Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for OCA2

Gene Name Gene ID Reads Annotation
OCA2 ENSGALG00000016740 421 OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]











Genes with expression patterns similar to OCA2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. OCA2 ENSGALG00000016740 421 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
2. COL8A1 ENSGALG00000015253 2505 6.607 - - 0.723 0.824 0.776 0.988 0.857 0.841 0.890 0.708 collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
3. COL9A3 ENSGALG00000005628 2842 5.751 - - - 0.811 0.779 0.890 0.738 0.951 0.725 0.857 collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
4. C9H2ORF82 ENSGALG00000040264 4201 5.142 - - - 0.811 0.830 0.931 - 0.853 0.816 0.901 chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
5. TIMP3 ENSGALG00000028627 8706 4.991 - - - 0.809 - 0.932 0.809 0.925 0.791 0.725 TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
6. SAMD3 ENSGALG00000032409 459 4.388 - - - 0.881 0.708 0.968 0.849 0.982 - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
7. SPON2 ENSGALG00000038433 1240 4.283 - - - 0.717 - 0.976 - 0.967 0.817 0.806 spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
8. ACAN ENSGALG00000006725 184 4.229 - - 0.706 - - 0.929 - 0.849 0.883 0.862 aggrecan [Source:NCBI gene;Acc:395798]
9. SST ENSGALG00000007361 1383 4.067 - - - 0.807 0.778 0.870 - 0.878 - 0.734 somatostatin [Source:NCBI gene;Acc:396279]
10. COL9A1 ENSGALG00000015970 3788 3.998 - - 0.706 0.819 0.803 0.956 0.714 - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
11. OSF-2 OSF-2 10433 3.953 - - - 0.723 - 0.774 - 0.844 0.849 0.763
12. EMILIN3 ENSGALG00000030012 6200 3.918 - - 0.701 0.797 0.784 0.935 0.701 - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
13. RAB38 ENSGALG00000028018 1046 3.597 - - - 0.881 0.825 0.953 - 0.938 - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
14. COL9A2 ENSGALG00000027526 4685 3.395 - - - 0.858 0.728 0.939 - 0.870 - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
15. T ENSGALG00000011489 2619 3.328 - - - 0.891 0.752 0.975 0.710 - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
16. SCARA3 ENSGALG00000026651 2559 3.199 - - - 0.710 - 0.919 - 0.727 0.843 - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
17. TAC1 ENSGALG00000009737 2211 2.546 - - - 0.824 - 0.953 - 0.769 - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
18. PCDH17 ENSGALG00000016941 1006 2.537 - - - - - 0.956 - 0.854 - 0.727 protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
19. ZNF385B ENSGALG00000009012 290 2.374 - - - 0.718 - 0.935 0.721 - - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
20. LECT1 LECT1 12694 2.284 - - - 0.717 - - 0.738 0.829 - -
21. MYOG ENSGALG00000000172 460 2.217 - - - - 0.716 - - - 0.754 0.747 myogenin [Source:NCBI gene;Acc:374004]
22. B3GNT7 ENSGALG00000007701 929 1.812 - - - - - 0.939 - - 0.873 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
23. LRRTM1 ENSGALG00000015967 85 1.802 - - - - - 0.893 - 0.909 - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
24. NPY7R ENSGALG00000021303 215 1.776 - - - 0.855 - 0.921 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
25. SLC15A5 ENSGALG00000013097 213 1.674 - - - - - 0.934 - - - 0.740 solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
26. SLC24A4 ENSGALG00000010793 238 1.665 - - - - - - - 0.747 0.918 - solute carrier family 24 member 4 [Source:HGNC Symbol;Acc:HGNC:10978]
27. SCARA5 ENSGALG00000016580 712 1.652 - - - - - 0.926 - 0.726 - - scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]
28. PABPN1L ENSGALG00000006242 3 1.651 - - - - - 0.742 - 0.909 - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
29. C17orf105 C17orf105 11 1.651 - - - - - 0.742 - 0.909 - -
30. MAVS ENSGALG00000040428 1 1.651 - - - - - 0.742 - 0.909 - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
31. IYD ENSGALG00000012392 315 1.638 - - - - - 0.725 - - 0.913 - iodotyrosine deiodinase [Source:HGNC Symbol;Acc:HGNC:21071]
32. SNAPC1 ENSGALG00000011868 65 1.637 - - - - - 0.728 - 0.909 - - small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
33. WWP2 ENSGALG00000000699 5040 1.607 - - - - - 0.813 - - 0.794 - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
34. CCDC3 ENSGALG00000030140 258 1.584 - - - 0.729 - - - - - 0.855 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
35. CYP1B1 ENSGALG00000025822 3143 1.576 - - - - - - - - 0.850 0.726 cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
36. SCIN ENSGALG00000010770 883 1.572 - - - 0.796 - 0.776 - - - - scinderin [Source:NCBI gene;Acc:420588]
37. PALMD ENSGALG00000005442 901 1.544 - - - 0.708 - - - - - 0.836 palmdelphin [Source:NCBI gene;Acc:424475]
38. COL11A1 ENSGALG00000005180 244 1.542 - - - 0.779 - - - - 0.763 - collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
39. SHH ENSGALG00000006379 1943 1.468 - - - - - - - 0.718 0.750 - sonic hedgehog [Source:NCBI gene;Acc:395615]
40. BAFF BAFF 40 1.466 - - - - - 0.742 - - - 0.724
41. SPON1 ENSGALG00000038775 16503 1.446 - - - - - - 0.742 - 0.704 - spondin 1 [Source:NCBI gene;Acc:395657]
42. GPR158 ENSGALG00000007667 111 0.985 - - - - - - - 0.985 - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
43. APOD ENSGALG00000006995 2 0.984 - - - - - 0.984 - - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
44. HOXA10 ENSGALG00000026631 1 0.984 - - - - - 0.984 - - - - homeobox A10 [Source:NCBI gene;Acc:776143]
45. KCNG1 ENSGALG00000007980 26 0.984 - - - - - 0.984 - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
46. RRAD ENSGALG00000005140 183 0.978 - - - - - 0.978 - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
47. ENSGALG00000008822 ENSGALG00000008822 221 0.976 - - - - - 0.976 - - - -
48. FNDC1 ENSGALG00000011663 1040 0.973 - - - - - - - 0.973 - - fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
49. PTH3R PTH3R 214 0.964 - - - - - 0.964 - - - -
50. LEFTY2 ENSGALG00000009256 1 0.964 - - - - - 0.964 - - - - left-right determination factor 2 [Source:NCBI gene;Acc:395529]
51. PIGM ENSGALG00000010768 41 0.954 - - - - - - - 0.954 - - phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
52. RASGRF2 ENSGALG00000015598 30 0.954 - - - - - - - 0.954 - - Ras protein specific guanine nucleotide releasing factor 2 [Source:HGNC Symbol;Acc:HGNC:9876]
53. CCK ENSGALG00000029788 213 0.952 - - - - - 0.952 - - - - cholecystokinin [Source:NCBI gene;Acc:414884]
54. CCL17 ENSGALG00000024466 10 0.929 - - - - - 0.929 - - - - C-C motif chemokine ligand 17 [Source:NCBI gene;Acc:415652]
55. WIF1 ENSGALG00000039209 863 0.924 - - - - - 0.924 - - - - WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]
56. SMC1B ENSGALG00000014228 19 0.92 - - - - - - - 0.920 - - structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
57. ITGA2 ENSGALG00000014903 31 0.919 - - - - - - - 0.919 - - integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]
58. gga-mir-6561 ENSGALG00000026650 135 0.919 - - - - - - - 0.919 - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
59. WDR27 ENSGALG00000037464 9 0.919 - - - - - - - 0.919 - - WD repeat domain 27
60. ENSGALG00000007420 ENSGALG00000007420 7 0.919 - - - - - - - 0.919 - -
61. U2_1 U2_1 13 0.919 - - - - - - - 0.919 - -
62. EPN3 ENSGALG00000023279 10 0.919 - - - - - - - 0.919 - - epsin 3 [Source:HGNC Symbol;Acc:HGNC:18235]
63. SRMS ENSGALG00000005852 174 0.919 - - - - - - - 0.919 - - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
64. TNS3 ENSGALG00000039139 63 0.919 - - - - - - - 0.919 - - tensin 3 [Source:NCBI gene;Acc:420792]
65. UCP3 ENSGALG00000017316 30 0.919 - - - - - - - 0.919 - - uncoupling protein 3 [Source:NCBI gene;Acc:373896]
66. GNOT1 GNOT1 22 0.918 - - - - - - - 0.918 - -
67. EDAR ENSGALG00000016809 81 0.911 - - - - - - - 0.911 - - ectodysplasin A receptor [Source:NCBI gene;Acc:428015]
68. MYL1 ENSGALG00000002907 1300 0.91 - - - - - 0.910 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
69. RNF215 ENSGALG00000040925 19 0.909 - - - - - - - 0.909 - - ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
70. GIPC2 ENSGALG00000008902 6 0.909 - - - - - - - 0.909 - - GIPC PDZ domain containing family member 2 [Source:HGNC Symbol;Acc:HGNC:18177]
71. SLC17A8 ENSGALG00000041122 57 0.909 - - - - - - - 0.909 - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
72. LPGAT1 ENSGALG00000009848 33 0.909 - - - - - - - 0.909 - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
73. ENSGALG00000026501 ENSGALG00000026501 39 0.909 - - - - - - - 0.909 - -
74. OLFM4 ENSGALG00000016943 7 0.909 - - - - - - - 0.909 - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
75. CMTR1 ENSGALG00000010149 12 0.909 - - - - - - - 0.909 - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
76. FNIP1 ENSGALG00000017462 4 0.909 - - - - - - - 0.909 - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
77. BTBD17 ENSGALG00000023359 87 0.909 - - - - - - - 0.909 - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
78. VIL1 ENSGALG00000037286 5 0.909 - - - - - - - 0.909 - - villin 1 [Source:NCBI gene;Acc:396423]
79. CRIP2 ENSGALG00000026471 4 0.909 - - - - - - - 0.909 - - cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]
80. SH3BP4 ENSGALG00000004140 4 0.909 - - - - - - - 0.909 - - SH3 domain binding protein 4 [Source:HGNC Symbol;Acc:HGNC:10826]
81. ABHD14A 174 0.909 - - - - - - - 0.909 - - abhydrolase domain containing 14A
82. TOR1BL ENSGALG00000023709 1 0.909 - - - - - - - 0.909 - - torsin family 1, member B-like [Source:NCBI gene;Acc:417192]
83. SCN3A ENSGALG00000011040 62 0.909 - - - - - - - 0.909 - - sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
84. ECT2 ENSGALG00000009157 31 0.909 - - - - - - - 0.909 - - epithelial cell transforming 2, transcript variant X7
85. CELSR1 ENSGALG00000043355 19 0.909 - - - - - - - 0.909 - - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
86. F13B ENSGALG00000002369 1 0.909 - - - - - - - 0.909 - - coagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]
87. ENSGALG00000028428 ENSGALG00000028428 3 0.909 - - - - - - - 0.909 - -
88. ENSGALG00000018875 ENSGALG00000018875 6 0.909 - - - - - - - 0.909 - -
89. ARHGAP39 ENSGALG00000001536 15 0.909 - - - - - - - 0.909 - - Rho GTPase activating protein 39, transcript variant X2
90. UPK3A ENSGALG00000014227 7 0.909 - - - - - - - 0.909 - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
91. SLC35A3 12 0.909 - - - - - - - 0.909 - - solute carrier family 35 member A3, transcript variant X7
92. C11ORF61 C11ORF61 41 0.909 - - - - - - - 0.909 - -
93. GPR183 ENSGALG00000016881 5 0.909 - - - - - - - 0.909 - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
94. KREMEN1 ENSGALG00000005808 5 0.909 - - - - - - - 0.909 - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
95. GAL9 GAL9 1 0.909 - - - - - - - 0.909 - -
96. MLH1 ENSGALG00000039169 19 0.909 - - - - - - - 0.909 - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
97. SI ENSGALG00000009511 5 0.909 - - - - - - - 0.909 - - sucrase-isomaltase
98. GRID2 ENSGALG00000010397 6 0.909 - - - - - - - 0.909 - - glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
99. GRK7 ENSGALG00000002800 0 0.909 - - - - - - - 0.909 - - G protein-coupled receptor kinase 7 [Source:HGNC Symbol;Acc:HGNC:17031]
100. HHIPL2 ENSGALG00000045729 9 0.909 - - - - - - - 0.909 - - HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]

There are 150 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA