Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Npas3

Gene Name Gene ID Reads Annotation
Npas3 ENSMUSG00000021010 2049 neuronal PAS domain protein 3 [Source:MGI Symbol;Acc:MGI:1351610]







Genes with expression patterns similar to Npas3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Npas3 ENSMUSG00000021010 2049 6 1.000 1.000 1.000 1.000 1.000 1.000 neuronal PAS domain protein 3 [Source:MGI Symbol;Acc:MGI:1351610]
2. Draxin ENSMUSG00000029005 726 2.2 - - 0.715 0.739 0.746 - dorsal inhibitory axon guidance protein [Source:MGI Symbol;Acc:MGI:1917683]
3. Phf21b ENSMUSG00000016624 849 2.198 0.733 - - 0.714 - 0.751 PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
4. Miat ENSMUSG00000097767 4258 2.153 - - - 0.738 0.712 0.703 myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
5. Btbd9 ENSMUSG00000062202 1289 1.648 - 0.914 - - 0.734 - BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
6. Zic4 ENSMUSG00000036972 1968 1.639 - - - 0.774 - 0.865 zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
7. Mkrn1 ENSMUSG00000029922 1839 1.604 - 0.900 0.704 - - - makorin, ring finger protein, 1 [Source:MGI Symbol;Acc:MGI:1859353]
8. Zic1 ENSMUSG00000032368 7734 1.579 - - - 0.729 - 0.850 zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
9. Hoxb9 ENSMUSG00000020875 2764 1.558 0.749 - - 0.809 - - homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
10. Pea15a ENSMUSG00000013698 6011 1.532 - 0.781 0.751 - - - phosphoprotein enriched in astrocytes 15A [Source:MGI Symbol;Acc:MGI:104799]
11. Fzd10 ENSMUSG00000081683 998 1.522 - - - 0.745 - 0.777 frizzled class receptor 10 [Source:MGI Symbol;Acc:MGI:2136761]
12. Jam2 ENSMUSG00000053062 1020 1.522 - - - 0.800 0.722 - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
13. Sox2 ENSMUSG00000074637 8409 1.518 0.732 - - 0.786 - - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
14. Pou3f2 ENSMUSG00000095139 2416 1.514 0.743 - - 0.771 - - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
15. C130071C03Rik ENSMUSG00000050334 1582 1.507 - - 0.745 0.762 - - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
16. Dll3 ENSMUSG00000003436 1086 1.504 - - - 0.763 0.741 - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
17. Dcc ENSMUSG00000060534 107 1.484 0.706 - - 0.778 - - deleted in colorectal carcinoma [Source:MGI Symbol;Acc:MGI:94869]
18. Pou3f3 ENSMUSG00000045515 5137 1.45 - - - 0.712 - 0.738 POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
19. Hoxc6 ENSMUSG00000001661 9818 1.431 - - - 0.703 - 0.728 homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
20. Fxr2 ENSMUSG00000018765 1650 0.922 - 0.922 - - - - fragile X mental retardation, autosomal homolog 2 [Source:MGI Symbol;Acc:MGI:1346074]
21. Cxxc4 ENSMUSG00000044365 723 0.921 - 0.921 - - - - CXXC finger 4 [Source:MGI Symbol;Acc:MGI:2442112]
22. Slc38a3 ENSMUSG00000010064 147 0.916 - 0.916 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
23. Apoo ENSMUSG00000079508 815 0.915 - 0.915 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
24. Pom121 ENSMUSG00000053293 574 0.914 - 0.914 - - - - nuclear pore membrane protein 121 [Source:MGI Symbol;Acc:MGI:2137624]
25. 2010111I01Rik ENSMUSG00000021458 591 0.912 - 0.912 - - - - RIKEN cDNA 2010111I01 gene [Source:MGI Symbol;Acc:MGI:1919311]
26. 0610009B22Rik ENSMUSG00000007777 752 0.912 - 0.912 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
27. Gm25735 ENSMUSG00000092905 617 0.912 - 0.912 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
28. Smpd3 ENSMUSG00000031906 194 0.91 - 0.910 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
29. Ppp4r4 ENSMUSG00000021209 242 0.908 - 0.908 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
30. Klhl6 ENSMUSG00000043008 952 0.908 - 0.908 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
31. Cetn4 ENSMUSG00000045031 377 0.907 - 0.907 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
32. Gm5776 ENSMUSG00000099647 589 0.905 - 0.905 - - - - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
33. Kcnk5 ENSMUSG00000023243 191 0.904 - 0.904 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
34. Zbtb12 ENSMUSG00000049823 373 0.904 - 0.904 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
35. Tmem246 ENSMUSG00000039611 866 0.904 - 0.904 - - - - transmembrane protein 246 [Source:MGI Symbol;Acc:MGI:1914313]
36. Lonp2 ENSMUSG00000047866 1312 0.904 - 0.904 - - - - lon peptidase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1914137]
37. Larp7 ENSMUSG00000027968 2270 0.903 - 0.903 - - - - La ribonucleoprotein domain family, member 7 [Source:MGI Symbol;Acc:MGI:107634]
38. Ptges3l ENSMUSG00000097487 146 0.903 - 0.903 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
39. Atg3 ENSMUSG00000022663 1323 0.903 - 0.903 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]
40. Gm26782 ENSMUSG00000097431 428 0.902 - 0.902 - - - - predicted gene, 26782 [Source:MGI Symbol;Acc:MGI:5477276]
41. Zfp71-rs1 Zfp71-rs1 629 0.902 - 0.902 - - - -
42. Cyp27a1 ENSMUSG00000026170 153 0.901 - 0.901 - - - - cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
43. Cd302 ENSMUSG00000060703 214 0.901 - 0.901 - - - - CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
44. Pdpr ENSMUSG00000033624 123 0.901 - 0.901 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:MGI Symbol;Acc:MGI:2442188]
45. Ap2a1 ENSMUSG00000060279 108 0.901 - 0.901 - - - - adaptor-related protein complex 2, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:101921]
46. Usp35 ENSMUSG00000035713 112 0.901 - 0.901 - - - - ubiquitin specific peptidase 35 [Source:MGI Symbol;Acc:MGI:2685339]
47. Ing2 ENSMUSG00000063049 913 0.901 - 0.901 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
48. Extl1 ENSMUSG00000028838 63 0.901 - 0.901 - - - - exostoses (multiple)-like 1 [Source:MGI Symbol;Acc:MGI:1888742]
49. Lnp 1121 0.9 - 0.900 - - - - limb and neural patterns, transcript variant X4
50. Suclg2 ENSMUSG00000061838 465 0.9 - 0.900 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
51. Smim4 ENSMUSG00000058351 454 0.9 - 0.900 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
52. Trim8 ENSMUSG00000025034 1494 0.9 - 0.900 - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]
53. Rpl27-ps2 ENSMUSG00000082171 89 0.9 - 0.900 - - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
54. Plekhm1 ENSMUSG00000034247 251 0.9 - 0.900 - - - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
55. Tmem126b ENSMUSG00000030614 743 0.899 - 0.899 - - - - transmembrane protein 126B [Source:MGI Symbol;Acc:MGI:1915722]
56. Tmem135 ENSMUSG00000039428 946 0.899 - 0.899 - - - - transmembrane protein 135 [Source:MGI Symbol;Acc:MGI:1920009]
57. Rab11fip5 ENSMUSG00000051343 496 0.899 - 0.899 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
58. Gm9790 ENSMUSG00000044330 390 0.899 - 0.899 - - - - predicted gene 9790 [Source:MGI Symbol;Acc:MGI:3704221]
59. Zfp865 ENSMUSG00000074405 1223 0.898 - 0.898 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
60. AK129341 AK129341 204 0.898 - 0.898 - - - -
61. Pla2g15 ENSMUSG00000031903 321 0.898 - 0.898 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
62. Gm4944 968 0.897 - 0.897 - - - - predicted gene 4944
63. Usp36 ENSMUSG00000033909 2464 0.897 - 0.897 - - - - ubiquitin specific peptidase 36 [Source:MGI Symbol;Acc:MGI:1919594]
64. Tmem186 ENSMUSG00000043140 711 0.897 - 0.897 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
65. Tmem80 ENSMUSG00000025505 1620 0.897 - 0.897 - - - - transmembrane protein 80 [Source:MGI Symbol;Acc:MGI:1918698]
66. Cars2 ENSMUSG00000056228 492 0.896 - 0.896 - - - - cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:1919191]
67. Rbm12b1 ENSMUSG00000046667 331 0.896 - 0.896 - - - - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
68. Map1a ENSMUSG00000027254 1223 0.895 - 0.895 - - - - microtubule-associated protein 1 A [Source:MGI Symbol;Acc:MGI:1306776]
69. Gm25734 Gm25734 104 0.895 - 0.895 - - - -
70. Bckdha ENSMUSG00000060376 653 0.895 - 0.895 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
71. Sik2 ENSMUSG00000037112 1369 0.894 - 0.894 - - - - salt inducible kinase 2 [Source:MGI Symbol;Acc:MGI:2445031]
72. Gm26981 ENSMUSG00000098041 717 0.893 - 0.893 - - - - predicted gene, 26981 [Source:MGI Symbol;Acc:MGI:5504096]
73. Zfp11 ENSMUSG00000051034 218 0.893 - 0.893 - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
74. 9930021J03Rik ENSMUSG00000046138 2964 0.892 - 0.892 - - - - RIKEN cDNA 9930021J03 gene [Source:MGI Symbol;Acc:MGI:2444398]
75. Gatad2b ENSMUSG00000042390 1312 0.892 - 0.892 - - - - GATA zinc finger domain containing 2B [Source:MGI Symbol;Acc:MGI:2443225]
76. Gmds ENSMUSG00000038372 653 0.891 - 0.891 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
77. Tmem26 ENSMUSG00000060044 379 0.891 - 0.891 - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
78. Ndufb4 ENSMUSG00000022820 1605 0.891 - 0.891 - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:MGI Symbol;Acc:MGI:1915444]
79. Tmcc1 ENSMUSG00000030126 2753 0.89 - 0.890 - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
80. Pabpc4l ENSMUSG00000090919 1259 0.89 - 0.890 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
81. Sh3glb2 ENSMUSG00000026860 1046 0.89 - 0.890 - - - - SH3-domain GRB2-like endophilin B2 [Source:MGI Symbol;Acc:MGI:2385131]
82. Dhx34 ENSMUSG00000006019 240 0.889 - 0.889 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
83. Mcc ENSMUSG00000071856 4024 0.889 - 0.889 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
84. Harbi1 ENSMUSG00000027243 348 0.889 - 0.889 - - - - harbinger transposase derived 1 [Source:MGI Symbol;Acc:MGI:2443194]
85. Hist1h3c ENSMUSG00000069310 508 0.889 - 0.889 - - - - histone cluster 1, H3c [Source:MGI Symbol;Acc:MGI:2448320]
86. Fam57a ENSMUSG00000069808 616 0.889 - 0.889 - - - - family with sequence similarity 57, member A [Source:MGI Symbol;Acc:MGI:2151840]
87. Gmppa ENSMUSG00000033021 462 0.888 - 0.888 - - - - GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
88. Wdr46 ENSMUSG00000024312 449 0.888 - 0.888 - - - - WD repeat domain 46 [Source:MGI Symbol;Acc:MGI:1931871]
89. Gm12942 332 0.888 - 0.888 - - - - predicted gene 12942
90. Myadm ENSMUSG00000068566, ENSMUSG00000097829 710 0.887 - 0.887 - - - - myeloid-associated differentiation marker [Source:NCBI gene;Acc:50918]
91. Ccne1 ENSMUSG00000002068 2574 0.887 - 0.887 - - - - cyclin E1 [Source:MGI Symbol;Acc:MGI:88316]
92. Car8 ENSMUSG00000041261 286 0.886 - 0.886 - - - - carbonic anhydrase 8 [Source:MGI Symbol;Acc:MGI:88253]
93. Dact2 ENSMUSG00000048826 163 0.886 - 0.886 - - - - dishevelled-binding antagonist of beta-catenin 2 [Source:MGI Symbol;Acc:MGI:1920347]
94. Gm7327 ENSMUSG00000050900 249 0.885 - 0.885 - - - - predicted gene 7327 [Source:MGI Symbol;Acc:MGI:3646274]
95. Fbxo25 ENSMUSG00000038365 940 0.885 - 0.885 - - - - F-box protein 25 [Source:MGI Symbol;Acc:MGI:1914072]
96. Coa6 ENSMUSG00000051671 731 0.885 - 0.885 - - - - cytochrome c oxidase assembly factor 6 [Source:MGI Symbol;Acc:MGI:1915142]
97. Csrp2bp 1398 0.884 - 0.884 - - - - cysteine and glycine-rich protein 2 binding protein, transcript variant 1
98. Uvrag ENSMUSG00000035354 908 0.884 - 0.884 - - - - UV radiation resistance associated gene [Source:MGI Symbol;Acc:MGI:1925860]
99. Mical2 ENSMUSG00000038244 295 0.884 - 0.884 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:MGI Symbol;Acc:MGI:2444947]
100. Aldh6a1 ENSMUSG00000021238 522 0.884 - 0.884 - - - - aldehyde dehydrogenase family 6, subfamily A1 [Source:MGI Symbol;Acc:MGI:1915077]

There are 329 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA