Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for OPN4-1

Gene Name Gene ID Reads Annotation
OPN4-1 ENSGALG00000041662 10 photopigment melanopsin-like [Source:NCBI gene;Acc:395334]











Genes with expression patterns similar to OPN4-1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. OPN4-1 ENSGALG00000041662 10 3 - - - 1.000 - - - 1.000 - 1.000 photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
2. SEC14L5 ENSGALG00000045758 25 1.881 - - - 0.930 - - - 0.951 - - SEC14 like lipid binding 5 [Source:HGNC Symbol;Acc:HGNC:29032]
3. CXorf36 ENSGALG00000016215 108 1.638 - - - 0.892 - - - 0.746 - - chromosome X open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:25866]
4. IL18R1 ENSGALG00000040621 12 1.573 - - - 0.815 - - - - - 0.758 interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
5. PDCL2 ENSGALG00000013783 9 1 - - - - - - - - - 1.000 phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
6. GMNC ENSGALG00000026907 6 1 - - - - - - - 1.000 - - geminin coiled-coil domain containing [Source:HGNC Symbol;Acc:HGNC:40049]
7. FGF16 ENSGALG00000007806 8 1 - - - - - - - - - 1.000 fibroblast growth factor 16 [Source:NCBI gene;Acc:422330]
8. GDA ENSGALG00000015141 21 1 - - - - - - - - - 1.000 guanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]
9. SGCG ENSGALG00000017122 13 1 - - - - - - - 1.000 - - sarcoglycan gamma [Source:HGNC Symbol;Acc:HGNC:10809]
10. IL16 ENSGALG00000006388 3 1 - - - - - - - - - 1.000 interleukin 16 [Source:NCBI gene;Acc:374270]
11. KCNA4 ENSGALG00000012142 6 1 - - - - - - - - - 1.000 potassium voltage-gated channel subfamily A member 4 [Source:NCBI gene;Acc:395721]
12. YPEL2 ENSGALG00000028801 1 1 - - - - - - - 1.000 - - yippee like 2 [Source:NCBI gene;Acc:417632]
13. ENSGALG00000005578 ENSGALG00000005578 16 1 - - - - - - - 1.000 - -
14. SHISA2 ENSGALG00000043035 1 1 - - - - - - - 1.000 - - shisa family member 2 [Source:NCBI gene;Acc:395162]
15. IRF8 ENSGALG00000005757 5 1 - - - - - - - 1.000 - - interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
16. TBC1D2B ENSGALG00000003322 54 1 - - - - - - - 1.000 - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
17. ENSGALG00000006897 ENSGALG00000006897 13 1 - - - - - - - 1.000 - -
18. LNP1 ENSGALG00000015287 14 1 - - - - - - - 1.000 - - leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
19. TRPM6 3 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
20. SLC25A12 ENSGALG00000009545 36 1 - - - - - - - 1.000 - - solute carrier family 25 member 12 [Source:HGNC Symbol;Acc:HGNC:10982]
21. ENSGALG00000000443 ENSGALG00000000443 2 1 - - - - - - - - - 1.000
22. ENSGALG00000026501 ENSGALG00000026501 39 1 - - - - - - - - - 1.000
23. AGBL2 ENSGALG00000029618 8 1 - - - - - - - 1.000 - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
24. HOXA1 ENSGALG00000028095 137 1 - - - - - - - - - 1.000 homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
25. NPDC1 ENSGALG00000042635 12 1 - - - - - - - 1.000 - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
26. ENSGALG00000024397 ENSGALG00000024397 2 1 - - - - - - - 1.000 - -
27. ABCB1LB ABCB1LB 4 1 - - - - - - - - - 1.000
28. ENSGALG00000027597 ENSGALG00000027597 13 1 - - - - - - - - - 1.000
29. CECR2 ENSGALG00000013034 12 1 - - - - - - - - - 1.000 CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
30. PROK1 ENSGALG00000040082 34 1 - - - - - - - 1.000 - - prokineticin 1 [Source:HGNC Symbol;Acc:HGNC:18454]
31. ADORA1 ENSGALG00000000168 43 1 - - - - - - - 1.000 - - adenosine A1 receptor [Source:NCBI gene;Acc:374212]
32. AQP11 ENSGALG00000031734 4 1 - - - - - - - 1.000 - - aquaporin 11 [Source:HGNC Symbol;Acc:HGNC:19940]
33. ENSGALG00000023305 ENSGALG00000023305 168 1 - - - - - - - 1.000 - -
34. LRRC47 7 1 - - - - - - - - - 1.000 leucine rich repeat containing 47
35. SCUBE2 ENSGALG00000032161 63 1 - - - - - - - 1.000 - - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
36. CD40 ENSGALG00000007015 7 1 - - - - - - - - - 1.000 CD40 molecule [Source:NCBI gene;Acc:395385]
37. UPK3A ENSGALG00000014227 7 1 - - - - - - - - - 1.000 uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
38. RAB3GAP2 ENSGALG00000009503 36 1 - - - - - - - 1.000 - - RAB3 GTPase activating non-catalytic protein subunit 2 [Source:NCBI gene;Acc:421343]
39. VPS37C ENSGALG00000038541 169 1 - - - - - - - 1.000 - - VPS37C, ESCRT-I subunit [Source:NCBI gene;Acc:423023]
40. LOC422926 ENSGALG00000027090 16 1 - - - - - - - 1.000 - - uncharacterized LOC422926
41. ENSGALG00000016601 ENSGALG00000016601 16 1 - - - - - - - 1.000 - -
42. RAP2A ENSGALG00000016889 26 1 - - - - - - - - - 1.000 RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
43. ISM2 ENSGALG00000010468 1 1 - - - - - - - - - 1.000 isthmin 2, transcript variant X2
44. TMC3 ENSGALG00000006376 12 1 - - - - - - - - - 1.000 transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
45. DDO ENSGALG00000015057 25 1 - - - - - - - - - 1.000 D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
46. CDH12 ENSGALG00000012941 223 1 - - - - - - - 1.000 - - cadherin 12, transcript variant X8
47. VTG1 ENSGALG00000039354 17 1 - - - - - - - - - 1.000 vitellogenin 1 [Source:NCBI gene;Acc:424547]
48. TRPM8 ENSGALG00000004116 2 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
49. C18H17ORF67 ENSGALG00000024428 10 1 - - - - - - - - - 1.000 chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
50. SNORD61 SNORD61 12 1 - - - - - - - - - 1.000
51. Mar-03 Mar-03 45 1 - - - - - - - 1.000 - -
52. ENSGALG00000028196 ENSGALG00000028196 8 1 - - - - - - - 1.000 - -
53. TIAM1 ENSGALG00000015842 17 1 - - - - - - - 1.000 - - T cell lymphoma invasion and metastasis 1 [Source:HGNC Symbol;Acc:HGNC:11805]
54. TROVE2 ENSGALG00000002504 14 1 - - - - - - - 1.000 - - TROVE domain family member 2 [Source:HGNC Symbol;Acc:HGNC:11313]
55. CD1A1 CD1A1 12 1 - - - - - - - 1.000 - -
56. ENSGALG00000025879 ENSGALG00000025879 3 1 - - - - - - - - - 1.000
57. CLVS2 ENSGALG00000014853 22 1 - - - - - - - 1.000 - - clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
58. ENSGALG00000004904 ENSGALG00000004904 237 1 - - - - - - - 1.000 - -
59. CLDN15 ENSGALG00000038964 21 1 - - - - - - - - - 1.000 claudin 15, transcript variant X4
60. ENSGALG00000024381 ENSGALG00000024381 9 1 - - - - - - - - - 1.000
61. ATP12A ENSGALG00000006469 7 1 - - - - - - - 1.000 - - ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene;Acc:419743]
62. CYTH4 ENSGALG00000012454 12 1 - - - - - - - 1.000 - - cytohesin 4 [Source:NCBI gene;Acc:418043]
63. CALML3 ENSGALG00000008424 88 1 - - - - - - - - - 1.000 calmodulin like 3 [Source:NCBI gene;Acc:416692]
64. INTS3 8 1 - - - - - - - 1.000 - - integrator complex subunit 3, transcript variant X2
65. TINAG ENSGALG00000016300 5 1 - - - - - - - 1.000 - - tubulointerstitial nephritis antigen [Source:NCBI gene;Acc:421888]
66. PPP1R16B ENSGALG00000003568 25 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 16B [Source:NCBI gene;Acc:419170]
67. LOC420992 ENSGALG00000013430 126 1 - - - - - - - 1.000 - - LOC420992, transcript variant X6
68. CAMK1 ENSGALG00000029912 6 1 - - - - - - - - - 1.000 calcium/calmodulin dependent protein kinase I [Source:HGNC Symbol;Acc:HGNC:1459]
69. ENSGALG00000027473 ENSGALG00000027473 0 1 - - - - - - - 1.000 - -
70. NUDT3 ENSGALG00000002830 7 1 - - - - - - - 1.000 - - nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
71. ENPP3 ENSGALG00000037587 25 1 - - - - - - - - - 1.000 ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
72. SLC24A5 ENSGALG00000004885 8 1 - - - - - - - 1.000 - - solute carrier family 24 member 5 [Source:NCBI gene;Acc:415431]
73. SV2C ENSGALG00000014967 7 1 - - - - - - - 1.000 - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
74. FOXN1 ENSGALG00000043868 3 1 - - - - - - - 1.000 - - forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]
75. USP49 ENSGALG00000003461 10 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 49 [Source:HGNC Symbol;Acc:HGNC:20078]
76. LRRC43 LRRC43 16 1 - - - - - - - 1.000 - -
77. ENSGALG00000027018 ENSGALG00000027018 12 0.996 - - - - - - - 0.996 - -
78. ATXN3 ENSGALG00000010766 48 0.996 - - - - - - - 0.996 - - ataxin 3 [Source:NCBI gene;Acc:378424]
79. DCHS1 ENSGALG00000017334 12 0.992 - - - - - - - - - 0.992 dachsous cadherin-related 1, transcript variant X1
80. NR3C1 ENSGALG00000032992 4 0.984 - - - - - - - 0.984 - - nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
81. PIGH ENSGALG00000009510 13 0.984 - - - - - - - 0.984 - - phosphatidylinositol glycan anchor biosynthesis class H [Source:NCBI gene;Acc:423271]
82. ENSGALG00000010272 ENSGALG00000010272 19 0.984 - - - - - - - 0.984 - -
83. ENSGALG00000010883 ENSGALG00000010883 10 0.984 - - - - - - - 0.984 - -
84. ACOT2L ENSGALG00000023243 3 0.984 - - - - - - - 0.984 - - acyl-coenzyme A thioesterase 2, mitochondrial-like
85. PKN2 ENSGALG00000006237 37 0.984 - - - - - - - 0.984 - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
86. MFN2 ENSGALG00000004523 10 0.979 - - - - - - - - - 0.979 mitofusin 2 [Source:HGNC Symbol;Acc:HGNC:16877]
87. WNT6 ENSGALG00000011358 1886 0.974 - - - - - - - - - 0.974 Wnt family member 6 [Source:NCBI gene;Acc:395235]
88. DDX43 ENSGALG00000015928 6 0.954 - - - - - - - 0.954 - - DEAD-box helicase 43
89. PPP1R26 ENSGALG00000002489 45 0.951 - - - - - - - 0.951 - - protein phosphatase 1 regulatory subunit 26 [Source:HGNC Symbol;Acc:HGNC:29089]
90. SRGAP2 ENSGALG00000000816 97 0.942 - - - - - - - 0.942 - - SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
91. C15orf26 C15orf26 21 0.935 - - - - - - - 0.935 - -
92. HDAC9 ENSGALG00000010854 49 0.935 - - - - - - - 0.935 - - histone deacetylase 9 [Source:NCBI gene;Acc:420599]
93. SDR42E2 ENSGALG00000006964 57 0.934 - - - - - - - - - 0.934 short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
94. FMO3 ENSGALG00000040573 26 0.932 - - - 0.932 - - - - - - flavin containing monooxygenase 3 [Source:NCBI gene;Acc:395267]
95. PDE6C ENSGALG00000006626 6 0.932 - - - 0.932 - - - - - - phosphodiesterase 6C [Source:NCBI gene;Acc:395834]
96. ENSGALG00000029114 ENSGALG00000029114 4 0.932 - - - 0.932 - - - - - -
97. IPCEF1 ENSGALG00000013625 3 0.932 - - - 0.932 - - - - - - interaction protein for cytohesin exchange factors 1, transcript variant X3
98. DHX58 ENSGALG00000023821 15 0.932 - - - 0.932 - - - - - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
99. GPX2 ENSGALG00000042031 4 0.932 - - - 0.932 - - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100857454]
100. CPB2 ENSGALG00000016985 3 0.932 - - - 0.932 - - - - - - carboxypeptidase B2 [Source:HGNC Symbol;Acc:HGNC:2300]

There are 110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA