Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for OPN3

Gene Name Gene ID Reads Annotation
OPN3 ENSGALG00000010762 1 opsin 3 [Source:HGNC Symbol;Acc:HGNC:14007]











Genes with expression patterns similar to OPN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. OPN3 ENSGALG00000010762 1 2 - - - 1.000 1.000 - - - - - opsin 3 [Source:HGNC Symbol;Acc:HGNC:14007]
2. ILDR2 ENSGALG00000015458 16 1 - - - - 1.000 - - - - - immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
3. POU6F2 ENSGALG00000031713 0 1 - - - 1.000 - - - - - - POU class 6 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:21694]
4. MFSD8 ENSGALG00000010199 11 1 - - - 1.000 - - - - - - major facilitator superfamily domain containing 8 [Source:HGNC Symbol;Acc:HGNC:28486]
5. NR1D1 ENSGALG00000001035 3 1 - - - 1.000 - - - - - - nuclear receptor subfamily 1, group D, member 1, transcript variant X2
6. ENSGALG00000023094 ENSGALG00000023094 15 1 - - - - 1.000 - - - - -
7. ST6GAL2 ENSGALG00000016803 24 1 - - - 1.000 - - - - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
8. WNT9A ENSGALG00000005401 7 1 - - - 1.000 - - - - - - Wnt family member 9A [Source:NCBI gene;Acc:395829]
9. CLDN12 ENSGALG00000009038 16 1 - - - - 1.000 - - - - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
10. SRPK3 SRPK3 2 1 - - - 1.000 - - - - - -
11. GAL12 GAL12 2 1 - - - 1.000 - - - - - -
12. ADAMTS5 ENSGALG00000015795 6 1 - - - 1.000 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 5 [Source:HGNC Symbol;Acc:HGNC:221]
13. CASP10 ENSGALG00000046494 2 1 - - - 1.000 - - - - - - caspase 10 [Source:HGNC Symbol;Acc:HGNC:1500]
14. WDR41 ENSGALG00000004350 16 1 - - - - 1.000 - - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
15. TXK ENSGALG00000014127 6 1 - - - 1.000 - - - - - - TXK tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:12434]
16. ENSGALG00000015966 ENSGALG00000015966 4 1 - - - - 1.000 - - - - -
17. ENSGALG00000023305 ENSGALG00000023305 168 1 - - - - 1.000 - - - - -
18. THSD7B ENSGALG00000012362 8 1 - - - - 1.000 - - - - - thrombospondin type 1 domain containing 7B [Source:HGNC Symbol;Acc:HGNC:29348]
19. ENSGALG00000013985 ENSGALG00000013985 11 1 - - - 1.000 - - - - - -
20. WDR64 ENSGALG00000010760 1 1 - - - 1.000 - - - - - - WD repeat domain 64 [Source:HGNC Symbol;Acc:HGNC:26570]
21. ACD ENSGALG00000044706 6 1 - - - 1.000 - - - - - - ACD, shelterin complex subunit and telomerase recruitment factor, transcript variant X4
22. NEK5 ENSGALG00000017023 1 1 - - - 1.000 - - - - - - NIMA related kinase 5 [Source:HGNC Symbol;Acc:HGNC:7748]
23. TDRD15 ENSGALG00000016492 2 1 - - - 1.000 - - - - - - tudor domain containing 15 [Source:HGNC Symbol;Acc:HGNC:45037]
24. PACSIN1 ENSGALG00000002802 6 1 - - - 1.000 - - - - - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
25. FLVCR1 ENSGALG00000009807 21 1 - - - 1.000 - - - - - - feline leukemia virus subgroup C cellular receptor 1 [Source:HGNC Symbol;Acc:HGNC:24682]
26. TTC16 0 1 - - - 1.000 - - - - - - tetratricopeptide repeat domain 16, transcript variant X2
27. ZAN ZAN 2 1 - - - 1.000 - - - - - -
28. gga-mir-22 ENSGALG00000024507 2 1 - - - 1.000 - - - - - - gga-mir-22 [Source:miRBase;Acc:MI0006982]
29. LNX1 ENSGALG00000013940 2 1 - - - 1.000 - - - - - - ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
30. HINFP ENSGALG00000006806 15 1 - - - 1.000 - - - - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
31. C20orf96 C20orf96 10 1 - - - 1.000 - - - - - -
32. SCRIB ENSGALG00000032790 4 1 - - - - 1.000 - - - - - scribbled planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:30377]
33. GMEB1 ENSGALG00000038488 158 1 - - - 1.000 - - - - - - glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370]
34. SNX22 34 1 - - - 1.000 - - - - - - sorting nexin 22
35. MAML3 ENSGALG00000009809 2 1 - - - 1.000 - - - - - - mastermind like transcriptional coactivator 3 [Source:HGNC Symbol;Acc:HGNC:16272]
36. XDH ENSGALG00000008701 10 1 - - - 1.000 - - - - - - xanthine dehydrogenase [Source:NCBI gene;Acc:396025]
37. FAM173B ENSGALG00000013043 4 1 - - - - 1.000 - - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
38. ARL6 ENSGALG00000019215 11 1 - - - 1.000 - - - - - - ADP ribosylation factor like GTPase 6 [Source:NCBI gene;Acc:418433]
39. 7SK_1 7SK_1 437 1 - - - 1.000 - - - - - -
40. TDRD5 ENSGALG00000033634 40 1 - - - 1.000 - - - - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
41. FASTK ENSGALG00000033058 21 1 - - - - 1.000 - - - - - Fas activated serine/threonine kinase
42. ENSGALG00000020380 ENSGALG00000020380 31 1 - - - 1.000 - - - - - -
43. ENSGALG00000016141 ENSGALG00000016141 10 1 - - - - 1.000 - - - - -
44. TFAP4 ENSGALG00000027823 12 1 - - - 1.000 - - - - - - transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]
45. CRK ENSGALG00000002656 15 1 - - - 1.000 - - - - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
46. KIAA0247 KIAA0247 10 0.971 - - - - 0.971 - - - - -
47. NOS2 ENSGALG00000038096 7 0.946 - - - 0.946 - - - - - - nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
48. NTRK1 ENSGALG00000019019 17 0.934 - - - - 0.934 - - - - - neurotrophic receptor tyrosine kinase 1 [Source:NCBI gene;Acc:396337]
49. TMEM161B ENSGALG00000010896 36 0.914 - - - - 0.914 - - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
50. MSANTD1 ENSGALG00000015628 154 0.895 - - - - 0.895 - - - - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
51. FMN2 ENSGALG00000031427 77 0.895 - - - - 0.895 - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
52. R3HDML ENSGALG00000046204 145 0.851 - - - - 0.851 - - - - - R3H domain containing like [Source:HGNC Symbol;Acc:HGNC:16249]
53. ENSGALG00000026592 ENSGALG00000026592 4331 0.85 - - - 0.850 - - - - - -
54. PSEN1 ENSGALG00000009320 15 0.847 - - - - 0.847 - - - - - presenilin 1 [Source:NCBI gene;Acc:373977]
55. LPHN3 LPHN3 41 0.834 - - - - 0.834 - - - - -
56. INTS3 8 0.83 - - - - 0.830 - - - - - integrator complex subunit 3, transcript variant X2
57. IGFBP2 ENSGALG00000011469 26 0.823 - - - 0.823 - - - - - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
58. SERINC3 ENSGALG00000004220 33 0.823 - - - 0.823 - - - - - - serine incorporator 3 [Source:NCBI gene;Acc:419196]
59. ENSGALG00000026668 ENSGALG00000026668 34 0.823 - - - 0.823 - - - - - -
60. PPP1R9A 4 0.823 - - - 0.823 - - - - - - protein phosphatase 1 regulatory subunit 9A, transcript variant X6
61. FAM190B FAM190B 165 0.805 - - - - 0.805 - - - - -
62. CCDC125 ENSGALG00000015572 51 0.804 - - - - 0.804 - - - - - coiled-coil domain containing 125 [Source:HGNC Symbol;Acc:HGNC:28924]
63. TM6SF1 ENSGALG00000006027 20 0.804 - - - 0.804 - - - - - - transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
64. HHIPL2 ENSGALG00000045729 9 0.804 - - - 0.804 - - - - - - HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
65. HPRTL ENSGALG00000005361 31 0.796 - - - - 0.796 - - - - - hypoxanthine-guanine phosphoribosyltransferase-like, transcript variant X1
66. TIMP2 ENSGALG00000027070 33 0.794 - - - - 0.794 - - - - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
67. TAS1R1 ENSGALG00000046030 8 0.792 - - - - 0.792 - - - - - taste 1 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14448]
68. PTPRF ENSGALG00000010053 27 0.783 - - - - 0.783 - - - - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
69. MRC2 ENSGALG00000000461 48 0.779 - - - - 0.779 - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
70. LRAT ENSGALG00000009276 220 0.773 - - - - 0.773 - - - - - lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685]
71. SERPINB10 ENSGALG00000019552 1 0.747 - - - 0.747 - - - - - - serpin family B member 10 [Source:HGNC Symbol;Acc:HGNC:8942]
72. ENSGALG00000003885 ENSGALG00000003885 5 0.746 - - - - 0.746 - - - - -
73. UVRAG ENSGALG00000000845 40 0.746 - - - - 0.746 - - - - - UV radiation resistance associated [Source:NCBI gene;Acc:419091]
74. DNAI2 ENSGALG00000004495 45 0.745 - - - - 0.745 - - - - - dynein axonemal intermediate chain 2
75. LYZ ENSGALG00000009963 28 0.736 - - - - 0.736 - - - - - lysozyme (renal amyloidosis) [Source:NCBI gene;Acc:396218]
76. KCNC1 ENSGALG00000006220 15 0.726 - - - - 0.726 - - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
77. ENSGALG00000024381 ENSGALG00000024381 9 0.725 - - - 0.725 - - - - - -
78. LRRN1 ENSGALG00000035099 684 0.724 - - - - 0.724 - - - - - leucine rich repeat neuronal 1 [Source:NCBI gene;Acc:771599]
79. PIGV ENSGALG00000039883 32 0.722 - - - - 0.722 - - - - - phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
80. CAST ENSGALG00000014682 900 0.719 - - - - 0.719 - - - - - calpastatin [Source:NCBI gene;Acc:427121]
81. CRHR1 ENSGALG00000000371 94 0.719 - - - - 0.719 - - - - - corticotropin releasing hormone receptor 1 [Source:NCBI gene;Acc:374218]
82. ENSGALG00000021157 ENSGALG00000021157 5 0.718 - - - - 0.718 - - - - -
83. GMNC ENSGALG00000026907 6 0.718 - - - - 0.718 - - - - - geminin coiled-coil domain containing [Source:HGNC Symbol;Acc:HGNC:40049]
84. INSRR ENSGALG00000013253 54 0.718 - - - - 0.718 - - - - - insulin receptor related receptor [Source:HGNC Symbol;Acc:HGNC:6093]
85. MYH1D ENSGALG00000027323 365 0.711 - - - - 0.711 - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
86. TRMT13 ENSGALG00000005290 95 0.708 - - - - 0.708 - - - - - tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA