Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Npas4

Gene Name Gene ID Reads Annotation
Npas4 ENSMUSG00000045903 62 neuronal PAS domain protein 4 [Source:MGI Symbol;Acc:MGI:2664186]







Genes with expression patterns similar to Npas4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Npas4 ENSMUSG00000045903 62 6 1.000 1.000 1.000 1.000 1.000 1.000 neuronal PAS domain protein 4 [Source:MGI Symbol;Acc:MGI:2664186]
2. Gm14951 ENSMUSG00000084776 22 1.908 0.926 - 0.982 - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
3. Hcrtr2 ENSMUSG00000032360 19 0.984 - - 0.984 - - - hypocretin (orexin) receptor 2 [Source:MGI Symbol;Acc:MGI:2680765]
4. Fcna ENSMUSG00000026938 10 0.983 - - 0.983 - - - ficolin A [Source:MGI Symbol;Acc:MGI:1340905]
5. Gm25541 ENSMUSG00000080538 21 0.982 - - 0.982 - - - predicted gene, 25541 [Source:MGI Symbol;Acc:MGI:5455318]
6. 2310042E22Rik 2310042E22Rik 17 0.982 - - 0.982 - - -
7. Ugt3a2 ENSMUSG00000049152 5 0.982 - - 0.982 - - - UDP glycosyltransferases 3 family, polypeptide A2 [Source:MGI Symbol;Acc:MGI:2145969]
8. Prl8a6 ENSMUSG00000021345 4 0.982 - - 0.982 - - - prolactin family 8, subfamily a, member 6 [Source:MGI Symbol;Acc:MGI:1332225]
9. Gm20628 ENSMUSG00000093656 3 0.982 - - 0.982 - - - predicted gene 20628 [Source:MGI Symbol;Acc:MGI:5313075]
10. 1700057H21Rik ENSMUSG00000086007 2 0.982 - - 0.982 - - - RIKEN cDNA 1700057H21 gene [Source:MGI Symbol;Acc:MGI:1920625]
11. Gm11370 ENSMUSG00000081905 2 0.982 - - 0.982 - - - predicted gene 11370 [Source:MGI Symbol;Acc:MGI:3651832]
12. Dupd1 ENSMUSG00000063821 7 0.982 - - 0.982 - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:MGI Symbol;Acc:MGI:3647127]
13. Gm22257 ENSMUSG00000089312 2 0.982 - - 0.982 - - - predicted gene, 22257 [Source:MGI Symbol;Acc:MGI:5452034]
14. Gm12295 ENSMUSG00000085162 3 0.982 - - 0.982 - - - predicted gene 12295 [Source:MGI Symbol;Acc:MGI:3650535]
15. Gm773 ENSMUSG00000073177 2 0.982 - - 0.982 - - - predicted gene 773 [Source:MGI Symbol;Acc:MGI:2685619]
16. Pirb ENSMUSG00000058818 16 0.981 - - 0.981 - - - paired Ig-like receptor B [Source:MGI Symbol;Acc:MGI:894311]
17. Lrrc25 ENSMUSG00000049988 4 0.98 - - 0.980 - - - leucine rich repeat containing 25 [Source:MGI Symbol;Acc:MGI:2445284]
18. Gm7416 ENSMUSG00000084031 7 0.979 - - 0.979 - - - predicted gene 7416 [Source:MGI Symbol;Acc:MGI:3647901]
19. 9930013L23Rik 9930013L23Rik 21 0.978 - - 0.978 - - -
20. Gm25520 ENSMUSG00000089014 14 0.976 - - 0.976 - - - predicted gene, 25520 [Source:MGI Symbol;Acc:MGI:5455297]
21. Bmp5 ENSMUSG00000032179 12 0.973 - - 0.973 - - - bone morphogenetic protein 5 [Source:MGI Symbol;Acc:MGI:88181]
22. Cxcl1 ENSMUSG00000029380 4 0.972 - - 0.972 - - - chemokine (C-X-C motif) ligand 1 [Source:MGI Symbol;Acc:MGI:108068]
23. Slc11a1 ENSMUSG00000026177 34 0.971 - - 0.971 - - - solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 [Source:MGI Symbol;Acc:MGI:1345275]
24. Gm13056 ENSMUSG00000085395 13 0.971 - - 0.971 - - - predicted gene 13056 [Source:MGI Symbol;Acc:MGI:3650725]
25. Cngb1 ENSMUSG00000031789 4 0.97 - - 0.970 - - - cyclic nucleotide gated channel beta 1 [Source:MGI Symbol;Acc:MGI:2664102]
26. Hpgds ENSMUSG00000029919 68 0.97 - - 0.970 - - - hematopoietic prostaglandin D synthase [Source:MGI Symbol;Acc:MGI:1859384]
27. Gm25789 ENSMUSG00000065228 22 0.969 - - 0.969 - - - predicted gene, 25789 [Source:MGI Symbol;Acc:MGI:5455566]
28. Sprtn ENSMUSG00000031986 4 0.965 - - 0.965 - - - SprT-like N-terminal domain [Source:MGI Symbol;Acc:MGI:2685351]
29. Crhbp ENSMUSG00000021680 29 0.965 - - 0.965 - - - corticotropin releasing hormone binding protein [Source:MGI Symbol;Acc:MGI:88497]
30. Ptpn22 ENSMUSG00000027843 17 0.964 - - 0.964 - - - protein tyrosine phosphatase, non-receptor type 22 (lymphoid) [Source:MGI Symbol;Acc:MGI:107170]
31. Gm26771 ENSMUSG00000097250 8 0.961 - - 0.961 - - - predicted gene, 26771 [Source:MGI Symbol;Acc:MGI:5477265]
32. Gm15443 ENSMUSG00000082588 32 0.96 0.960 - - - - - predicted gene 15443 [Source:MGI Symbol;Acc:MGI:3642525]
33. Popdc3 ENSMUSG00000019848 48 0.957 - - 0.957 - - - popeye domain containing 3 [Source:MGI Symbol;Acc:MGI:1930153]
34. Gm26721 ENSMUSG00000096943 22 0.954 - - 0.954 - - - predicted gene, 26721 [Source:MGI Symbol;Acc:MGI:5477215]
35. RP24-325L16.1 RP24-325L16.1 31 0.954 - - 0.954 - - -
36. Gpr35 ENSMUSG00000026271 17 0.949 - - 0.949 - - - G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
37. Rasal3 ENSMUSG00000052142 7 0.949 - - 0.949 - - - RAS protein activator like 3 [Source:MGI Symbol;Acc:MGI:2444128]
38. Hmgb1-ps3 ENSMUSG00000081455 5 0.947 - - 0.947 - - - high mobility group box 1, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3768539]
39. Cox6b2 ENSMUSG00000051811 121 0.947 - - 0.947 - - - cytochrome c oxidase subunit 6B2 [Source:MGI Symbol;Acc:MGI:3044182]
40. Syt12 ENSMUSG00000049303 17 0.944 - - 0.944 - - - synaptotagmin XII [Source:MGI Symbol;Acc:MGI:2159601]
41. B3gnt9 ENSMUSG00000069920 24 0.942 - - 0.942 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:MGI Symbol;Acc:MGI:2142841]
42. Mettl21e ENSMUSG00000046828 7 0.941 - - 0.941 - - - methyltransferase like 21E [Source:MGI Symbol;Acc:MGI:2685837]
43. Pi4kb ENSMUSG00000038861 97 0.94 - - 0.940 - - - phosphatidylinositol 4-kinase beta [Source:MGI Symbol;Acc:MGI:1334433]
44. Gm20663 ENSMUSG00000093378 49 0.94 - - 0.940 - - - predicted gene 20663 [Source:MGI Symbol;Acc:MGI:5313110]
45. Nod2 ENSMUSG00000055994 12 0.938 - - 0.938 - - - nucleotide-binding oligomerization domain containing 2 [Source:MGI Symbol;Acc:MGI:2429397]
46. Gm13657 ENSMUSG00000086813 15 0.937 - - 0.937 - - - predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
47. Naglu ENSMUSG00000001751 142 0.935 0.935 - - - - - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) [Source:MGI Symbol;Acc:MGI:1351641]
48. Msc ENSMUSG00000025930 30 0.933 - - 0.933 - - - musculin [Source:MGI Symbol;Acc:MGI:1333884]
49. Lhx6 ENSMUSG00000026890 107 0.932 0.932 - - - - - LIM homeobox protein 6 [Source:MGI Symbol;Acc:MGI:1306803]
50. Gm4353 ENSMUSG00000091900 44 0.931 0.931 - - - - - predicted gene 4353 [Source:MGI Symbol;Acc:MGI:3782538]
51. Gm5073 ENSMUSG00000083140 19 0.931 0.931 - - - - - predicted pseudogene 5073 [Source:MGI Symbol;Acc:MGI:3643718]
52. Gm5697 ENSMUSG00000081557 24 0.931 0.931 - - - - - predicted gene 5697 [Source:MGI Symbol;Acc:MGI:3649021]
53. Gm4787 ENSMUSG00000072974 15 0.931 - - 0.931 - - - predicted gene 4787 [Source:MGI Symbol;Acc:MGI:3646380]
54. Gm27042 ENSMUSG00000097792 33 0.93 - - 0.930 - - - predicted gene, 27042 [Source:MGI Symbol;Acc:MGI:5504157]
55. Slc13a4 ENSMUSG00000029843 66 0.93 0.930 - - - - - solute carrier family 13 (sodium/sulfate symporters), member 4 [Source:MGI Symbol;Acc:MGI:2442367]
56. Gm11531 ENSMUSG00000075587 27 0.93 0.930 - - - - - predicted gene 11531 [Source:MGI Symbol;Acc:MGI:3650260]
57. Gm4217 ENSMUSG00000097954 30 0.929 0.929 - - - - - predicted gene 4217 [Source:MGI Symbol;Acc:MGI:3782393]
58. Lamp5 ENSMUSG00000027270 112 0.928 0.928 - - - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
59. A2m ENSMUSG00000030111 38 0.928 - - 0.928 - - - alpha-2-macroglobulin [Source:MGI Symbol;Acc:MGI:2449119]
60. Serpinb1b ENSMUSG00000051029 30 0.928 0.928 - - - - - serine (or cysteine) peptidase inhibitor, clade B, member 1b [Source:MGI Symbol;Acc:MGI:2445361]
61. Lama3 ENSMUSG00000024421 55 0.927 - - 0.927 - - - laminin, alpha 3 [Source:MGI Symbol;Acc:MGI:99909]
62. Tmigd1 ENSMUSG00000020839 18 0.926 - - 0.926 - - - transmembrane and immunoglobulin domain containing 1 [Source:MGI Symbol;Acc:MGI:1913851]
63. Smc1b ENSMUSG00000022432 39 0.925 0.925 - - - - - structural maintenance of chromosomes 1B [Source:MGI Symbol;Acc:MGI:2154049]
64. 4930441O14Rik 4930441O14Rik 43 0.925 0.925 - - - - -
65. Lrrc4b ENSMUSG00000047085 349 0.923 0.923 - - - - - leucine rich repeat containing 4B [Source:MGI Symbol;Acc:MGI:3027390]
66. Samd15 ENSMUSG00000090812 66 0.923 0.923 - - - - - sterile alpha motif domain containing 15 [Source:MGI Symbol;Acc:MGI:2685109]
67. 3010001F23Rik ENSMUSG00000084885 157 0.923 0.923 - - - - - RIKEN cDNA 3010001F23 gene [Source:MGI Symbol;Acc:MGI:1922943]
68. Fads3 ENSMUSG00000024664 192 0.923 0.923 - - - - - fatty acid desaturase 3 [Source:MGI Symbol;Acc:MGI:1928740]
69. Gabbr1 ENSMUSG00000024462 2045 0.921 0.921 - - - - - gamma-aminobutyric acid (GABA) B receptor, 1 [Source:MGI Symbol;Acc:MGI:1860139]
70. Gm11645 ENSMUSG00000080895 26 0.921 - - 0.921 - - - predicted gene 11645 [Source:MGI Symbol;Acc:MGI:3652133]
71. 4930570G19Rik ENSMUSG00000085084 34 0.92 - - 0.920 - - - RIKEN cDNA 4930570G19 gene [Source:MGI Symbol;Acc:MGI:1923158]
72. 2010015L04Rik 2010015L04Rik 37 0.919 - - 0.919 - - -
73. Nr3c1 ENSMUSG00000024431 672 0.918 0.918 - - - - - nuclear receptor subfamily 3, group C, member 1 [Source:MGI Symbol;Acc:MGI:95824]
74. Prl3b1 ENSMUSG00000038891 69 0.918 0.918 - - - - - prolactin family 3, subfamily b, member 1 [Source:MGI Symbol;Acc:MGI:97607]
75. Gm26659 ENSMUSG00000097609 40 0.917 0.917 - - - - - predicted gene, 26659 [Source:MGI Symbol;Acc:MGI:5477153]
76. Gm25072 ENSMUSG00000092974 251 0.916 0.916 - - - - - predicted gene, 25072 [Source:MGI Symbol;Acc:MGI:5454849]
77. E230001N04Rik ENSMUSG00000066170 39 0.915 - - 0.915 - - - RIKEN cDNA E230001N04 gene [Source:MGI Symbol;Acc:MGI:2443549]
78. Ms4a6d ENSMUSG00000024679 33 0.915 - - 0.915 - - - membrane-spanning 4-domains, subfamily A, member 6D [Source:MGI Symbol;Acc:MGI:1916024]
79. Slc17a9 ENSMUSG00000023393 165 0.915 0.915 - - - - - solute carrier family 17, member 9 [Source:MGI Symbol;Acc:MGI:1919107]
80. Ceacam1 ENSMUSG00000074272 190 0.914 0.914 - - - - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1347245]
81. Lrrc27 ENSMUSG00000015980, ENSMUSG00000111011 83 0.913 0.913 - - - - - leucine rich repeat containing 27 [Source:MGI Symbol;Acc:MGI:1923862]
82. Ripk3 ENSMUSG00000022221 346 0.911 0.911 - - - - - receptor-interacting serine-threonine kinase 3 [Source:MGI Symbol;Acc:MGI:2154952]
83. Tnnt1 ENSMUSG00000064179 836 0.911 0.911 - - - - - troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]
84. Lurap1l ENSMUSG00000048706 165 0.909 0.909 - - - - - leucine rich adaptor protein 1-like [Source:MGI Symbol;Acc:MGI:106510]
85. Gm11496 ENSMUSG00000085152 340 0.909 0.909 - - - - - predicted gene 11496 [Source:MGI Symbol;Acc:MGI:3649410]
86. Thg1l ENSMUSG00000011254 324 0.908 0.908 - - - - - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913878]
87. Ogfrl1 ENSMUSG00000026158 1984 0.907 0.907 - - - - - opioid growth factor receptor-like 1 [Source:MGI Symbol;Acc:MGI:1917405]
88. Rasl12 ENSMUSG00000041696 228 0.907 0.907 - - - - - RAS-like, family 12 [Source:MGI Symbol;Acc:MGI:1918034]
89. Tgm5 ENSMUSG00000053675 23 0.907 - - 0.907 - - - transglutaminase 5 [Source:MGI Symbol;Acc:MGI:1921426]
90. Cd68 ENSMUSG00000018774 174 0.907 0.907 - - - - - CD68 antigen [Source:MGI Symbol;Acc:MGI:88342]
91. Gm15530 ENSMUSG00000081651 13 0.903 - - 0.903 - - - predicted gene 15530 [Source:MGI Symbol;Acc:MGI:3782978]
92. Thap1 ENSMUSG00000037214 256 0.903 - - 0.903 - - - THAP domain containing, apoptosis associated protein 1 [Source:MGI Symbol;Acc:MGI:1921004]
93. Itpripl2 ENSMUSG00000095115 287 0.903 0.903 - - - - - inositol 1,4,5-triphosphate receptor interacting protein-like 2 [Source:MGI Symbol;Acc:MGI:2442416]
94. Gm5898 ENSMUSG00000081788 45 0.902 - - 0.902 - - - predicted gene 5898 [Source:MGI Symbol;Acc:MGI:3644921]
95. Cdh9 ENSMUSG00000025370 9 0.902 - - 0.902 - - - cadherin 9 [Source:MGI Symbol;Acc:MGI:107433]
96. 1700029I15Rik ENSMUSG00000044916 21 0.902 - - 0.902 - - - RIKEN cDNA 1700029I15 gene [Source:MGI Symbol;Acc:MGI:1916742]
97. E330009J07Rik ENSMUSG00000037172 461 0.9 0.900 - - - - - RIKEN cDNA E330009J07 gene [Source:MGI Symbol;Acc:MGI:2444256]
98. 4632404H12Rik ENSMUSG00000042579 118 0.9 0.900 - - - - - RIKEN cDNA 4632404H12 gene [Source:MGI Symbol;Acc:MGI:1921284]
99. Gm9776 ENSMUSG00000042857 174 0.899 0.899 - - - - - predicted gene 9776 [Source:MGI Symbol;Acc:MGI:3641792]
100. Actl6a ENSMUSG00000027671 174 0.898 0.898 - - - - - actin-like 6A [Source:MGI Symbol;Acc:MGI:1861453]

There are 314 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA