Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Otub1

Gene Name Gene ID Reads Annotation
Otub1 ENSMUSG00000024767 2359 OTU domain, ubiquitin aldehyde binding 1 [Source:MGI Symbol;Acc:MGI:2147616]







Genes with expression patterns similar to Otub1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Otub1 ENSMUSG00000024767 2359 6 1.000 1.000 1.000 1.000 1.000 1.000 OTU domain, ubiquitin aldehyde binding 1 [Source:MGI Symbol;Acc:MGI:2147616]
2. Zfp114 ENSMUSG00000068962 1595 0.858 0.858 - - - - - zinc finger protein 114 [Source:MGI Symbol;Acc:MGI:3037815]
3. Zfp708 ENSMUSG00000058883 731 0.854 0.854 - - - - - zinc finger protein 708 [Source:MGI Symbol;Acc:MGI:3040674]
4. Ercc8 ENSMUSG00000021694 1159 0.853 0.853 - - - - - excision repaiross-complementing rodent repair deficiency, complementation group 8 [Source:MGI Symbol;Acc:MGI:1919241]
5. Rnaseh2a ENSMUSG00000052926 1911 0.853 0.853 - - - - - ribonuclease H2, large subunit [Source:MGI Symbol;Acc:MGI:1916974]
6. Polr2i ENSMUSG00000019738 699 0.851 0.851 - - - - - polymerase (RNA) II (DNA directed) polypeptide I [Source:MGI Symbol;Acc:MGI:1917170]
7. Prr13 ENSMUSG00000023048 1826 0.848 0.848 - - - - - proline rich 13 [Source:MGI Symbol;Acc:MGI:1913401]
8. Ntn3 661 0.846 0.846 - - - - - netrin 3
9. Cwc25 ENSMUSG00000018541 2817 0.846 - - - - 0.846 - CWC25 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1914730]
10. Bop1 ENSMUSG00000022557 5004 0.839 0.839 - - - - - block of proliferation 1 [Source:MGI Symbol;Acc:MGI:1334460]
11. Zfp760 ENSMUSG00000067928 1275 0.838 0.838 - - - - - zinc finger protein 760 [Source:MGI Symbol;Acc:MGI:2679257]
12. Stam ENSMUSG00000026718 2341 0.836 0.836 - - - - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:MGI Symbol;Acc:MGI:1329014]
13. Ctnnbip1 ENSMUSG00000028988 3409 0.835 0.835 - - - - - catenin beta interacting protein 1 [Source:MGI Symbol;Acc:MGI:1915756]
14. Slc35a1 ENSMUSG00000028293 2450 0.834 0.834 - - - - - solute carrier family 35 (CMP-sialic acid transporter), member 1 [Source:MGI Symbol;Acc:MGI:1345622]
15. 4932438A13Rik ENSMUSG00000037270 1496 0.833 0.833 - - - - - RIKEN cDNA 4932438A13 gene [Source:MGI Symbol;Acc:MGI:2444631]
16. Kat6b ENSMUSG00000021767 1870 0.831 0.831 - - - - - K(lysine) acetyltransferase 6B [Source:MGI Symbol;Acc:MGI:1858746]
17. Ddx28 ENSMUSG00000045538 608 0.829 0.829 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 [Source:MGI Symbol;Acc:MGI:1919236]
18. Pwp1 ENSMUSG00000001785 2614 0.827 0.827 - - - - - PWP1 homolog, endonuclein [Source:MGI Symbol;Acc:MGI:1914735]
19. Azin1 ENSMUSG00000037458 2371 0.824 0.824 - - - - - antizyme inhibitor 1 [Source:MGI Symbol;Acc:MGI:1859169]
20. Gm8055 ENSMUSG00000096171 2231 0.822 0.822 - - - - - predicted pseudogene 8055 [Source:MGI Symbol;Acc:MGI:3643695]
21. Crb2 ENSMUSG00000035403 918 0.822 0.822 - - - - - crumbs family member 2 [Source:MGI Symbol;Acc:MGI:2679260]
22. Otud4 ENSMUSG00000036990 3016 0.82 0.820 - - - - - OTU domain containing 4 [Source:MGI Symbol;Acc:MGI:1098801]
23. Meaf6 ENSMUSG00000028863 3587 0.819 0.819 - - - - - MYST/Esa1-associated factor 6 [Source:MGI Symbol;Acc:MGI:1917338]
24. Vps4b ENSMUSG00000009907 5960 0.819 0.819 - - - - - vacuolar protein sorting 4B [Source:MGI Symbol;Acc:MGI:1100499]
25. Marveld1 ENSMUSG00000044345 836 0.817 0.817 - - - - - MARVEL (membrane-associating) domain containing 1 [Source:MGI Symbol;Acc:MGI:2147570]
26. Shank3 ENSMUSG00000022623 139 0.816 0.816 - - - - - SH3 and multiple ankyrin repeat domains 3 [Source:MGI Symbol;Acc:MGI:1930016]
27. Wdr73 ENSMUSG00000025722 956 0.816 0.816 - - - - - WD repeat domain 73 [Source:MGI Symbol;Acc:MGI:1919218]
28. Ncor2 ENSMUSG00000029478 2488 0.816 0.816 - - - - - nuclear receptor co-repressor 2 [Source:MGI Symbol;Acc:MGI:1337080]
29. Armc8 ENSMUSG00000032468 1199 0.815 0.815 - - - - - armadillo repeat containing 8 [Source:MGI Symbol;Acc:MGI:1921375]
30. Mre11a ENSMUSG00000031928 1266 0.815 0.815 - - - - - MRE11A homolog A, double strand break repair nuclease [Source:MGI Symbol;Acc:MGI:1100512]
31. Mtmr12 ENSMUSG00000039458 952 0.814 0.814 - - - - - myotubularin related protein 12 [Source:MGI Symbol;Acc:MGI:2443034]
32. Aif1l ENSMUSG00000001864 1602 0.813 0.813 - - - - - allograft inflammatory factor 1-like [Source:MGI Symbol;Acc:MGI:1919598]
33. Ccne2 ENSMUSG00000028212 419 0.813 0.813 - - - - - cyclin E2 [Source:MGI Symbol;Acc:MGI:1329034]
34. Me2 ENSMUSG00000024556 1912 0.811 0.811 - - - - - malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:MGI Symbol;Acc:MGI:2147351]
35. Utp20 ENSMUSG00000004356 1170 0.81 0.810 - - - - - UTP20 small subunit processome component [Source:MGI Symbol;Acc:MGI:1917933]
36. Zfp799 ENSMUSG00000095253 1352 0.81 0.810 - - - - - zinc finger protein 799 [Source:MGI Symbol;Acc:MGI:2443934]
37. Zfyve1 ENSMUSG00000042628 143 0.809 0.809 - - - - - zinc finger, FYVE domain containing 1 [Source:MGI Symbol;Acc:MGI:3026685]
38. Herpud1 ENSMUSG00000031770 842 0.809 0.809 - - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:MGI Symbol;Acc:MGI:1927406]
39. Dhcr24 ENSMUSG00000034926 552 0.809 0.809 - - - - - 24-dehydrocholesterol reductase [Source:MGI Symbol;Acc:MGI:1922004]
40. Gm4149 ENSMUSG00000074800 1265 0.808 0.808 - - - - - predicted pseudogene 4149 [Source:MGI Symbol;Acc:MGI:3782325]
41. Commd4 ENSMUSG00000032299 2924 0.807 0.807 - - - - - COMM domain containing 4 [Source:MGI Symbol;Acc:MGI:1913449]
42. Nek7 ENSMUSG00000026393 2327 0.807 0.807 - - - - - NIMA (never in mitosis gene a)-related expressed kinase 7 [Source:MGI Symbol;Acc:MGI:1890645]
43. Zfp281 ENSMUSG00000041483 3879 0.807 0.807 - - - - - zinc finger protein 281 [Source:MGI Symbol;Acc:MGI:3029290]
44. Zfp654 ENSMUSG00000047141 509 0.807 0.807 - - - - - zinc finger protein 654 [Source:MGI Symbol;Acc:MGI:1919270]
45. Rabif ENSMUSG00000042229 952 0.807 0.807 - - - - - RAB interacting factor [Source:MGI Symbol;Acc:MGI:2138605]
46. Gm9774 ENSMUSG00000042165 1866 0.807 - 0.807 - - - - predicted pseudogene 9774 [Source:MGI Symbol;Acc:MGI:3642386]
47. Timp1 ENSMUSG00000001131 780 0.807 0.807 - - - - - tissue inhibitor of metalloproteinase 1 [Source:MGI Symbol;Acc:MGI:98752]
48. Dgat2 ENSMUSG00000030747 207 0.806 0.806 - - - - - diacylglycerol O-acyltransferase 2 [Source:MGI Symbol;Acc:MGI:1915050]
49. Spsb1 ENSMUSG00000039911 1526 0.805 0.805 - - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:MGI Symbol;Acc:MGI:1921896]
50. Coq3 ENSMUSG00000028247 463 0.805 0.805 - - - - - coenzyme Q3 methyltransferase [Source:MGI Symbol;Acc:MGI:101813]
51. Tm7sf3 ENSMUSG00000040234 858 0.805 0.805 - - - - - transmembrane 7 superfamily member 3 [Source:MGI Symbol;Acc:MGI:1914873]
52. Fbxl22 ENSMUSG00000050503 191 0.804 0.804 - - - - - F-box and leucine-rich repeat protein 22 [Source:MGI Symbol;Acc:MGI:1921415]
53. Smarcd2 ENSMUSG00000078619 1081 0.804 0.804 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:MGI Symbol;Acc:MGI:1933621]
54. Ccbe1 ENSMUSG00000046318 722 0.804 0.804 - - - - - collagen and calcium binding EGF domains 1 [Source:MGI Symbol;Acc:MGI:2445053]
55. Cnn1 ENSMUSG00000001349 296 0.803 0.803 - - - - - calponin 1 [Source:MGI Symbol;Acc:MGI:104979]
56. Rab36 ENSMUSG00000020175 400 0.803 0.803 - - - - - RAB36, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1924127]
57. 4930513N10Rik ENSMUSG00000074136 212 0.803 0.803 - - - - - RIKEN cDNA 4930513N10 gene [Source:MGI Symbol;Acc:MGI:2443064]
58. Oxr1 ENSMUSG00000022307 1437 0.803 0.803 - - - - - oxidation resistance 1 [Source:MGI Symbol;Acc:MGI:2179326]
59. Cep19 ENSMUSG00000035790 440 0.802 0.802 - - - - - centrosomal protein 19 [Source:MGI Symbol;Acc:MGI:1914244]
60. Dse ENSMUSG00000039497 2297 0.802 0.802 - - - - - dermatan sulfate epimerase [Source:MGI Symbol;Acc:MGI:2443455]
61. Dhodh ENSMUSG00000031730 1335 0.802 0.802 - - - - - dihydroorotate dehydrogenase [Source:MGI Symbol;Acc:MGI:1928378]
62. Kctd6 ENSMUSG00000021752 327 0.802 0.802 - - - - - potassium channel tetramerisation domain containing 6 [Source:MGI Symbol;Acc:MGI:1918643]
63. Reps1 ENSMUSG00000019854 1546 0.801 0.801 - - - - - RalBP1 associated Eps domain containing protein [Source:MGI Symbol;Acc:MGI:1196373]
64. Phyh ENSMUSG00000026664 659 0.801 0.801 - - - - - phytanoyl-CoA hydroxylase [Source:MGI Symbol;Acc:MGI:891978]
65. Ppp1r12b ENSMUSG00000073557 766 0.8 0.800 - - - - - protein phosphatase 1, regulatory subunit 12B [Source:MGI Symbol;Acc:MGI:1916417]
66. Inpp1 ENSMUSG00000026102 176 0.8 0.800 - - - - - inositol polyphosphate-1-phosphatase [Source:MGI Symbol;Acc:MGI:104848]
67. Ext2 ENSMUSG00000027198 1680 0.8 0.800 - - - - - exostoses (multiple) 2 [Source:MGI Symbol;Acc:MGI:108050]
68. Arl8a ENSMUSG00000026426 1810 0.8 0.800 - - - - - ADP-ribosylation factor-like 8A [Source:MGI Symbol;Acc:MGI:1915974]
69. Ptx3 ENSMUSG00000027832 735 0.8 0.800 - - - - - pentraxin related gene [Source:MGI Symbol;Acc:MGI:104641]
70. Slc25a28 ENSMUSG00000040414 720 0.799 0.799 - - - - - solute carrier family 25, member 28 [Source:MGI Symbol;Acc:MGI:2180509]
71. Tmem248 ENSMUSG00000053094 2906 0.798 0.798 - - - - - transmembrane protein 248 [Source:MGI Symbol;Acc:MGI:1918917]
72. BC002163 ENSMUSG00000081824 561 0.798 0.798 - - - - - cDNA sequence BC002163 [Source:MGI Symbol;Acc:MGI:3612445]
73. Gm14849 ENSMUSG00000081807 337 0.798 0.798 - - - - - predicted gene 14849 [Source:MGI Symbol;Acc:MGI:3802125]
74. Caap1 ENSMUSG00000028578 1396 0.798 0.798 - - - - - caspase activity and apoptosis inhibitor 1 [Source:MGI Symbol;Acc:MGI:1915020]
75. Pter ENSMUSG00000026730 587 0.797 0.797 - - - - - phosphotriesterase related [Source:MGI Symbol;Acc:MGI:107372]
76. Vmn2r55 ENSMUSG00000091045 88 0.797 0.797 - - - - - vomeronasal 2, receptor 55 [Source:MGI Symbol;Acc:MGI:3757950]
77. Pdcd4 ENSMUSG00000024975 1336 0.797 0.797 - - - - - programmed cell death 4 [Source:MGI Symbol;Acc:MGI:107490]
78. Ankrd37 ENSMUSG00000050914 254 0.797 0.797 - - - - - ankyrin repeat domain 37 [Source:MGI Symbol;Acc:MGI:3603344]
79. St3gal2 ENSMUSG00000031749 2401 0.797 0.797 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:99427]
80. Cdc23 ENSMUSG00000024370 369 0.796 0.796 - - - - - CDC23 cell division cycle 23 [Source:MGI Symbol;Acc:MGI:1098815]
81. Ero1lb ENSMUSG00000057069 171 0.796 0.796 - - - - - ERO1-like beta (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914725]
82. Fhl3 ENSMUSG00000032643 178 0.796 0.796 - - - - - four and a half LIM domains 3 [Source:MGI Symbol;Acc:MGI:1341092]
83. 5430435G22Rik 5430435G22Rik 68 0.795 0.795 - - - - -
84. 9330159M07Rik ENSMUSG00000097177 192 0.795 0.795 - - - - - RIKEN cDNA 9330159M07 gene [Source:MGI Symbol;Acc:MGI:2442519]
85. Ccdc12 ENSMUSG00000019659 1494 0.794 0.794 - - - - - coiled-coil domain containing 12 [Source:MGI Symbol;Acc:MGI:1919904]
86. Cenpe ENSMUSG00000045328 4221 0.794 0.794 - - - - - centromere protein E [Source:MGI Symbol;Acc:MGI:1098230]
87. 1190002N15Rik ENSMUSG00000045414 1555 0.794 0.794 - - - - - RIKEN cDNA 1190002N15 gene [Source:MGI Symbol;Acc:MGI:1916111]
88. Mybl2 ENSMUSG00000017861 1195 0.794 0.794 - - - - - myeloblastosis oncogene-like 2 [Source:MGI Symbol;Acc:MGI:101785]
89. Fam63a 1080 0.793 0.793 - - - - - family with sequence similarity 63, member A, transcript variant X2
90. Gm2a ENSMUSG00000000594 385 0.793 0.793 - - - - - GM2 ganglioside activator protein [Source:MGI Symbol;Acc:MGI:95762]
91. Csrnp1 ENSMUSG00000032515 372 0.793 0.793 - - - - - cysteine-serine-rich nuclear protein 1 [Source:MGI Symbol;Acc:MGI:2387989]
92. Vstm4 ENSMUSG00000050666 343 0.792 0.792 - - - - - V-set and transmembrane domain containing 4 [Source:MGI Symbol;Acc:MGI:2444633]
93. Raph1 ENSMUSG00000026014 401 0.792 0.792 - - - - - Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 [Source:MGI Symbol;Acc:MGI:1924550]
94. Slc30a7 ENSMUSG00000054414 1863 0.792 0.792 - - - - - solute carrier family 30 (zinc transporter), member 7 [Source:MGI Symbol;Acc:MGI:1913750]
95. Dcaf13 ENSMUSG00000022300, ENSMUSG00000106903 2594 0.791 0.791 - - - - - DDB1 and CUL4 associated factor 13 [Source:MGI Symbol;Acc:MGI:2684929]
96. Dcaf11 ENSMUSG00000022214 663 0.791 0.791 - - - - - DDB1 and CUL4 associated factor 11 [Source:MGI Symbol;Acc:MGI:90168]
97. Emc4 ENSMUSG00000027131 1767 0.791 0.791 - - - - - ER membrane protein complex subunit 4 [Source:MGI Symbol;Acc:MGI:1915282]
98. Arfgap3 ENSMUSG00000054277 1293 0.791 0.791 - - - - - ADP-ribosylation factor GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:1913501]
99. Sh2b2 ENSMUSG00000005057 875 0.791 0.791 - - - - - SH2B adaptor protein 2 [Source:MGI Symbol;Acc:MGI:1345171]
100. Raver1 ENSMUSG00000010205 347 0.79 0.790 - - - - - ribonucleoprotein, PTB-binding 1 [Source:MGI Symbol;Acc:MGI:1919016]

There are 201 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA