Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Otx1

Gene Name Gene ID Reads Annotation
Otx1 ENSMUSG00000005917 7 orthodenticle homeobox 1 [Source:MGI Symbol;Acc:MGI:97450]







Genes with expression patterns similar to Otx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Otx1 ENSMUSG00000005917 7 3 1.000 1.000 - 1.000 - - orthodenticle homeobox 1 [Source:MGI Symbol;Acc:MGI:97450]
2. 0610040B10Rik ENSMUSG00000089889 31 1.834 0.914 - - 0.920 - - RIKEN cDNA 0610040B10 gene [Source:MGI Symbol;Acc:MGI:1914922]
3. B3gnt8 ENSMUSG00000059479 28 1.438 0.716 0.722 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 [Source:MGI Symbol;Acc:MGI:2385269]
4. Dpcr1 8 1 1.000 - - - - - diffuse panbronchiolitis critical region 1 (human), transcript variant X1
5. Gm8649 ENSMUSG00000097669 5 1 1.000 - - - - - predicted gene 8649 [Source:MGI Symbol;Acc:MGI:3644257]
6. Gm26774 ENSMUSG00000097356 14 1 1.000 - - - - - predicted gene, 26774 [Source:MGI Symbol;Acc:MGI:5477268]
7. Gm6605 ENSMUSG00000094920 2 1 1.000 - - - - - predicted gene 6605 [Source:MGI Symbol;Acc:MGI:3644762]
8. Abca15 ENSMUSG00000054746 3 1 1.000 - - - - - ATP-binding cassette, sub-family A (ABC1), member 15 [Source:MGI Symbol;Acc:MGI:2388709]
9. Gm26513 ENSMUSG00000097150 8 1 1.000 - - - - - predicted gene, 26513 [Source:MGI Symbol;Acc:MGI:5477007]
10. Tpt1-ps6 ENSMUSG00000084284 6 1 1.000 - - - - - tumor protein, translationally-controlled, pseudogene 6 [Source:MGI Symbol;Acc:MGI:2665000]
11. Gsdma2 ENSMUSG00000017211 2 1 1.000 - - - - - gasdermin A2 [Source:MGI Symbol;Acc:MGI:1921490]
12. Gm12042 ENSMUSG00000084048 8 0.996 0.996 - - - - - predicted gene 12042 [Source:MGI Symbol;Acc:MGI:3651845]
13. Lonrf3 ENSMUSG00000016239 10 0.991 0.991 - - - - - LON peptidase N-terminal domain and ring finger 3 [Source:MGI Symbol;Acc:MGI:1921615]
14. Gm15454 ENSMUSG00000096712 6 0.985 0.985 - - - - - predicted gene 15454 [Source:MGI Symbol;Acc:MGI:3644262]
15. 4930431F12Rik ENSMUSG00000062496 29 0.975 0.975 - - - - - RIKEN cDNA 4930431F12 gene [Source:MGI Symbol;Acc:MGI:1923033]
16. 9330159N05Rik 9330159N05Rik 14 0.974 0.974 - - - - -
17. Dcst1 ENSMUSG00000042672 3 0.964 0.964 - - - - - DC-STAMP domain containing 1 [Source:MGI Symbol;Acc:MGI:1925022]
18. E030024N20Rik ENSMUSG00000057990 16 0.964 0.964 - - - - - RIKEN cDNA E030024N20 gene [Source:MGI Symbol;Acc:MGI:2442009]
19. Irak3 ENSMUSG00000020227 16 0.964 0.964 - - - - - interleukin-1 receptor-associated kinase 3 [Source:MGI Symbol;Acc:MGI:1921164]
20. Ccl17 ENSMUSG00000031780 10 0.961 0.961 - - - - - chemokine (C-C motif) ligand 17 [Source:MGI Symbol;Acc:MGI:1329039]
21. 2810455O05Rik ENSMUSG00000085030 37 0.958 0.958 - - - - - RIKEN cDNA 2810455O05 gene [Source:MGI Symbol;Acc:MGI:1920072]
22. Gm12089 ENSMUSG00000085165 23 0.943 0.943 - - - - - predicted gene 12089 [Source:MGI Symbol;Acc:MGI:3650341]
23. Trim58 ENSMUSG00000037124 3 0.941 - - - 0.941 - - tripartite motif-containing 58 [Source:MGI Symbol;Acc:MGI:2684862]
24. Gm5292 ENSMUSG00000059565 22 0.941 - - - 0.941 - - predicted gene 5292 [Source:MGI Symbol;Acc:MGI:3645663]
25. Rps15a-ps4 ENSMUSG00000083757 11 0.941 - - - 0.941 - - ribosomal protein S15A, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3652187]
26. Gm1110 ENSMUSG00000079644 2 0.941 - - - 0.941 - - predicted gene 1110 [Source:MGI Symbol;Acc:MGI:2685956]
27. Gm26823 ENSMUSG00000096926 8 0.941 - - - 0.941 - - predicted gene, 26823 [Source:MGI Symbol;Acc:MGI:5477317]
28. 1110002L01Rik ENSMUSG00000071456 4 0.941 - - - 0.941 - - RIKEN cDNA 1110002L01 gene [Source:MGI Symbol;Acc:MGI:1915821]
29. 5730412P04Rik ENSMUSG00000087553 2 0.941 - - - 0.941 - - RIKEN cDNA 5730412P04 gene [Source:MGI Symbol;Acc:MGI:1917741]
30. Gm10293 ENSMUSG00000070490 15 0.941 - - - 0.941 - - predicted pseudogene 10293 [Source:MGI Symbol;Acc:MGI:3704216]
31. Gm12038 ENSMUSG00000082157 6 0.941 - - - 0.941 - - predicted gene 12038 [Source:MGI Symbol;Acc:MGI:3651601]
32. Slc15a1 ENSMUSG00000025557 5 0.941 - - - 0.941 - - solute carrier family 15 (oligopeptide transporter), member 1 [Source:MGI Symbol;Acc:MGI:1861376]
33. Gm6798 ENSMUSG00000082496 2 0.941 - - - 0.941 - - predicted gene 6798 [Source:MGI Symbol;Acc:MGI:3646258]
34. Clec4g ENSMUSG00000074491 17 0.941 - - - 0.941 - - C-type lectin domain family 4, member g [Source:MGI Symbol;Acc:MGI:1923113]
35. 4930519G04Rik ENSMUSG00000029564 2 0.941 - - - 0.941 - - RIKEN cDNA 4930519G04 gene [Source:MGI Symbol;Acc:MGI:1914843]
36. Snord73a ENSMUSG00000064984 35 0.941 - 0.941 - - - - small nucleolar RNA, C/D box U73A [Source:MGI Symbol;Acc:MGI:1321388]
37. Gm15764 ENSMUSG00000087556, ENSMUSG00000103450 4 0.941 - - - 0.941 - - predicted gene 15764 [Source:MGI Symbol;Acc:MGI:3783206]
38. Gm13637 Gm13637 2 0.941 - - - 0.941 - -
39. RMST RMST 10 0.941 - - - 0.941 - -
40. 4930578M01Rik ENSMUSG00000097587 7 0.941 - - - 0.941 - - RIKEN cDNA 4930578M01 gene [Source:MGI Symbol;Acc:MGI:1923201]
41. Klhdc1 ENSMUSG00000051890 36 0.94 0.940 - - - - - kelch domain containing 1 [Source:MGI Symbol;Acc:MGI:2672853]
42. Gm12013 ENSMUSG00000082099 4 0.94 0.940 - - - - - predicted gene 12013 [Source:MGI Symbol;Acc:MGI:3651371]
43. Wnt3 ENSMUSG00000000125 142 0.929 - - - 0.929 - - wingless-type MMTV integration site family, member 3 [Source:MGI Symbol;Acc:MGI:98955]
44. RP23-235K2.1 RP23-235K2.1 2 0.928 - 0.928 - - - -
45. Gm22540 ENSMUSG00000088793 2 0.928 - 0.928 - - - - predicted gene, 22540 [Source:MGI Symbol;Acc:MGI:5452317]
46. Gm15214 ENSMUSG00000082970 2 0.928 - 0.928 - - - - predicted gene 15214 [Source:MGI Symbol;Acc:MGI:3705751]
47. Gm5864 ENSMUSG00000107211 11 0.928 - 0.928 - - - - predicted gene 5864 [Source:MGI Symbol;Acc:MGI:3648579]
48. Gm26594 ENSMUSG00000097189 7 0.928 - 0.928 - - - - predicted gene, 26594 [Source:MGI Symbol;Acc:MGI:5477088]
49. Clec7a ENSMUSG00000079293 35 0.928 0.928 - - - - - C-type lectin domain family 7, member a [Source:MGI Symbol;Acc:MGI:1861431]
50. Gm11986 ENSMUSG00000087637 3 0.928 - 0.928 - - - - predicted gene 11986 [Source:MGI Symbol;Acc:MGI:3650604]
51. Gm9866 ENSMUSG00000094002 4 0.928 - 0.928 - - - - predicted gene 9866 [Source:MGI Symbol;Acc:MGI:3643118]
52. Gm22265 ENSMUSG00000094131 12 0.928 - 0.928 - - - - predicted gene, 22265 [Source:MGI Symbol;Acc:MGI:5452042]
53. Pabpc6 ENSMUSG00000046173 3 0.928 - 0.928 - - - - poly(A) binding protein, cytoplasmic 6 [Source:MGI Symbol;Acc:MGI:1914793]
54. Gm14015 ENSMUSG00000087226 3 0.928 - 0.928 - - - - predicted gene 14015 [Source:MGI Symbol;Acc:MGI:3649269]
55. Gm23346 ENSMUSG00000065750 54 0.927 0.927 - - - - - predicted gene, 23346 [Source:MGI Symbol;Acc:MGI:5453123]
56. A730090N16Rik ENSMUSG00000090120 19 0.92 0.920 - - - - - RIKEN cDNA A730090N16 gene [Source:MGI Symbol;Acc:MGI:2442748]
57. Gm6808 ENSMUSG00000090162 21 0.918 0.918 - - - - - predicted gene 6808 [Source:MGI Symbol;Acc:MGI:3645881]
58. Oit1 ENSMUSG00000021749 8 0.917 0.917 - - - - - oncoprotein induced transcript 1 [Source:MGI Symbol;Acc:MGI:1201784]
59. Mettl21c ENSMUSG00000047343 13 0.912 - - - 0.912 - - methyltransferase like 21C [Source:MGI Symbol;Acc:MGI:3611450]
60. C130026I21Rik ENSMUSG00000052477 18 0.91 - 0.910 - - - - RIKEN cDNA C130026I21 gene [Source:MGI Symbol;Acc:MGI:3612702]
61. Gm10480 Gm10480 7 0.909 0.909 - - - - -
62. Zfp119a ENSMUSG00000057835 58 0.906 0.906 - - - - - zinc finger protein 119a [Source:MGI Symbol;Acc:MGI:1345189]
63. Fabp4 ENSMUSG00000062515 48 0.905 0.905 - - - - - fatty acid binding protein 4, adipocyte [Source:MGI Symbol;Acc:MGI:88038]
64. 1110035M17Rik 1110035M17Rik 27 0.899 - - - 0.899 - -
65. Ccdc159 ENSMUSG00000006241 15 0.899 0.899 - - - - - coiled-coil domain containing 159 [Source:MGI Symbol;Acc:MGI:1914369]
66. Srsf4 ENSMUSG00000028911 20 0.894 - 0.894 - - - - serine/arginine-rich splicing factor 4 [Source:MGI Symbol;Acc:MGI:1890577]
67. Gm26049 ENSMUSG00000087938 22 0.894 - 0.894 - - - - predicted gene, 26049 [Source:MGI Symbol;Acc:MGI:5455826]
68. Gm12247 ENSMUSG00000081223 16 0.893 0.893 - - - - - predicted gene 12247 [Source:MGI Symbol;Acc:MGI:3649489]
69. Gm17296 14 0.893 0.893 - - - - - predicted gene, 17296, transcript variant X1
70. Snora7a ENSMUSG00000064563 7 0.892 0.892 - - - - - small nucleolar RNA, H/ACA box 7A [Source:MGI Symbol;Acc:MGI:3819512]
71. Pde3a ENSMUSG00000041741 6 0.89 0.890 - - - - - phosphodiesterase 3A, cGMP inhibited [Source:MGI Symbol;Acc:MGI:1860764]
72. Gm216 Gm216 18 0.884 0.884 - - - - -
73. Gm20430 ENSMUSG00000092358 65 0.883 0.883 - - - - - predicted gene 20430 [Source:MGI Symbol;Acc:MGI:5141895]
74. Clec2h ENSMUSG00000030364 4 0.88 0.880 - - - - - C-type lectin domain family 2, member h [Source:MGI Symbol;Acc:MGI:2136934]
75. Gm6733 ENSMUSG00000084329 8 0.877 - - - 0.877 - - predicted gene 6733 [Source:MGI Symbol;Acc:MGI:3645402]
76. Gm11647 Gm11647 13 0.877 - - - 0.877 - -
77. Gm11694 ENSMUSG00000081376 9 0.874 0.874 - - - - - predicted gene 11694 [Source:MGI Symbol;Acc:MGI:3650243]
78. Frmd3 ENSMUSG00000049122 49 0.872 0.872 - - - - - FERM domain containing 3 [Source:MGI Symbol;Acc:MGI:2442466]
79. En2 ENSMUSG00000039095 32 0.865 - 0.865 - - - - engrailed 2 [Source:MGI Symbol;Acc:MGI:95390]
80. Barhl1 ENSMUSG00000026805 447 0.863 - - - 0.863 - - BarH like homeobox 1 [Source:MGI Symbol;Acc:MGI:1859288]
81. Hist1h2bp ENSMUSG00000069308 53 0.863 0.863 - - - - - histone cluster 1, H2bp [Source:MGI Symbol;Acc:MGI:2448409]
82. Gm26761 ENSMUSG00000097668 3 0.862 - - - 0.862 - - predicted gene, 26761 [Source:MGI Symbol;Acc:MGI:5477255]
83. Rpl7a-ps3 ENSMUSG00000068579 36 0.862 0.862 - - - - - ribosomal protein L7A, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3643413]
84. RP23-296I6.5 RP23-296I6.5 46 0.862 - - - 0.862 - -
85. Cdrt4 ENSMUSG00000042200 3 0.858 - 0.858 - - - - CMT1A duplicated region transcript 4 [Source:MGI Symbol;Acc:MGI:1913588]
86. Pdzd7 ENSMUSG00000074818 11 0.858 0.858 - - - - - PDZ domain containing 7 [Source:MGI Symbol;Acc:MGI:3608325]
87. Gm14046 ENSMUSG00000084328 15 0.857 - - - 0.857 - - predicted gene 14046 [Source:MGI Symbol;Acc:MGI:3650215]
88. Syt12 ENSMUSG00000049303 17 0.855 0.855 - - - - - synaptotagmin XII [Source:MGI Symbol;Acc:MGI:2159601]
89. C030014I23Rik ENSMUSG00000060380 18 0.851 - - - 0.851 - - RIKEN cDNA C030014I23 gene [Source:MGI Symbol;Acc:MGI:1924631]
90. Calr3 ENSMUSG00000019732 16 0.849 - 0.849 - - - - calreticulin 3 [Source:MGI Symbol;Acc:MGI:1920566]
91. Pcsk1 ENSMUSG00000021587 20 0.848 - - - 0.848 - - proprotein convertase subtilisin/kexin type 1 [Source:MGI Symbol;Acc:MGI:97511]
92. Gm6177 ENSMUSG00000057499 11 0.846 0.846 - - - - - predicted gene 6177 [Source:MGI Symbol;Acc:MGI:3643753]
93. Gm22716 ENSMUSG00000095178 30 0.843 - 0.843 - - - - predicted gene, 22716 [Source:MGI Symbol;Acc:MGI:5452493]
94. 4930404I05Rik ENSMUSG00000087354 13 0.843 - 0.843 - - - - RIKEN cDNA 4930404I05 gene [Source:MGI Symbol;Acc:MGI:1914644]
95. AF529169 ENSMUSG00000039313 18 0.842 0.842 - - - - - cDNA sequence AF529169 [Source:MGI Symbol;Acc:MGI:2667167]
96. Ccdc79 Ccdc79 24 0.842 - 0.842 - - - -
97. Zscan25 ENSMUSG00000070420 12 0.839 - - - 0.839 - - zinc finger and SCAN domain containing 25 [Source:MGI Symbol;Acc:MGI:3647079]
98. 2010107G12Rik 16 0.836 0.836 - - - - - RIKEN cDNA 2010107G12 gene, transcript variant X2
99. Ccnb1ip1 ENSMUSG00000071470 5 0.836 - - - 0.836 - - cyclin B1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2685134]
100. Capsl ENSMUSG00000039676 25 0.836 - 0.836 - - - - calcyphosine-like [Source:MGI Symbol;Acc:MGI:1922818]

There are 92 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA