Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Nr4a1

Gene Name Gene ID Reads Annotation
Nr4a1 ENSMUSG00000023034 61 nuclear receptor subfamily 4, group A, member 1 [Source:MGI Symbol;Acc:MGI:1352454]







Genes with expression patterns similar to Nr4a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Nr4a1 ENSMUSG00000023034 61 6 1.000 1.000 1.000 1.000 1.000 1.000 nuclear receptor subfamily 4, group A, member 1 [Source:MGI Symbol;Acc:MGI:1352454]
2. Prg4 ENSMUSG00000006014 30 1.622 - - 0.798 - - 0.824 proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) [Source:MGI Symbol;Acc:MGI:1891344]
3. Gm6808 ENSMUSG00000090162 21 1.619 - - 0.784 - - 0.835 predicted gene 6808 [Source:MGI Symbol;Acc:MGI:3645881]
4. Psmb8 ENSMUSG00000024338 16 1.544 - 0.729 0.815 - - - proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) [Source:MGI Symbol;Acc:MGI:1346527]
5. Cyb5r2 ENSMUSG00000048065 10 1.536 - 0.729 0.807 - - - cytochrome b5 reductase 2 [Source:MGI Symbol;Acc:MGI:2444415]
6. Gm10047 Gm10047 162 1.534 - - 0.755 - - 0.779
7. Rnf43 ENSMUSG00000034177 18 1.477 - - 0.750 - 0.727 - ring finger protein 43 [Source:MGI Symbol;Acc:MGI:2442609]
8. Hs3st1 ENSMUSG00000051022 53 0.88 - - - - - 0.880 heparan sulfate (glucosamine) 3-O-sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1201606]
9. Nrn1l ENSMUSG00000044287 8 0.879 - 0.879 - - - - neuritin 1-like [Source:MGI Symbol;Acc:MGI:2443642]
10. Ankrd23 ENSMUSG00000067653 22 0.865 - - 0.865 - - - ankyrin repeat domain 23 [Source:MGI Symbol;Acc:MGI:1925571]
11. 1700122E12Rik ENSMUSG00000087685 6 0.856 - - 0.856 - - - RIKEN cDNA 1700122E12 gene [Source:MGI Symbol;Acc:MGI:1920869]
12. Gm3248 ENSMUSG00000091275 31 0.854 - - 0.854 - - - predicted gene 3248 [Source:MGI Symbol;Acc:MGI:3781426]
13. Cela1 ENSMUSG00000023031 19 0.85 - - - - - 0.850 chymotrypsin-like elastase family, member 1 [Source:MGI Symbol;Acc:MGI:95314]
14. Slfn2 ENSMUSG00000072620, ENSMUSG00000115954, ENSMUSG00000115991, ENSMUSG00000116022 38 0.849 - - 0.849 - - - schlafen 2 [Source:NCBI gene;Acc:20556]
15. Cmya5 ENSMUSG00000047419 11 0.849 0.849 - - - - - cardiomyopathy associated 5 [Source:MGI Symbol;Acc:MGI:1923719]
16. Ccdc62 ENSMUSG00000061882 38 0.848 - - 0.848 - - - coiled-coil domain containing 62 [Source:MGI Symbol;Acc:MGI:2684996]
17. Cdk15 ENSMUSG00000026023 32 0.846 - - 0.846 - - - cyclin-dependent kinase 15 [Source:MGI Symbol;Acc:MGI:3583944]
18. Gm12469 ENSMUSG00000083624 31 0.845 - - - - - 0.845 predicted gene 12469 [Source:MGI Symbol;Acc:MGI:3652114]
19. A330094K24Rik ENSMUSG00000097666, ENSMUSG00000116195 12 0.843 - - 0.843 - - - RIKEN cDNA A330094K24 gene [Source:MGI Symbol;Acc:MGI:1924343]
20. C2 ENSMUSG00000024371 20 0.842 - - 0.842 - - - complement component 2 (within H-2S) [Source:MGI Symbol;Acc:MGI:88226]
21. Gm27000 ENSMUSG00000097961 2 0.841 - - 0.841 - - - predicted gene, 27000 [Source:MGI Symbol;Acc:MGI:5504115]
22. Pydc3 53 0.84 - - 0.840 - - - pyrin domain containing 3, transcript variant X1
23. Ptger3 ENSMUSG00000040016 181 0.839 - - - - - 0.839 prostaglandin E receptor 3 (subtype EP3) [Source:MGI Symbol;Acc:MGI:97795]
24. Agap2 ENSMUSG00000025422 12 0.839 - - 0.839 - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:MGI Symbol;Acc:MGI:3580016]
25. Ppef2 ENSMUSG00000029410 7 0.839 - - - - - 0.839 protein phosphatase, EF hand calcium-binding domain 2 [Source:MGI Symbol;Acc:MGI:1342304]
26. Wee1 ENSMUSG00000031016 67 0.837 - - 0.837 - - - WEE 1 homolog 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:103075]
27. Asic3 ENSMUSG00000038276 10 0.836 - - 0.836 - - - acid-sensing (proton-gated) ion channel 3 [Source:MGI Symbol;Acc:MGI:2159339]
28. Icos ENSMUSG00000026009 50 0.836 - - - - - 0.836 inducible T cell co-stimulator [Source:MGI Symbol;Acc:MGI:1858745]
29. Gm7290 ENSMUSG00000078192 8 0.835 - - - - - 0.835 predicted pseudogene 7290 [Source:MGI Symbol;Acc:MGI:3646633]
30. A530072M11Rik ENSMUSG00000085112 8 0.835 - - - - - 0.835 RIKEN cDNA gene A530072M11 [Source:MGI Symbol;Acc:MGI:4440477]
31. Cd1d2 ENSMUSG00000041750 6 0.835 - - - - - 0.835 CD1d2 antigen [Source:MGI Symbol;Acc:MGI:107675]
32. Gpr165 ENSMUSG00000031210 8 0.835 - - 0.835 - - - G protein-coupled receptor 165 [Source:MGI Symbol;Acc:MGI:1923456]
33. A730032A03Rik ENSMUSG00000085649 4 0.835 - - - - - 0.835 RIKEN cDNA A730032A03 gene [Source:MGI Symbol;Acc:MGI:2444311]
34. Upk2 ENSMUSG00000041523 4 0.835 - - - - - 0.835 uroplakin 2 [Source:MGI Symbol;Acc:MGI:98913]
35. Pdx1 ENSMUSG00000029644 41 0.835 - - - - - 0.835 pancreatic and duodenal homeobox 1 [Source:MGI Symbol;Acc:MGI:102851]
36. Vmn2r42 ENSMUSG00000070844 9 0.835 - - - - - 0.835 vomeronasal 2, receptor 42 [Source:MGI Symbol;Acc:MGI:1316666]
37. Prrg4 ENSMUSG00000027171 19 0.835 - - 0.835 - - - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:MGI Symbol;Acc:MGI:2442211]
38. Gm8824 ENSMUSG00000098028 8 0.835 - - - - - 0.835 predicted gene 8824 [Source:MGI Symbol;Acc:MGI:3647096]
39. 5430427O19Rik ENSMUSG00000025058 9 0.835 - - - - - 0.835 RIKEN cDNA 5430427O19 gene [Source:MGI Symbol;Acc:MGI:1918648]
40. Cyp2f2 ENSMUSG00000052974 4 0.835 - - - - - 0.835 cytochrome P450, family 2, subfamily f, polypeptide 2 [Source:MGI Symbol;Acc:MGI:88608]
41. Catsperg1 ENSMUSG00000049676 10 0.834 - - 0.834 - - - cation channel sperm associated auxiliary subunit gamma 1 [Source:MGI Symbol;Acc:MGI:2443617]
42. Itga7 ENSMUSG00000025348 57 0.834 - - 0.834 - - - integrin alpha 7 [Source:MGI Symbol;Acc:MGI:102700]
43. Polh ENSMUSG00000023953 65 0.833 - - - - - 0.833 polymerase (DNA directed), eta (RAD 30 related) [Source:MGI Symbol;Acc:MGI:1891457]
44. Ccdc149 ENSMUSG00000045790 26 0.832 - - 0.832 - - - coiled-coil domain containing 149 [Source:MGI Symbol;Acc:MGI:2685293]
45. Fcer2a ENSMUSG00000005540 20 0.832 - - - - - 0.832 Fc receptor, IgE, low affinity II, alpha polypeptide [Source:MGI Symbol;Acc:MGI:95497]
46. Vstm2a ENSMUSG00000048834 27 0.832 - - 0.832 - - - V-set and transmembrane domain containing 2A [Source:MGI Symbol;Acc:MGI:2384826]
47. Ly6g6d ENSMUSG00000073413 17 0.831 - - 0.831 - - - lymphocyte antigen 6 complex, locus G6D [Source:MGI Symbol;Acc:MGI:2148931]
48. Gjc3 ENSMUSG00000056966 10 0.831 - - 0.831 - - - gap junction protein, gamma 3 [Source:MGI Symbol;Acc:MGI:2153041]
49. Rorc ENSMUSG00000028150 3 0.831 - - 0.831 - - - RAR-related orphan receptor gamma [Source:MGI Symbol;Acc:MGI:104856]
50. Sycp3 ENSMUSG00000020059 2 0.831 - - 0.831 - - - synaptonemal complex protein 3 [Source:MGI Symbol;Acc:MGI:109542]
51. Gm10612 ENSMUSG00000090174 2 0.831 - - 0.831 - - - predicted gene 10612 [Source:MGI Symbol;Acc:MGI:3708796]
52. Efcab5 ENSMUSG00000050944 8 0.831 - - 0.831 - - - EF-hand calcium binding domain 5 [Source:MGI Symbol;Acc:MGI:2442440]
53. Ccdc60 ENSMUSG00000043913 93 0.831 - - 0.831 - - - coiled-coil domain containing 60 [Source:MGI Symbol;Acc:MGI:2141043]
54. Cyp4f15 ENSMUSG00000073424 23 0.83 - - 0.830 - - - cytochrome P450, family 4, subfamily f, polypeptide 15 [Source:MGI Symbol;Acc:MGI:2146921]
55. Gm2244 ENSMUSG00000092036 15 0.83 - - - - - 0.830 predicted gene 2244 [Source:MGI Symbol;Acc:MGI:3780414]
56. Gm11263 ENSMUSG00000083496 21 0.828 - - - - - 0.828 predicted gene 11263 [Source:MGI Symbol;Acc:MGI:3651899]
57. Slc19a3 ENSMUSG00000038496 8 0.827 - - 0.827 - - - solute carrier family 19, member 3 [Source:MGI Symbol;Acc:MGI:1931307]
58. Gm26588 ENSMUSG00000097730 5 0.825 - - 0.825 - - - predicted gene, 26588 [Source:MGI Symbol;Acc:MGI:5477082]
59. Arl11 ENSMUSG00000043157 10 0.824 - - 0.824 - - - ADP-ribosylation factor-like 11 [Source:MGI Symbol;Acc:MGI:2444054]
60. Calr3 ENSMUSG00000019732 16 0.824 - - 0.824 - - - calreticulin 3 [Source:MGI Symbol;Acc:MGI:1920566]
61. Gm16266 Gm16266 27 0.823 - - 0.823 - - -
62. Gm2061 ENSMUSG00000097615 33 0.822 - - 0.822 - - - predicted gene 2061 [Source:MGI Symbol;Acc:MGI:3780228]
63. Gm4353 ENSMUSG00000091900 44 0.822 - - 0.822 - - - predicted gene 4353 [Source:MGI Symbol;Acc:MGI:3782538]
64. Timm8a2 ENSMUSG00000071229 14 0.821 - - - - - 0.821 translocase of inner mitochondrial membrane 8A2 [Source:MGI Symbol;Acc:MGI:3615492]
65. Slc5a7 ENSMUSG00000023945 61 0.821 - - 0.821 - - - solute carrier family 5 (choline transporter), member 7 [Source:MGI Symbol;Acc:MGI:1927126]
66. Ncf4 ENSMUSG00000071715 18 0.819 - - 0.819 - - - neutrophil cytosolic factor 4 [Source:MGI Symbol;Acc:MGI:109186]
67. Prss22 ENSMUSG00000045027 20 0.819 - - 0.819 - - - protease, serine 22 [Source:MGI Symbol;Acc:MGI:1918085]
68. Gm25099 ENSMUSG00000095676 10 0.817 - - - - - 0.817 predicted gene, 25099 [Source:MGI Symbol;Acc:MGI:5454876]
69. 1500002O10Rik 1500002O10Rik 17 0.817 - - 0.817 - - -
70. Asphd1 ENSMUSG00000046378 24 0.816 - - 0.816 - - - aspartate beta-hydroxylase domain containing 1 [Source:MGI Symbol;Acc:MGI:2685014]
71. Gm14019 ENSMUSG00000086913 9 0.816 - - 0.816 - - - predicted gene 14019 [Source:MGI Symbol;Acc:MGI:3651448]
72. Taf1a ENSMUSG00000072258 60 0.814 - - - - 0.814 - TATA-box binding protein associated factor, RNA polymerase I, A [Source:MGI Symbol;Acc:MGI:109578]
73. 4930524L23Rik 4930524L23Rik 18 0.814 - - 0.814 - - -
74. 6430531B16Rik ENSMUSG00000073795 11 0.812 - - 0.812 - - - RIKEN cDNA 6430531B16 gene [Source:MGI Symbol;Acc:MGI:2685939]
75. H2-T22 ENSMUSG00000056116 94 0.811 - - 0.811 - - - histocompatibility 2, T region locus 22 [Source:MGI Symbol;Acc:MGI:95956]
76. Rasgrp1 ENSMUSG00000027347 24 0.81 - - 0.810 - - - RAS guanyl releasing protein 1 [Source:MGI Symbol;Acc:MGI:1314635]
77. Hdac10 ENSMUSG00000062906 269 0.81 - - - - - 0.810 histone deacetylase 10 [Source:MGI Symbol;Acc:MGI:2158340]
78. Nell1 ENSMUSG00000055409 250 0.809 - - 0.809 - - - NEL-like 1 [Source:MGI Symbol;Acc:MGI:2443902]
79. 2210417K05Rik 2210417K05Rik 42 0.809 - - 0.809 - - -
80. Gjb3 ENSMUSG00000042367 57 0.808 - - 0.808 - - - gap junction protein, beta 3 [Source:MGI Symbol;Acc:MGI:95721]
81. Mical1 ENSMUSG00000019823 14 0.808 - - 0.808 - - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:MGI Symbol;Acc:MGI:2385847]
82. Gm10704 ENSMUSG00000074479 74 0.808 - - 0.808 - - - predicted pseudogene 10704 [Source:MGI Symbol;Acc:MGI:3642446]
83. Wfikkn2 ENSMUSG00000044177 30 0.805 - - 0.805 - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:MGI Symbol;Acc:MGI:2669209]
84. Fas ENSMUSG00000024778 40 0.805 - - 0.805 - - - Fas (TNF receptor superfamily member 6) [Source:MGI Symbol;Acc:MGI:95484]
85. Prima1 ENSMUSG00000041669 38 0.805 - - - - - 0.805 proline rich membrane anchor 1 [Source:MGI Symbol;Acc:MGI:1926097]
86. Rpl31-ps20 ENSMUSG00000058607 7 0.804 - - - - - 0.804 ribosomal protein L31, pseudogene 20 [Source:MGI Symbol;Acc:MGI:3644512]
87. Gm11830 ENSMUSG00000081490 5 0.804 - - 0.804 - - - predicted gene 11830 [Source:MGI Symbol;Acc:MGI:3649825]
88. Gm12463 ENSMUSG00000080916 11 0.803 - - - - - 0.803 predicted gene 12463 [Source:MGI Symbol;Acc:MGI:3650648]
89. Gm5844 ENSMUSG00000082896 73 0.801 - - - - - 0.801 predicted gene 5844 [Source:MGI Symbol;Acc:MGI:3645252]
90. Ccser1 ENSMUSG00000039578 59 0.797 - - 0.797 - - - coiled-coil serine rich 1 [Source:MGI Symbol;Acc:MGI:3045354]
91. Gm13267 ENSMUSG00000085818 65 0.796 - - 0.796 - - - predicted gene 13267 [Source:MGI Symbol;Acc:MGI:3652179]
92. Gyk Gyk 394 0.795 - - 0.795 - - -
93. 5830416P10Rik 5830416P10Rik 132 0.791 - - 0.791 - - -
94. Amigo3 ENSMUSG00000032593 29 0.791 - - 0.791 - - - adhesion molecule with Ig like domain 3 [Source:MGI Symbol;Acc:MGI:2444854]
95. Dlk2 ENSMUSG00000047428 25 0.791 - - 0.791 - - - delta like non-canonical Notch ligand 2 [Source:MGI Symbol;Acc:MGI:2146838]
96. Itpr3 ENSMUSG00000042644 184 0.791 - - - - - 0.791 inositol 1,4,5-triphosphate receptor 3 [Source:MGI Symbol;Acc:MGI:96624]
97. Gm26785 ENSMUSG00000097390 56 0.79 - - 0.790 - - - predicted gene, 26785 [Source:MGI Symbol;Acc:MGI:5477279]
98. Syngr4 ENSMUSG00000040231 19 0.789 - - - - - 0.789 synaptogyrin 4 [Source:MGI Symbol;Acc:MGI:1928903]
99. Gabrp ENSMUSG00000020159 21 0.789 - - 0.789 - - - gamma-aminobutyric acid (GABA) A receptor, pi [Source:MGI Symbol;Acc:MGI:2387597]
100. Gm6177 ENSMUSG00000057499 11 0.788 - - 0.788 - - - predicted gene 6177 [Source:MGI Symbol;Acc:MGI:3643753]

There are 178 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA