Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for OGFOD1

Gene Name Gene ID Reads Annotation
OGFOD1 6926 2-oxoglutarate and iron dependent oxygenase domain containing 1











Genes with expression patterns similar to OGFOD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. OGFOD1 6926 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 2-oxoglutarate and iron dependent oxygenase domain containing 1
2. UTP3 ENSGALG00000011553 8814 1.78 - - - - - - 0.918 0.862 - - UTP3, small subunit processome component homolog (S. cerevisiae)
3. RBM12B ENSGALG00000035129 4314 1.755 - - - - - - 0.966 0.789 - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
4. XRN1 ENSGALG00000002706 4014 1.737 - - - - - - 0.941 0.796 - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
5. SIRT1 ENSGALG00000002761 9028 1.67 - - - - - - 0.952 0.718 - - sirtuin 1 [Source:NCBI gene;Acc:423646]
6. COPE ENSGALG00000003153 19444 1.669 - - - - - - 0.930 0.739 - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
7. MCM4 ENSGALG00000012915 13151 1.66 - - - - - - 0.777 0.883 - - minichromosome maintenance complex component 4
8. UPF1 ENSGALG00000003220 9496 1.652 - - - - - - 0.914 0.738 - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
9. CREPT CREPT 17142 1.643 - - - - - - 0.793 0.850 - -
10. COL4A1 ENSGALG00000036798 12749 1.569 - - - - - - 0.804 0.765 - - collagen type IV alpha 1 chain [Source:NCBI gene;Acc:395530]
11. STK4 ENSGALG00000004098 11366 1.522 - - - - - - 0.809 - - 0.713 serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
12. ENSGALG00000027854 ENSGALG00000027854 5007 0.981 - - - - - - 0.981 - - -
13. E2F6 ENSGALG00000016454 4747 0.98 - - - - - - 0.980 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
14. AP2B1 ENSGALG00000042125 13229 0.973 - - - - - - 0.973 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
15. CLCN3 ENSGALG00000009674 3704 0.973 - - - - - - 0.973 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
16. MED6 ENSGALG00000029743 9414 0.972 - - - - - - 0.972 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
17. POLR3E ENSGALG00000007008 4010 0.972 - - - - - - 0.972 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
18. TM9SF3 ENSGALG00000005534 15290 0.971 - - - - - - 0.971 - - - transmembrane 9 superfamily member 3
19. DNA2 ENSGALG00000004037 5426 0.971 - - - - - - 0.971 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
20. METTL11A METTL11A 11876 0.97 - - - - - - 0.970 - - -
21. ABCD3 ENSGALG00000005647 4844 0.97 - - - - - - 0.970 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
22. EI24 ENSGALG00000038097 24081 0.97 - - - - - - 0.970 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
23. AK6 ENSGALG00000020534 4791 0.968 - - - - - - 0.968 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
24. IRAK2 ENSGALG00000008407 5934 0.968 - - - - - - 0.968 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
25. BFAR ENSGALG00000003111 1778 0.968 - - - - - - 0.968 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
26. PNO1 ENSGALG00000009093 11153 0.968 - - - - - - 0.968 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
27. RILPL2 ENSGALG00000003321 5632 0.967 - - - - - - 0.967 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
28. RRN3 ENSGALG00000041989 3934 0.967 - - - - - - 0.967 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
29. MYST2 MYST2 8078 0.967 - - - - - - 0.967 - - -
30. INTS10 ENSGALG00000010130 6320 0.967 - - - - - - 0.967 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
31. H2AFY_1 ENSGALG00000040141 4895 0.966 - - - - - - 0.966 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
32. PPP3R1 ENSGALG00000023648 3417 0.966 - - - - - - 0.966 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
33. SEMA4B ENSGALG00000008297 11202 0.966 - - - - - - 0.966 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
34. SDF4 ENSGALG00000001872 6382 0.965 - - - - - - 0.965 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
35. MOB2 ENSGALG00000030499 3658 0.965 - - - - - - 0.965 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
36. AKAP7 ENSGALG00000029794 3287 0.964 - - - - - - 0.964 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
37. DISP1 3281 0.963 - - - - - - 0.963 - - - dispatched RND transporter family member 1, transcript variant X3
38. SOD2 ENSGALG00000011661 13178 0.963 - - - - - - 0.963 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
39. NDUFA9 ENSGALG00000017282 14358 0.963 - - - - - - 0.963 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
40. LEPROTL1 ENSGALG00000024482 4251 0.963 - - - - - - 0.963 - - - leptin receptor overlapping transcript-like 1
41. MSRA ENSGALG00000028032 2607 0.962 - - - - - - 0.962 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
42. DNAJA3 ENSGALG00000007821 3963 0.962 - - - - - - 0.962 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
43. NCOA4 ENSGALG00000002066 10544 0.962 - - - - - - 0.962 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
44. SHQ1 ENSGALG00000007798 1982 0.962 - - - - - - 0.962 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
45. NDUFB8 ENSGALG00000005704 5781 0.961 - - - - - - 0.961 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
46. ATN1 ENSGALG00000014554 3270 0.961 - - - - - - 0.961 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
47. ARHGAP29 ENSGALG00000005683 3622 0.961 - - - - - - 0.961 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
48. NPHP3 ENSGALG00000034586 1465 0.961 - - - - - - 0.961 - - - nephrocystin 3, transcript variant X1
49. KCTD9 ENSGALG00000000275 3455 0.959 - - - - - - 0.959 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
50. ARID4A ENSGALG00000012037 8554 0.958 - - - - - - 0.958 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
51. PPIF ENSGALG00000004809 5586 0.957 - - - - - - 0.957 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
52. ATE1 ENSGALG00000009502 3751 0.957 - - - - - - 0.957 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
53. EIF4G3 ENSGALG00000010084 5881 0.957 - - - - - - 0.957 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
54. RBBP6 ENSGALG00000006043 9708 0.956 - - - - - - 0.956 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
55. YBX1 ENSGALG00000004848 20992 0.956 - - - - - - 0.956 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
56. LATS2 4776 0.956 - - - - - - 0.956 - - - large tumor suppressor kinase 2
57. HACE1 ENSGALG00000015415 1194 0.956 - - - - - - 0.956 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
58. gga-mir-6643 ENSGALG00000027935 4442 0.955 - - - - - - 0.955 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
59. PMM2 ENSGALG00000007326 8260 0.954 - - - - - - 0.954 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
60. CAMKK2 ENSGALG00000040131 2795 0.953 - - - - - - 0.953 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
61. LACTB2 ENSGALG00000038745 3460 0.953 - - - - - - 0.953 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
62. GCLM ENSGALG00000005782 15789 0.953 - - - - - - 0.953 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
63. POR ENSGALG00000002053 5223 0.953 - - - - - - 0.953 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
64. SCRN1 ENSGALG00000011176 3783 0.952 - - - - - - 0.952 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
65. ENSGALG00000002923 ENSGALG00000002923 2233 0.952 - - - - - - 0.952 - - -
66. TBCCD1 ENSGALG00000006566 2696 0.952 - - - - - - 0.952 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
67. KLHL29 ENSGALG00000016495 582 0.951 - - - - - - 0.951 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
68. TMEM108 ENSGALG00000036412 2903 0.951 - - - - - - 0.951 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
69. LMNB2 ENSGALG00000000470 4364 0.95 - - - - - - 0.950 - - - lamin B2 [Source:NCBI gene;Acc:396222]
70. MAP1LC3A ENSGALG00000038721 2230 0.95 - - - - - - 0.950 - - - microtubule associated protein 1 light chain 3 alpha
71. POPDC3 ENSGALG00000027420 700 0.95 - - - - - - 0.950 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
72. SLC1A1 ENSGALG00000010187 637 0.95 - - - - - - 0.950 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
73. THOC2 ENSGALG00000008507 9501 0.949 - - - - - - 0.949 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
74. BPTF ENSGALG00000038222 7521 0.949 - - - - - - 0.949 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
75. CETN2 ENSGALG00000007510 1688 0.949 - - - - - - 0.949 - - - centrin 2 [Source:NCBI gene;Acc:422303]
76. IMPACT ENSGALG00000015093 1334 0.949 - - - - - - 0.949 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
77. GCC2 ENSGALG00000016806 1085 0.949 - - - - - - 0.949 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
78. ARNT2 ENSGALG00000006445 7050 0.947 - - - - - - 0.947 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
79. UBAC1 ENSGALG00000042564 598 0.947 - - - - - - 0.947 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
80. CCND1 ENSGALG00000007555 6715 0.946 - - - - - - 0.946 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
81. MTFMT ENSGALG00000007353 805 0.945 - - - - - - 0.945 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
82. LARP1 ENSGALG00000040109 14808 0.945 - - - - - - 0.945 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
83. SREBF2 ENSGALG00000041687 4519 0.944 - - - - - - 0.944 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
84. RPA1 ENSGALG00000003072 8023 0.944 - - - - - - 0.944 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
85. BCAS1 ENSGALG00000007796 379 0.944 - - - - - - 0.944 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
86. SDCCAG8 ENSGALG00000010713 311 0.944 - - - - - - 0.944 - - - serologically defined colon cancer antigen 8, transcript variant X5
87. MRE11A MRE11A 5754 0.944 - - - - - - 0.944 - - -
88. HDGFL3 ENSGALG00000006036 13576 0.943 - - - - - - 0.943 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
89. BTAF1 ENSGALG00000030598 3556 0.942 - - - - - - 0.942 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
90. GFM1 ENSGALG00000009634 7213 0.94 - - - - - - 0.940 - - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
91. ZMYND11 ENSGALG00000006599 5740 0.934 - - - - - - 0.934 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
92. POLA1 ENSGALG00000016312 9440 0.934 - - - - - - 0.934 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
93. UBA3 ENSGALG00000013410 6923 0.933 - - - - - - 0.933 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
94. WBP11 ENSGALG00000011745 11182 0.932 - - - - - - 0.932 - - - WW domain binding protein 11, transcript variant X1
95. MOB1B ENSGALG00000011573 567 0.932 - - - - - - 0.932 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
96. TRAM1 ENSGALG00000041112 22876 0.93 - - - - - - 0.930 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
97. NRD1 NRD1 10827 0.93 - - - - - - 0.930 - - -
98. MED7 ENSGALG00000003870 4244 0.928 - - - - - - 0.928 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
99. CHMP7 ENSGALG00000000409 8967 0.928 - - - - - - 0.928 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
100. PSMG3 ENSGALG00000004203 11240 0.927 - - - - - - 0.927 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]

There are 183 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA