Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ODC1

Gene Name Gene ID Reads Annotation
ODC1 ENSGALG00000016444 20119 ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]











Genes with expression patterns similar to ODC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ODC1 ENSGALG00000016444 20119 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]
2. ACTL6A ENSGALG00000009061 13013 1.621 - - - - - - 0.871 0.750 - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
3. PEO1 PEO1 6747 1.614 - - - - - - 0.870 0.744 - -
4. SRP14 ENSGALG00000009592 17828 1.596 0.720 - - - - - 0.876 - - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
5. MRPS23 ENSGALG00000005559 10360 1.583 - - - - - - 0.856 0.727 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
6. MRPL18 ENSGALG00000011625 7855 1.583 - - - - - - 0.857 0.726 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
7. CD2AP ENSGALG00000016720 8852 0.969 - - - - - - - 0.969 - - Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
8. ADD3 ENSGALG00000008542 13814 0.95 - - - - - - 0.950 - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
9. IST1 ENSGALG00000000811 10527 0.945 - - - - - - 0.945 - - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
10. RAB5A ENSGALG00000011272 17767 0.943 - - - - - - 0.943 - - - RAB5A, member RAS oncogene family [Source:NCBI gene;Acc:420649]
11. RNF130 ENSGALG00000005820 13797 0.937 - - - - - - 0.937 - - - ring finger protein 130 [Source:HGNC Symbol;Acc:HGNC:18280]
12. PAFAH1B1 ENSGALG00000005834 23532 0.935 - - - - - - 0.935 - - - platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:374224]
13. CHCHD4 ENSGALG00000006328 5860 0.933 - - - - - - 0.933 - - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
14. PLOD1 ENSGALG00000004531 8256 0.931 - - - - - - 0.931 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:NCBI gene;Acc:419485]
15. AIMP1 ENSGALG00000010553 17994 0.926 - - - - - - 0.926 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
16. NCBP2_1 ENSGALG00000006843 7170 0.925 - - - - - - 0.925 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
17. MPHOSPH10 ENSGALG00000003906 7029 0.924 - - - - - - 0.924 - - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
18. ASB3 ENSGALG00000008176 5422 0.922 - - - - - - 0.922 - - - ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
19. UBE3A ENSGALG00000034944 5196 0.919 - - - - - - - 0.919 - - ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
20. PFKP ENSGALG00000006939 10149 0.917 - - - - - - - 0.917 - - phosphofructokinase, platelet [Source:NCBI gene;Acc:428411]
21. PROSC 6856 0.915 - - - - - - - 0.915 - - proline synthetase cotranscribed homolog (bacterial), transcript variant X1
22. SKIV2L2 ENSGALG00000014709 2926 0.91 - - - - - - 0.910 - - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
23. C2orf47 C2orf47 17769 0.908 - - - - - - 0.908 - - -
24. NECAP2 ENSGALG00000003745 4899 0.907 - - - - - - 0.907 - - - NECAP endocytosis associated 2 [Source:NCBI gene;Acc:419464]
25. WHSC2 WHSC2 3673 0.905 - - - - - - - 0.905 - -
26. ZRANB2 ENSGALG00000011340 18994 0.903 - - - - - - 0.903 - - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
27. RBM25 ENSGALG00000009332 10842 0.902 - - - - - - 0.902 - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
28. TRIP11 ENSGALG00000010763 3146 0.896 - - - - - - 0.896 - - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
29. PDCD11 ENSGALG00000008265 8665 0.893 - - - - - - 0.893 - - - programmed cell death 11, transcript variant X2
30. MND1 ENSGALG00000009212 11765 0.893 - - - - - - 0.893 - - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
31. LAMTOR2 ENSGALG00000029881 35356 0.893 - - - - - - 0.893 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
32. STOML2 STOML2 15566 0.891 - - - - - - 0.891 - - -
33. MKI67 ENSGALG00000025996 28136 0.891 - - - - - - 0.891 - - - marker of proliferation Ki-67, transcript variant X3
34. PPA1 ENSGALG00000004442 33355 0.891 - - - - - - 0.891 - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
35. TCF7L2 ENSGALG00000008883 13688 0.89 - - - - - - 0.890 - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
36. EPRS ENSGALG00000009598 26412 0.888 - - - - - - 0.888 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
37. FUBP3 ENSGALG00000003941 12667 0.887 - - - - - - 0.887 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
38. BDH1_1 ENSGALG00000023601 6109 0.886 - - - - - - 0.886 - - - 3-hydroxybutyrate dehydrogenase, type 1
39. MRPS6 ENSGALG00000027579 8225 0.884 - - - - - - 0.884 - - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
40. CHCHD10 ENSGALG00000028810 10389 0.883 - - - - - - 0.883 - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
41. WDR36 ENSGALG00000000247 11277 0.883 - - - - - - 0.883 - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
42. PAXBP1 ENSGALG00000036833 5573 0.883 - - - - - - 0.883 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
43. NDUFB6 ENSGALG00000002033 45494 0.882 - - - - - - 0.882 - - - NADH:ubiquinone oxidoreductase subunit B6 [Source:NCBI gene;Acc:416391]
44. SLC4A3 ENSGALG00000011224 2161 0.881 - - - - - - 0.881 - - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
45. WDR5 ENSGALG00000002659 13008 0.88 - - - - - - 0.880 - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
46. PEX3 ENSGALG00000013777 3158 0.88 - - - - - - 0.880 - - - peroxisomal biogenesis factor 3
47. ADM ENSGALG00000046593 1837 0.879 - - - - - - - 0.879 - - adrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]
48. DAK DAK 13208 0.877 - - - - - - 0.877 - - -
49. PARP16 ENSGALG00000007365 9467 0.877 - - - - - - 0.877 - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
50. DPY30 ENSGALG00000010621 6818 0.877 - - - - - - 0.877 - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
51. SIGMAR1 ENSGALG00000028996 12267 0.877 - - - - - - 0.877 - - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
52. LGR5 ENSGALG00000010163 2931 0.877 - - - - - - 0.877 - - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
53. NOC3L ENSGALG00000035667 7441 0.876 - - - - - - 0.876 - - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
54. IPO11 ENSGALG00000014740 4922 0.876 - - - - - - 0.876 - - - importin 11 [Source:HGNC Symbol;Acc:HGNC:20628]
55. CCDC104 CCDC104 6584 0.876 - - - - - - 0.876 - - -
56. DLC1 ENSGALG00000013715 5297 0.875 - - - - - - 0.875 - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
57. C1H21ORF91 ENSGALG00000028290 5550 0.874 - - - - - - 0.874 - - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
58. CWF19L2 ENSGALG00000017171 4590 0.874 - - - - - - 0.874 - - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
59. ATP6V1D ENSGALG00000009570 9827 0.874 - - - - - - 0.874 - - - ATPase H+ transporting V1 subunit D [Source:NCBI gene;Acc:423280]
60. UTP18 ENSGALG00000002985 7129 0.872 - - - - - - 0.872 - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
61. SFXN4 ENSGALG00000009350 3899 0.871 - - - - - - 0.871 - - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
62. MKRN1 ENSGALG00000012852 6907 0.871 - - - - - - 0.871 - - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
63. SLC35B1 ENSGALG00000035057 10683 0.871 - - - - - - 0.871 - - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
64. NDUFS3 ENSGALG00000008084 12471 0.871 - - - - - - 0.871 - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:NCBI gene;Acc:423179]
65. JUP ENSGALG00000017414 6920 0.871 - - - - - - 0.871 - - - junction plakoglobin [Source:NCBI gene;Acc:429710]
66. HAT1 ENSGALG00000009525 24864 0.87 - - - - - - 0.870 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
67. BOD1L1 ENSGALG00000026470 9250 0.87 - - - - - - 0.870 - - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
68. DESI2 ENSGALG00000010678 4590 0.87 - - - - - - 0.870 - - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
69. FAM172A ENSGALG00000014661 10565 0.87 - - - - - - 0.870 - - - family with sequence similarity 172 member A [Source:NCBI gene;Acc:427109]
70. FAM162A ENSGALG00000007378 8290 0.87 - - - - - - 0.870 - - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
71. CWC22 ENSGALG00000009001 5984 0.87 - - - - - - 0.870 - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
72. ACOT7 ENSGALG00000000652 7976 0.87 - - - - - - 0.870 - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
73. COX7A2 ENSGALG00000015906 62347 0.869 - - - - - - 0.869 - - - cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
74. INPP5A ENSGALG00000010493 6769 0.868 - - - - - - 0.868 - - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
75. XPC ENSGALG00000006357 2484 0.867 - - - - - - 0.867 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
76. IAH1 ENSGALG00000016425 11163 0.866 - - - - - - 0.866 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:NCBI gene;Acc:421930]
77. COMMD3 ENSGALG00000007900 8629 0.866 - - - - - - 0.866 - - - COMM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23332]
78. ZBTB18 ENSGALG00000010705 3433 0.864 - - - - - - 0.864 - - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
79. MNAT1 ENSGALG00000011910 6809 0.864 - - - - - - 0.864 - - - MNAT1, CDK activating kinase assembly factor [Source:HGNC Symbol;Acc:HGNC:7181]
80. RBF RBF 49711 0.864 - - - - - - 0.864 - - -
81. FNDC3AL ENSGALG00000004169 4980 0.863 - - - - - - 0.863 - - - fibronectin type III domain containing 3A-like, transcript variant X3
82. LOC427439 ENSGALG00000003605 9312 0.861 - - - - - - 0.861 - - - Nipped-B homolog-like, transcript variant X1
83. TMEM128 ENSGALG00000014992 6567 0.861 - - - - - - 0.861 - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
84. FNTA ENSGALG00000015397 3741 0.861 - - - - - - 0.861 - - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
85. LRIG2 ENSGALG00000001733 2980 0.861 - - - - - - 0.861 - - - leucine rich repeats and immunoglobulin like domains 2 [Source:HGNC Symbol;Acc:HGNC:20889]
86. GINS1 ENSGALG00000008538 4786 0.86 - - - - - - 0.860 - - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
87. NELL2 ENSGALG00000009601 4243 0.86 - - - - - - 0.860 - - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
88. ZCCHC10 ENSGALG00000036666 5148 0.86 - - - - - - 0.860 - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
89. WBP4 ENSGALG00000016949 5858 0.86 - - - - - - 0.860 - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
90. PAIP2 11856 0.859 - - - - - - 0.859 - - - poly(A) binding protein interacting protein 2, transcript variant X1
91. MRTO4 ENSGALG00000003991 13642 0.859 - - - - - - 0.859 - - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
92. CDK5RAP2 ENSGALG00000041102 4042 0.858 - - - - - - 0.858 - - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
93. NLK ENSGALG00000005699 9066 0.858 - - - - - - 0.858 - - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
94. IFITM3 ENSGALG00000026970 4738 0.858 - - - - - - 0.858 - - - Gallus gallus interferon-induced transmembrane protein 3 (IFITM3), mRNA. [Source:RefSeq mRNA;Acc:NM_001350061]
95. GPATCH1 ENSGALG00000004839 6455 0.858 - - - - - - 0.858 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
96. DCAF4 ENSGALG00000009345 2604 0.856 - - - - - - 0.856 - - - DDB1 and CUL4 associated factor 4
97. YAF2 ENSGALG00000009540 8452 0.856 - - - - - - 0.856 - - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
98. TMEM47 ENSGALG00000027198 3619 0.855 - - - - - - 0.855 - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
99. TMEM38A ENSGALG00000003778 3867 0.855 - - - - - - 0.855 - - - transmembrane protein 38A [Source:NCBI gene;Acc:771253]
100. ETFDH ENSGALG00000009442 7671 0.854 - - - - - - 0.854 - - - electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]

There are 265 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA