Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for OTUB1

Gene Name Gene ID Reads Annotation
OTUB1 ENSG00000167770 22747 OTU deubiquitinase, ubiquitin aldehyde binding 1 [Source:HGNC Symbol;Acc:HGNC:23077]



Genes with expression patterns similar to OTUB1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. OTUB1 ENSG00000167770 22747 2 1.000 1.000 OTU deubiquitinase, ubiquitin aldehyde binding 1 [Source:HGNC Symbol;Acc:HGNC:23077]
2. UBA1 ENSG00000130985 20298 0.848 - 0.848 ubiquitin like modifier activating enzyme 1 [Source:HGNC Symbol;Acc:HGNC:12469]
3. HSP90AB1 ENSG00000096384 183977 0.838 - 0.838 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
4. DCTN1 ENSG00000204843 19815 0.836 - 0.836 dynactin subunit 1 [Source:HGNC Symbol;Acc:HGNC:2711]
5. AAAS ENSG00000094914 7598 0.83 - 0.830 aladin WD repeat nucleoporin [Source:HGNC Symbol;Acc:HGNC:13666]
6. PKM ENSG00000067225 58854 0.823 - 0.823 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
7. SAFB ENSG00000160633 7035 0.819 - 0.819 scaffold attachment factor B [Source:HGNC Symbol;Acc:HGNC:10520]
8. BANF1 ENSG00000175334 19847 0.818 - 0.818 barrier to autointegration factor 1 [Source:HGNC Symbol;Acc:HGNC:17397]
9. MLF2 ENSG00000089693 18042 0.8 - 0.800 myeloid leukemia factor 2 [Source:HGNC Symbol;Acc:HGNC:7126]
10. CDK16 ENSG00000102225 4372 0.799 - 0.799 cyclin dependent kinase 16 [Source:HGNC Symbol;Acc:HGNC:8749]
11. TRIM28 ENSG00000130726 33518 0.797 - 0.797 tripartite motif containing 28 [Source:HGNC Symbol;Acc:HGNC:16384]
12. CTXN1 ENSG00000178531 6094 0.793 - 0.793 cortexin 1 [Source:HGNC Symbol;Acc:HGNC:31108]
13. USP11 ENSG00000102226 8177 0.792 - 0.792 ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]
14. STRN4 ENSG00000090372 7212 0.792 - 0.792 striatin 4 [Source:HGNC Symbol;Acc:HGNC:15721]
15. TBCB ENSG00000105254 27421 0.789 - 0.789 tubulin folding cofactor B [Source:HGNC Symbol;Acc:HGNC:1989]
16. DNMT1 ENSG00000130816 23001 0.788 - 0.788 DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]
17. EEF2 ENSG00000167658 47680 0.788 - 0.788 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:3214]
18. SNRNP70 ENSG00000104852 14118 0.787 - 0.787 small nuclear ribonucleoprotein U1 subunit 70 [Source:HGNC Symbol;Acc:HGNC:11150]
19. ARHGDIA ENSG00000141522 3661 0.781 - 0.781 Rho GDP dissociation inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:678]
20. EIF5A ENSG00000132507 27570 0.781 - 0.781 eukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:HGNC:3300]
21. CFL1 ENSG00000172757 100783 0.779 - 0.779 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
22. PRKCSH ENSG00000130175 2117 0.779 - 0.779 protein kinase C substrate 80K-H [Source:HGNC Symbol;Acc:HGNC:9411]
23. SMARCA4 ENSG00000127616 21398 0.776 - 0.776 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
24. PSMC4 ENSG00000013275, ENSG00000281221 6978 0.775 - 0.775 proteasome 26S subunit, ATPase 4 [Source:HGNC Symbol;Acc:HGNC:9551]
25. SF1 ENSG00000168066 32785 0.773 - 0.773 splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:12950]
26. PFN1 ENSG00000108518 109652 0.773 - 0.773 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
27. ATP6V0C ENSG00000185883 26903 0.771 - 0.771 ATPase H+ transporting V0 subunit c [Source:HGNC Symbol;Acc:HGNC:855]
28. MARCKSL1 ENSG00000175130 73054 0.771 - 0.771 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
29. ATP5SL 25967 0.769 - 0.769 ATP5S like, transcript variant X1
30. PSME3 ENSG00000131467 10433 0.768 - 0.768 proteasome activator subunit 3 [Source:HGNC Symbol;Acc:HGNC:9570]
31. GIGYF1 ENSG00000146830 2356 0.766 - 0.766 GRB10 interacting GYF protein 1 [Source:HGNC Symbol;Acc:HGNC:9126]
32. RHBDD2 ENSG00000005486 6577 0.766 - 0.766 rhomboid domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23082]
33. H1FX ENSG00000184897 16213 0.761 - 0.761 H1 histone family member X [Source:HGNC Symbol;Acc:HGNC:4722]
34. USP5 ENSG00000111667 2579 0.761 - 0.761 ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
35. AURKB ENSG00000178999 25157 0.758 - 0.758 aurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]
36. CDC37 ENSG00000105401 6040 0.758 - 0.758 cell division cycle 37 [Source:HGNC Symbol;Acc:HGNC:1735]
37. SNRPA ENSG00000077312 4577 0.757 - 0.757 small nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:HGNC:11151]
38. BSG ENSG00000172270 6739 0.756 - 0.756 basigin (Ok blood group) [Source:HGNC Symbol;Acc:HGNC:1116]
39. PMF1 ENSG00000160783 12298 0.756 - 0.756 polyamine modulated factor 1 [Source:HGNC Symbol;Acc:HGNC:9112]
40. PPP2R1A ENSG00000105568 13029 0.755 - 0.755 protein phosphatase 2 scaffold subunit Aalpha [Source:HGNC Symbol;Acc:HGNC:9302]
41. ISYNA1 ENSG00000105655 4796 0.755 - 0.755 inositol-3-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:29821]
42. CPSF7 ENSG00000149532 16261 0.754 - 0.754 cleavage and polyadenylation specific factor 7 [Source:HGNC Symbol;Acc:HGNC:30098]
43. FKBP1A ENSG00000088832 16905 0.752 - 0.752 FK506 binding protein 1A [Source:HGNC Symbol;Acc:HGNC:3711]
44. TRAP1 ENSG00000126602 7214 0.751 - 0.751 TNF receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16264]
45. NELFA ENSG00000185049 4150 0.749 - 0.749 negative elongation factor complex member A [Source:HGNC Symbol;Acc:HGNC:12768]
46. USP22 ENSG00000124422 49599 0.748 - 0.748 ubiquitin specific peptidase 22 [Source:HGNC Symbol;Acc:HGNC:12621]
47. U2AF2 ENSG00000063244 19476 0.748 - 0.748 U2 small nuclear RNA auxiliary factor 2 [Source:HGNC Symbol;Acc:HGNC:23156]
48. PTMS ENSG00000159335 4419 0.747 - 0.747 parathymosin [Source:HGNC Symbol;Acc:HGNC:9629]
49. KHSRP ENSG00000088247 13538 0.745 - 0.745 KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:HGNC:6316]
50. FSCN1 ENSG00000075618 34169 0.739 - 0.739 fascin actin-bundling protein 1 [Source:HGNC Symbol;Acc:HGNC:11148]
51. PRAF2 ENSG00000243279 10957 0.737 - 0.737 PRA1 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:28911]
52. TAF6 ENSG00000106290 8475 0.737 - 0.737 TATA-box binding protein associated factor 6 [Source:HGNC Symbol;Acc:HGNC:11540]
53. ALG3 ENSG00000214160 8221 0.736 - 0.736 ALG3, alpha-1,3- mannosyltransferase [Source:HGNC Symbol;Acc:HGNC:23056]
54. ZYX ENSG00000159840, ENSG00000285443 6596 0.736 - 0.736 zyxin [Source:HGNC Symbol;Acc:HGNC:13200]
55. TUBA1B ENSG00000123416 396924 0.735 - 0.735 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
56. FTO ENSG00000140718 19943 0.735 - 0.735 FTO, alpha-ketoglutarate dependent dioxygenase [Source:HGNC Symbol;Acc:HGNC:24678]
57. SF3B3 ENSG00000189091 8156 0.735 - 0.735 splicing factor 3b subunit 3 [Source:HGNC Symbol;Acc:HGNC:10770]
58. PPME1 ENSG00000214517 4946 0.732 - 0.732 protein phosphatase methylesterase 1 [Source:HGNC Symbol;Acc:HGNC:30178]
59. UBE2C ENSG00000175063 19631 0.732 - 0.732 ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
60. DAP ENSG00000112977 7525 0.732 - 0.732 death associated protein [Source:HGNC Symbol;Acc:HGNC:2672]
61. CTDNEP1 ENSG00000175826 15483 0.731 - 0.731 CTD nuclear envelope phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:19085]
62. CAPNS1 ENSG00000126247 60832 0.731 - 0.731 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
63. GPS2 ENSG00000132522 22685 0.728 - 0.728 G protein pathway suppressor 2 [Source:HGNC Symbol;Acc:HGNC:4550]
64. SRRT ENSG00000087087 9730 0.728 - 0.728 serrate, RNA effector molecule [Source:HGNC Symbol;Acc:HGNC:24101]
65. POLR2E ENSG00000099817 7529 0.727 - 0.727 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
66. NDUFB11 ENSG00000147123 12020 0.726 - 0.726 NADH:ubiquinone oxidoreductase subunit B11 [Source:HGNC Symbol;Acc:HGNC:20372]
67. ERGIC3 ENSG00000125991 8782 0.725 - 0.725 ERGIC and golgi 3 [Source:HGNC Symbol;Acc:HGNC:15927]
68. CUTA ENSG00000112514, ENSG00000226492 17547 0.725 - 0.725 cutA divalent cation tolerance homolog [Source:HGNC Symbol;Acc:HGNC:21101]
69. MAF1 ENSG00000179632 4345 0.725 - 0.725 MAF1 homolog, negative regulator of RNA polymerase III [Source:HGNC Symbol;Acc:HGNC:24966]
70. POLR2J ENSG00000005075 6270 0.724 - 0.724 RNA polymerase II subunit J [Source:HGNC Symbol;Acc:HGNC:9197]
71. EIF6 ENSG00000242372 10457 0.723 - 0.723 eukaryotic translation initiation factor 6 [Source:HGNC Symbol;Acc:HGNC:6159]
72. SPSB4 ENSG00000175093 3126 0.721 - 0.721 splA/ryanodine receptor domain and SOCS box containing 4 [Source:HGNC Symbol;Acc:HGNC:30630]
73. JRK ENSG00000234616 3021 0.719 - 0.719 Jrk helix-turn-helix protein [Source:HGNC Symbol;Acc:HGNC:6199]
74. PRDX2 ENSG00000167815 5248 0.719 - 0.719 peroxiredoxin 2 [Source:HGNC Symbol;Acc:HGNC:9353]
75. DLGAP4 ENSG00000080845 6521 0.718 - 0.718 DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
76. SERF2 ENSG00000140264 104213 0.718 - 0.718 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
77. FOXRED2 ENSG00000100350 5176 0.718 - 0.718 FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
78. ENO1 ENSG00000074800 57728 0.718 - 0.718 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
79. ATP5B 30562 0.717 - 0.717 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
80. FAM213B 13531 0.717 - 0.717 family with sequence similarity 213 member B, transcript variant X4
81. PPDPF ENSG00000125534 12552 0.716 - 0.716 pancreatic progenitor cell differentiation and proliferation factor [Source:HGNC Symbol;Acc:HGNC:16142]
82. PACS2 ENSG00000179364 3440 0.715 - 0.715 phosphofurin acidic cluster sorting protein 2 [Source:HGNC Symbol;Acc:HGNC:23794]
83. MED24 ENSG00000008838 7251 0.715 - 0.715 mediator complex subunit 24 [Source:HGNC Symbol;Acc:HGNC:22963]
84. CS ENSG00000062485 8243 0.714 - 0.714 citrate synthase [Source:HGNC Symbol;Acc:HGNC:2422]
85. TAF10 ENSG00000166337 4917 0.714 - 0.714 TATA-box binding protein associated factor 10 [Source:HGNC Symbol;Acc:HGNC:11543]
86. ATP13A2 ENSG00000159363 3286 0.713 - 0.713 ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]
87. AP2M1 ENSG00000161203 7936 0.712 - 0.712 adaptor related protein complex 2 subunit mu 1 [Source:HGNC Symbol;Acc:HGNC:564]
88. GPS1 ENSG00000169727 2907 0.711 - 0.711 G protein pathway suppressor 1 [Source:HGNC Symbol;Acc:HGNC:4549]
89. GAK ENSG00000178950 4410 0.711 - 0.711 cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
90. G6PD ENSG00000160211 5383 0.71 - 0.710 glucose-6-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4057]
91. CALM3 ENSG00000160014 17997 0.708 - 0.708 calmodulin 3 [Source:HGNC Symbol;Acc:HGNC:1449]
92. CSK ENSG00000103653 5441 0.708 - 0.708 C-terminal Src kinase [Source:HGNC Symbol;Acc:HGNC:2444]
93. CDIP1 ENSG00000089486, ENSG00000274336 2346 0.708 - 0.708 cell death inducing p53 target 1 [Source:HGNC Symbol;Acc:HGNC:13234]
94. DBN1 ENSG00000113758 12842 0.708 - 0.708 drebrin 1 [Source:HGNC Symbol;Acc:HGNC:2695]
95. TNPO2 ENSG00000105576 7612 0.706 - 0.706 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
96. SF3B4 ENSG00000143368 11661 0.705 - 0.705 splicing factor 3b subunit 4 [Source:HGNC Symbol;Acc:HGNC:10771]
97. SLC25A1 ENSG00000100075 6981 0.704 - 0.704 solute carrier family 25 member 1 [Source:HGNC Symbol;Acc:HGNC:10979]
98. ACTN4 ENSG00000130402, ENSG00000282844 11089 0.703 - 0.703 actinin alpha 4 [Source:HGNC Symbol;Acc:HGNC:166]
99. DMWD ENSG00000185800 3745 0.703 - 0.703 DM1 locus, WD repeat containing [Source:HGNC Symbol;Acc:HGNC:2936]
100. NAPA ENSG00000105402 1100 0.703 - 0.703 NSF attachment protein alpha [Source:HGNC Symbol;Acc:HGNC:7641]

There are 4 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA