Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for OPTN

Gene Name Gene ID Reads Annotation
OPTN ENSGALG00000013738 1024 optineurin [Source:NCBI gene;Acc:374079]











Genes with expression patterns similar to OPTN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. OPTN ENSGALG00000013738 1024 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 optineurin [Source:NCBI gene;Acc:374079]
2. GPR126 GPR126 661 1.597 - - - - - - 0.801 - 0.796 -
3. PPAPDC2 PPAPDC2 1976 1.596 - - - - - - 0.829 0.767 - -
4. KLF4 ENSGALG00000026928 184 1.57 - - - - - - 0.743 - 0.827 - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
5. MEGF10 ENSGALG00000014699 248 1.567 - - - - - - 0.811 - 0.756 - multiple EGF like domains 10 [Source:HGNC Symbol;Acc:HGNC:29634]
6. CDCA2 ENSGALG00000045842 2236 1.47 - - - - - - 0.713 - 0.757 - cell division cycle associated 2, transcript variant X3
7. ACBD7 ENSGALG00000019663 2328 0.863 - - - - - - 0.863 - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
8. SNAP47 ENSGALG00000005412 1487 0.854 - - - - - - 0.854 - - - synaptosome associated protein 47 [Source:HGNC Symbol;Acc:HGNC:30669]
9. GANC ENSGALG00000009036 731 0.846 - - - - - - 0.846 - - - glucosidase alpha, neutral C [Source:NCBI gene;Acc:423232]
10. LOC419074 ENSGALG00000017336 1885 0.844 - - - - - - 0.844 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
11. TTC12 1384 0.844 - - - - - - 0.844 - - - tetratricopeptide repeat domain 12, transcript variant X4
12. LYRM1 ENSGALG00000002273 1523 0.84 - - - - - - 0.840 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
13. TIPARP ENSGALG00000010256 1825 0.839 - - - - - - 0.839 - - - TCDD inducible poly(ADP-ribose) polymerase [Source:HGNC Symbol;Acc:HGNC:23696]
14. ANAPC7 ENSGALG00000003826 5484 0.837 - - - - - - 0.837 - - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
15. PIBF1 ENSGALG00000016929 593 0.834 - - - - - - 0.834 - - - progesterone immunomodulatory binding factor 1 [Source:HGNC Symbol;Acc:HGNC:23352]
16. SERPINB6 ENSGALG00000012866 1582 0.827 - - - - - - 0.827 - - - serpin family B member 6 [Source:NCBI gene;Acc:420895]
17. LOC769139 ENSGALG00000026754 753 0.826 - - - - - - 0.826 - - - feather keratin 1-like, transcript variant X2
18. EMC8 ENSGALG00000005744 9422 0.826 - - - - - - 0.826 - - - ER membrane protein complex subunit 8
19. TMCC2 ENSGALG00000034281 3458 0.824 - - - - - - - - 0.824 - transmembrane and coiled-coil domain family 2 [Source:HGNC Symbol;Acc:HGNC:24239]
20. ZFYVE16 ENSGALG00000015576 287 0.82 - - - - - - 0.820 - - - zinc finger FYVE-type containing 16, transcript variant X3
21. NPTX2 ENSGALG00000003562 249 0.818 - - - - - - 0.818 - - - neuronal pentraxin 2 [Source:HGNC Symbol;Acc:HGNC:7953]
22. FRG1 ENSGALG00000013590 2590 0.817 - - - - - - 0.817 - - - FSHD region gene 1
23. MADD ENSGALG00000008181 2273 0.817 - - - - - - 0.817 - - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
24. TTC38 ENSGALG00000014551 1135 0.815 - - - - - - 0.815 - - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
25. ENSGALG00000023314 ENSGALG00000023314 6331 0.815 - - - - - - 0.815 - - -
26. ZBTB10 ENSGALG00000034376 3271 0.814 - - - - - - 0.814 - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
27. PLK4 ENSGALG00000010195 514 0.813 - - - - - - 0.813 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
28. DUSP10 ENSGALG00000009450 1041 0.812 - - - - - - 0.812 - - - dual specificity phosphatase 10 [Source:NCBI gene;Acc:421340]
29. SNRNP25 ENSGALG00000026559 2097 0.811 - - - - - - 0.811 - - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
30. TULP3 ENSGALG00000013424 2064 0.81 - - - - - - 0.810 - - - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
31. SMAD3 ENSGALG00000035701 161 0.809 - - - - - - 0.809 - - - SMAD family member 3 [Source:NCBI gene;Acc:395132]
32. FAM210A ENSGALG00000013887 1828 0.807 - - - - - - 0.807 - - - family with sequence similarity 210 member A [Source:NCBI gene;Acc:421045]
33. RAB22A ENSGALG00000007554 201 0.802 - - - - - - 0.802 - - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
34. GGT7 ENSGALG00000001062 476 0.802 - - - - - - 0.802 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
35. PGGT1B ENSGALG00000008197 1881 0.8 - - - - - - 0.800 - - - protein geranylgeranyltransferase type I subunit beta [Source:HGNC Symbol;Acc:HGNC:8895]
36. RPE65 ENSGALG00000011259 51 0.799 - - - - - - 0.799 - - - RPE65, retinoid isomerohydrolase [Source:NCBI gene;Acc:395700]
37. IQCH ENSGALG00000007909 128 0.798 - - - - - - 0.798 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
38. PFN2 313 0.797 - - - - - - - - 0.797 - profilin 2, transcript variant X2
39. MYF5 ENSGALG00000028091 1965 0.797 - - - - - - 0.797 - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
40. RNF170 ENSGALG00000015386 296 0.797 - - - - - - 0.797 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
41. KRTCAP3 ENSGALG00000016510 453 0.797 - - - - - - - - 0.797 - keratinocyte associated protein 3 [Source:HGNC Symbol;Acc:HGNC:28943]
42. WSCD1 ENSGALG00000005886 539 0.796 - - - - - - 0.796 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
43. PVALB1 PVALB1 267 0.795 - - - - - - - - 0.795 -
44. LOC112532477 ENSGALG00000027520 40 0.794 - - - - - - 0.794 - - - fibrinogen-like protein 1-like protein
45. ENKUR ENSGALG00000007680 637 0.794 - - - - - - 0.794 - - - enkurin, TRPC channel interacting protein [Source:HGNC Symbol;Acc:HGNC:28388]
46. PDLIM1 ENSGALG00000005422 3385 0.793 - - - - - - 0.793 - - - PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
47. PTPN21 ENSGALG00000010616 129 0.793 - - - - - - 0.793 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
48. MYL1 ENSGALG00000002907 1300 0.791 - - - - - - 0.791 - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
49. DBI ENSGALG00000012112 6910 0.791 - - - - - - 0.791 - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
50. GRAMD1C ENSGALG00000035629 2494 0.79 - - - - - - 0.790 - - - GRAM domain containing 1C [Source:HGNC Symbol;Acc:HGNC:25252]
51. HSPA13 ENSGALG00000019201 712 0.787 - - - - - - 0.787 - - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
52. EFCAB7 ENSGALG00000010998 13 0.786 - - - - - - 0.786 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
53. DEGS1 ENSGALG00000009330 3599 0.786 - - - - - - 0.786 - - - delta 4-desaturase, sphingolipid 1 [Source:NCBI gene;Acc:421327]
54. CAT-1 CAT-1 115 0.786 - - - - - - 0.786 - - -
55. TMEM65 ENSGALG00000037371 776 0.785 - - - - - - 0.785 - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
56. LGI2 ENSGALG00000043283 433 0.784 - - - - - - 0.784 - - - leucine rich repeat LGI family member 2 [Source:NCBI gene;Acc:422809]
57. ARHGAP12 ENSGALG00000007254 479 0.783 - - - - - - 0.783 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
58. GTF2A2 ENSGALG00000003793 5957 0.783 - - - - - - 0.783 - - - general transcription factor IIA subunit 2 [Source:NCBI gene;Acc:770910]
59. SLC39A6 ENSGALG00000013209 1754 0.783 - - - - - - 0.783 - - - solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
60. KIAA1244 KIAA1244 62 0.783 - - - - - - 0.783 - - -
61. MRPL16 ENSGALG00000029419 8033 0.782 - - - - - - - 0.782 - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
62. NDST2 ENSGALG00000005107 4224 0.782 - - - - - - 0.782 - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
63. TAP1 ENSGALG00000035075 54 0.781 - - - - - - 0.781 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
64. HN1L HN1L 247 0.781 - - - - - - 0.781 - - -
65. ASH1L ENSGALG00000014638 803 0.781 - - - - - - 0.781 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
66. PANX1 ENSGALG00000039751 70 0.78 - - - - - - 0.780 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
67. MBL2 ENSGALG00000002507 17 0.78 - - - - - - 0.780 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
68. TRIM35 ENSGALG00000016595 357 0.78 - - - - - - - - 0.780 - tripartite motif containing 35 [Source:HGNC Symbol;Acc:HGNC:16285]
69. CHST9 ENSGALG00000019489 21 0.78 - - - - - - 0.780 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
70. CBLN1 ENSGALG00000042664 15 0.78 - - - - - - 0.780 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
71. MAP3K19 ENSGALG00000028457 17 0.78 - - - - - - 0.780 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
72. FAM46C 13 0.78 - - - - - - 0.780 - - - family with sequence similarity 46 member C
73. SLC16A14 ENSGALG00000002897 157 0.779 - - - - - - 0.779 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
74. C2CD5 ENSGALG00000013210 3060 0.779 - - - - - - - - 0.779 - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
75. SAP130 ENSGALG00000002070 9814 0.779 - - - - - - 0.779 - - - Sin3A associated protein 130 [Source:NCBI gene;Acc:424756]
76. PURG ENSGALG00000027562 128 0.779 - - - - - - - - 0.779 - purine rich element binding protein G [Source:HGNC Symbol;Acc:HGNC:17930]
77. ACOX1 ENSGALG00000002159 2953 0.778 - - - - - - 0.778 - - - acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
78. FAM92A1 FAM92A1 511 0.778 - - - - - - - - 0.778 -
79. ENSGALG00000026941 ENSGALG00000026941 653 0.777 - - - - - - 0.777 - - -
80. DNAJB13 ENSGALG00000017317 12 0.776 - - - - - 0.776 - - - - DnaJ heat shock protein family (Hsp40) member B13 [Source:HGNC Symbol;Acc:HGNC:30718]
81. LEF-1 LEF-1 411 0.776 - - - - - - 0.776 - - -
82. TRAPPC12 ENSGALG00000016387 2593 0.775 - - - - - - 0.775 - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
83. MCPH1 ENSGALG00000016332 2097 0.775 - - - - - - 0.775 - - - microcephalin 1 [Source:NCBI gene;Acc:100125976]
84. SCTR ENSGALG00000012106 49 0.774 - - - - - - 0.774 - - - secretin receptor [Source:NCBI gene;Acc:770943]
85. C10ORF58 C10ORF58 5045 0.774 - - - - - - 0.774 - - -
86. FOXRED1 ENSGALG00000046347 4176 0.774 - - - - - - 0.774 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
87. AFG3L2 ENSGALG00000013853 1138 0.774 - - - - - - 0.774 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
88. LOC415664 ENSGALG00000001791 2688 0.773 - - - - - - 0.773 - - - uncharacterized oxidoreductase-like, transcript variant X1
89. SMTNL2 ENSGALG00000006069 827 0.773 - - - - - - - - 0.773 - smoothelin like 2 [Source:HGNC Symbol;Acc:HGNC:24764]
90. PLEKHS1 ENSGALG00000020679 161 0.773 - - - - - - 0.773 - - - pleckstrin homology domain containing S1 [Source:HGNC Symbol;Acc:HGNC:26285]
91. ADAP2 ENSGALG00000003319 134 0.773 - - - - - - 0.773 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
92. WDR35 157 0.773 - - - - - - 0.773 - - - WD repeat domain 35, transcript variant X1
93. CYTH1 ENSGALG00000007093 2453 0.772 - - - - - - 0.772 - - - cytohesin 1 [Source:NCBI gene;Acc:422085]
94. SLC2A9 ENSGALG00000014971 751 0.772 - - - - - - 0.772 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
95. ERI1 ENSGALG00000011448 3236 0.771 - - - - - - - 0.771 - - exoribonuclease 1 [Source:NCBI gene;Acc:422629]
96. MTOR ENSGALG00000003339 328 0.771 - - - - - - 0.771 - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
97. GPR27 ENSGALG00000027091 8111 0.771 - - - - - - 0.771 - - - G protein-coupled receptor 27
98. PKIB ENSGALG00000027036 1663 0.77 - - - - - - 0.770 - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:NCBI gene;Acc:769402]
99. C12H3ORF19 C12H3ORF19 1278 0.769 - - - - - - 0.769 - - -
100. SYT8 ENSGALG00000006602 369 0.769 - - - - - - 0.769 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]

There are 205 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA