. Dnah7b ENSMUSG00000041144 76 0.726 - - - - - 0.726 dynein, axonemal, heavy chain 7B [Source:MGI Symbol;Acc:MGI:2684953]
62. Hist1h2bj ENSMUSG00000069300 84 0.719 - - - 0.719 - - histone cluster 1, H2bj [Source:MGI Symbol;Acc:MGI:2448388]
63. Ptgs2 ENSMUSG00000032487 6 0.717 - - - - - 0.717 prostaglandin-endoperoxide synthase 2 [Source:MGI Symbol;Acc:MGI:97798]
64. Gpr137c ENSMUSG00000049092 15 0.713 - - - 0.713 - - G protein-coupled receptor 137C [Source:MGI Symbol;Acc:MGI:1917963]
65. Btnl10 ENSMUSG00000020490 1 0.71 - - - 0.710 - - butyrophilin-like 10 [Source:MGI Symbol;Acc:MGI:2182073]
66. Neurog3 ENSMUSG00000044312 22 0.71 - - - 0.710 - - neurogenin 3 [Source:MGI Symbol;Acc:MGI:893591]
67. Gm15540 ENSMUSG00000086561 2 0.71 - - - 0.710 - - predicted gene 15540 [Source:MGI Symbol;Acc:MGI:3782988]
68. Krt12 ENSMUSG00000020912 1 0.71 - - - 0.710 - - keratin 12 [Source:MGI Symbol;Acc:MGI:96687]
69. Gm12254 ENSMUSG00000085342 13 0.71 - - - 0.710 - - predicted gene 12254 [Source:MGI Symbol;Acc:MGI:3650324]
70. Gm5431 ENSMUSG00000058163, ENSMUSG00000116032, ENSMUSG00000116047 10 0.71 - - - 0.710 - - predicted gene 5431 [Source:NCBI gene;Acc:432555]
71. C130046K22Rik ENSMUSG00000085154 3 0.71 - - - 0.710 - - RIKEN cDNA C130046K22 gene [Source:MGI Symbol;Acc:MGI:3026935]
72. C430002E04Rik C430002E04Rik 2 0.71 - - - 0.710 - -
73. mmu-mir-6236 mmu-mir-6236 2 0.71 - - - 0.710 - -
74. Gm13619 ENSMUSG00000052865 2 0.71 - - - 0.710 - - predicted gene 13619 [Source:MGI Symbol;Acc:MGI:3702958]
75. Gm5101 Gm5101 4 0.71 - - - 0.710 - -
76. Gm26690 ENSMUSG00000097751 7 0.71 - - - 0.710 - - predicted gene, 26690 [Source:MGI Symbol;Acc:MGI:5477184]
77. Gm26646 ENSMUSG00000097685 7 0.71 - - - 0.710 - - predicted gene, 26646 [Source:MGI Symbol;Acc:MGI:5477140]
78. Rpl21-ps4 ENSMUSG00000072714 15 0.71 - - - 0.710 - - ribosomal protein L21, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3646825]
79. 4931422A03Rik ENSMUSG00000046085 1 0.71 - - - 0.710 - - RIKEN cDNA 4931422A03 gene [Source:MGI Symbol;Acc:MGI:1918236]
80. Gbp9 ENSMUSG00000029298 11 0.71 - - - 0.710 - - guanylate-binding protein 9 [Source:MGI Symbol;Acc:MGI:3605620]
81. RP23-349I13.5 RP23-349I13.5 5 0.71 - - - 0.710 - -
82. Rnf138rt1 ENSMUSG00000083695 3 0.71 - - - 0.710 - - ring finger protein 138, retrogene 1 [Source:MGI Symbol;Acc:MGI:1921514]
83. Gm11205 ENSMUSG00000084969 1 0.71 - - - 0.710 - - predicted gene 11205 [Source:MGI Symbol;Acc:MGI:3650272]
84. 4933402N03Rik ENSMUSG00000013668 1 0.71 - - - 0.710 - - RIKEN cDNA 4933402N03 gene [Source:MGI Symbol;Acc:MGI:1914681]
85. Camsap3 ENSMUSG00000044433 4 0.71 - - - 0.710 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:MGI Symbol;Acc:MGI:1916947]
86. Gm25304 Gm25304 44 0.708 - - - - - 0.708
87. Ccr5 ENSMUSG00000079227 87 0.706 - - - - - 0.706 chemokine (C-C motif) receptor 5 [Source:MGI Symbol;Acc:MGI:107182]
88. Dennd2d ENSMUSG00000027901 12 0.705 - - - - - 0.705 DENN/MADD domain containing 2D [Source:MGI Symbol;Acc:MGI:2181193]
89. Cldn7 ENSMUSG00000018569 57 0.703 - - - - - 0.703 claudin 7 [Source:MGI Symbol;Acc:MGI:1859285]
90. Gm10143 ENSMUSG00000064032 9 0.701 - - - - - 0.701 predicted gene 10143 [Source:MGI Symbol;Acc:MGI:3704492]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA