Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for OBSCN

Gene Name Gene ID Reads Annotation
OBSCN ENSGALG00000032534 20 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF [Source:HGNC Symbol;Acc:HGNC:15719]











Genes with expression patterns similar to OBSCN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. OBSCN ENSGALG00000032534 20 5 - - 1.000 1.000 1.000 - - 1.000 - 1.000 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF [Source:HGNC Symbol;Acc:HGNC:15719]
2. ZNF511 ENSGALG00000003533 234 1 - - - - - - - 1.000 - - zinc finger protein 511 [Source:HGNC Symbol;Acc:HGNC:28445]
3. ENSGALG00000024266 ENSGALG00000024266 5 1 - - - - - - - 1.000 - -
4. PACRGL ENSGALG00000014406 18 1 - - - - - - - 1.000 - - parkin coregulated like [Source:HGNC Symbol;Acc:HGNC:28442]
5. FAM83B ENSGALG00000016299 17 0.997 - - - - - - - 0.997 - - family with sequence similarity 83 member B [Source:HGNC Symbol;Acc:HGNC:21357]
6. NEK8 ENSGALG00000003979 4 0.997 - - - - - - - 0.997 - - NIMA related kinase 8 [Source:HGNC Symbol;Acc:HGNC:13387]
7. PGA PGA 1 0.997 - - - - - - - 0.997 - -
8. FMO4 ENSGALG00000040292 1 0.997 - - - - - - - 0.997 - - flavin containing monooxygenase 4 [Source:HGNC Symbol;Acc:HGNC:3772]
9. COL19A1 ENSGALG00000043584 38 0.997 - - - - - - - 0.997 - - collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
10. LRCH3 ENSGALG00000007595 21 0.997 - - - - - - - 0.997 - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
11. CHRND ENSGALG00000007899 55 0.997 - - - - - - - 0.997 - - cholinergic receptor nicotinic delta subunit [Source:NCBI gene;Acc:424940]
12. ENSGALG00000023094 ENSGALG00000023094 15 0.997 - - - - - - - 0.997 - -
13. ENSGALG00000018479 ENSGALG00000018479 10 0.997 - - - - - - - 0.997 - -
14. KCNA4 ENSGALG00000012142 6 0.997 - - - - - - - 0.997 - - potassium voltage-gated channel subfamily A member 4 [Source:NCBI gene;Acc:395721]
15. ZC2HC1A ENSGALG00000035932 17 0.997 - - - - - - - 0.997 - - zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]
16. SOWAHC ENSGALG00000026360 23 0.997 - - - - - - - 0.997 - - sosondowah ankyrin repeat domain family member C [Source:HGNC Symbol;Acc:HGNC:26149]
17. AIG1 ENSGALG00000013780 27 0.997 - - - - - - - 0.997 - - androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:21607]
18. GPR65 ENSGALG00000010595 2 0.997 - - - - - - - 0.997 - - G protein-coupled receptor 65 [Source:HGNC Symbol;Acc:HGNC:4517]
19. SYT4 ENSGALG00000042626 384 0.997 - - - - - - - 0.997 - - synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
20. GRK5 ENSGALG00000009403 45 0.986 - - - - - - - 0.986 - - G protein-coupled receptor kinase 5 [Source:HGNC Symbol;Acc:HGNC:4544]
21. MAPK1 ENSGALG00000001501 34 0.981 - - - - - - - 0.981 - - mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
22. LONRF3 ENSGALG00000008860 55 0.965 - - - - - - - 0.965 - - LON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
23. SIRT5 ENSGALG00000012692 3196 0.965 - - - - - - - 0.965 - - sirtuin 5 [Source:NCBI gene;Acc:420834]
24. AGBL5 ENSGALG00000038639 25 0.959 - - - - - - - 0.959 - - ATP/GTP binding protein like 5 [Source:HGNC Symbol;Acc:HGNC:26147]
25. NYAP2 ENSGALG00000004966 24 0.945 - - - - - - - 0.945 - - neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 [Source:HGNC Symbol;Acc:HGNC:29291]
26. CCDC14 ENSGALG00000044814 65 0.945 - - - - - - - 0.945 - - coiled-coil domain containing 14 [Source:HGNC Symbol;Acc:HGNC:25766]
27. KCNJ11 ENSGALG00000020505 196 0.944 - - - - - - - 0.944 - - potassium voltage-gated channel subfamily J member 11 [Source:HGNC Symbol;Acc:HGNC:6257]
28. DCLK3 ENSGALG00000034493 50 0.932 - - - - - - - 0.932 - - doublecortin like kinase 3 [Source:HGNC Symbol;Acc:HGNC:19005]
29. TMEM8B ENSGALG00000002386 32 0.919 - - - - - - - 0.919 - - transmembrane protein 8B [Source:HGNC Symbol;Acc:HGNC:21427]
30. PTPRS ENSGALG00000004048 70 0.918 - - - - - - - 0.918 - - protein tyrosine phosphatase, receptor type S [Source:NCBI gene;Acc:396375]
31. IMPG2 ENSGALG00000015322 74 0.911 - - - - - - - 0.911 - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
32. PEX7 ENSGALG00000013874 34 0.897 - - - - - - - 0.897 - - peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:421687]
33. CHAMP1 ENSGALG00000016813 508 0.881 - - - - - - - 0.881 - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
34. SAMD3 ENSGALG00000032409 459 0.88 - - - 0.880 - - - - - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
35. PTPN3 ENSGALG00000022909 6 0.878 - - - - - - - 0.878 - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
36. EPG5 ENSGALG00000036259 71 0.878 - - - - - - - 0.878 - - ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
37. SPP2 ENSGALG00000004129 34 0.874 - - - - - - - 0.874 - - secreted phosphoprotein 2 [Source:NCBI gene;Acc:396080]
38. RAB38 ENSGALG00000028018 1046 0.871 - - - 0.871 - - - - - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
39. GRIK1 ENSGALG00000015835 297 0.868 - - - - - - - 0.868 - - glutamate ionotropic receptor kainate type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4579]
40. SYPL1 ENSGALG00000029006 126 0.867 - - - - - - - 0.867 - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
41. CLEC16A ENSGALG00000007167 66 0.867 - - - - - - - 0.867 - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
42. ADAL ENSGALG00000004038 113 0.867 - - - - - - - - - 0.867 adenosine deaminase like [Source:NCBI gene;Acc:415391]
43. T ENSGALG00000011489 2619 0.866 - - - 0.866 - - - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
44. MORN5 ENSGALG00000044151 95 0.86 - - - - - - - 0.860 - - MORN repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:17841]
45. HTR7_1 ENSGALG00000040549 86 0.856 - - - - - - - 0.856 - - 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
46. NPY7R ENSGALG00000021303 215 0.849 - - - 0.849 - - - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
47. HAPLN4 ENSGALG00000026563 9 0.848 - - - - - - - 0.848 - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
48. TAC1 ENSGALG00000009737 2211 0.847 - - - 0.847 - - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
49. TMEM173 ENSGALG00000041129 93 0.842 - - - - - - - 0.842 - - transmembrane protein 173 [Source:NCBI gene;Acc:768990]
50. SLC30A9 ENSGALG00000031415 36 0.822 - - - - - - - 0.822 - - solute carrier family 30 member 9
51. ACTR10L ENSGALG00000012085 30 0.821 - - - - - - - 0.821 - - actin-related protein 10-like
52. ADAM11 ENSGALG00000035673 45 0.819 - - - - - - - 0.819 - - ADAM metallopeptidase domain 11 [Source:HGNC Symbol;Acc:HGNC:189]
53. ENO4 ENSGALG00000009254 19 0.813 - - - - 0.813 - - - - - enolase 4 [Source:HGNC Symbol;Acc:HGNC:31670]
54. PCDH7 ENSGALG00000033883 6 0.813 - - - - 0.813 - - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
55. ENSGALG00000016601 ENSGALG00000016601 16 0.813 - - - - 0.813 - - - - -
56. XG ENSGALG00000029002 17 0.813 - - - - 0.813 - - - - - Xg blood group
57. ENSGALG00000006897 ENSGALG00000006897 13 0.813 - - - - 0.813 - - - - -
58. CD101 12 0.813 - - - - 0.813 - - - - - CD101 molecule, transcript variant X4
59. MAT2A ENSGALG00000015366 17 0.813 - - - - 0.813 - - - - - methionine adenosyltransferase 2A, transcript variant X1
60. UGP2 ENSGALG00000008855 20 0.813 - - - - 0.813 - - - - - UDP-glucose pyrophosphorylase 2 [Source:NCBI gene;Acc:373900]
61. CLCA1 ENSGALG00000006322 5 0.813 - - - - 0.813 - - - - - chloride channel accessory 1 [Source:HGNC Symbol;Acc:HGNC:2015]
62. GNB4 ENSGALG00000008983 26 0.813 - - - - 0.813 - - - - - G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
63. EGLN3 ENSGALG00000010001 32 0.813 - - - - 0.813 - - - - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
64. COL8A1 ENSGALG00000015253 2505 0.811 - - - 0.811 - - - - - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
65. SPRTN ENSGALG00000011065 24 0.805 - - - - 0.805 - - - - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]
66. COL11A1 ENSGALG00000005180 244 0.805 - - - 0.805 - - - - - - collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
67. TIMP3 ENSGALG00000028627 8706 0.803 - - - 0.803 - - - - - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
68. RNF6 ENSGALG00000017105 11 0.801 - - - - 0.801 - - - - - ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]
69. PLD5 ENSGALG00000010737 5 0.8 - - - - - - - - - 0.800 phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
70. C9H2ORF82 ENSGALG00000040264 4201 0.799 - - - 0.799 - - - - - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
71. FYCO1 ENSGALG00000040212 75 0.799 - - - - - - - 0.799 - - FYVE and coiled-coil domain containing 1 [Source:NCBI gene;Acc:428453]
72. DENND5A ENSGALG00000005840 54 0.798 - - - 0.798 - - - - - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
73. WDR65 WDR65 26 0.787 - - - - - - - - - 0.787
74. C7orf63 C7orf63 147 0.785 - - - - - - - 0.785 - -
75. ST6GAL1 ENSGALG00000005550 20 0.784 - - - - - - - 0.784 - - ST6 beta-galactoside alpha-2,6-sialyltransferase 1 [Source:NCBI gene;Acc:396169]
76. GSC ENSGALG00000010974 7 0.782 - - - - - - - - - 0.782 goosecoid homeobox [Source:NCBI gene;Acc:396273]
77. ATP8A2 ENSGALG00000017106 31 0.782 - - - - 0.782 - - - - - ATPase phospholipid transporting 8A2 [Source:HGNC Symbol;Acc:HGNC:13533]
78. ADAMTS20 ENSGALG00000009572 67 0.781 - - - - - - - 0.781 - - ADAM metallopeptidase with thrombospondin type 1 motif 20 [Source:HGNC Symbol;Acc:HGNC:17178]
79. TXNRD1 ENSGALG00000035345 4784 0.775 - - - 0.775 - - - - - - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
80. ARMC4 ENSGALG00000007417 71 0.772 - - - - 0.772 - - - - - armadillo repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:25583]
81. LRRTM1 ENSGALG00000015967 85 0.771 - - - 0.771 - - - - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
82. HSF3 ENSGALG00000040662 140 0.764 - - - - - - - 0.764 - - Heat shock factor protein 3 [Source:NCBI gene;Acc:422169]
83. OCA2 ENSGALG00000016740 421 0.763 - - - 0.763 - - - - - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
84. ITPKB ENSGALG00000009068 324 0.757 - - - - - - - - - 0.757 inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
85. COL9A1 ENSGALG00000015970 3788 0.749 - - - 0.749 - - - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
86. TAT ENSGALG00000000893 11 0.746 - - - - 0.746 - - - - - tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573]
87. MED13L ENSGALG00000008238 27 0.746 - - - - 0.746 - - - - - mediator complex subunit 13 like [Source:HGNC Symbol;Acc:HGNC:22962]
88. C1H21ORF59 ENSGALG00000037962 100 0.741 - - - - - - - 0.741 - - chromosome 1 open reading frame, human C21orf59 [Source:NCBI gene;Acc:418497]
89. CDCP2 ENSGALG00000010752 4 0.74 - - - - 0.740 - - - - - CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
90. MAGI3 ENSGALG00000001816 12 0.731 - - - - 0.731 - - - - - membrane associated guanylate kinase, WW and PDZ domain containing 3 [Source:NCBI gene;Acc:419877]
91. SOX6 ENSGALG00000006074 102 0.729 - - - 0.729 - - - - - - Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
92. CCDC33 7 0.728 - - - - 0.728 - - - - - coiled-coil domain containing 33, transcript variant X2
93. TAF4B ENSGALG00000015122 28 0.728 - - - - 0.728 - - - - - TATA-box binding protein associated factor 4b [Source:HGNC Symbol;Acc:HGNC:11538]
94. SYNPO ENSGALG00000027330 5 0.728 - - 0.728 - - - - - - - synaptopodin [Source:HGNC Symbol;Acc:HGNC:30672]
95. SCARA3 ENSGALG00000026651 2559 0.724 - - - 0.724 - - - - - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
96. CNKSR2 ENSGALG00000016391 131 0.723 - - - - - - - - - 0.723 connector enhancer of kinase suppressor of Ras 2, transcript variant X1
97. SPAG16 ENSGALG00000003148 35 0.717 - - - - - - - 0.717 - - sperm associated antigen 16 [Source:HGNC Symbol;Acc:HGNC:23225]
98. ENPP3 ENSGALG00000037587 25 0.714 - - 0.714 - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
99. CDAN1 ENSGALG00000009156 110 0.712 - - - - 0.712 - - - - - codanin 1, transcript variant X2
100. GPATCH8 ENSGALG00000041556 484 0.711 - - - - - - - 0.711 - - G-patch domain containing 8 [Source:HGNC Symbol;Acc:HGNC:29066]

There are 39 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA