Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Nhlh1

Gene Name Gene ID Reads Annotation
Nhlh1 ENSMUSG00000051251 2017 nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]







Genes with expression patterns similar to Nhlh1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Nhlh1 ENSMUSG00000051251 2017 6 1.000 1.000 1.000 1.000 1.000 1.000 nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
2. Srgap3 ENSMUSG00000030257 2941 4.889 0.870 0.859 0.851 0.770 0.794 0.745 SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
3. Tubb3 ENSMUSG00000062380 9211 4.861 0.912 0.832 0.708 0.889 0.737 0.783 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
4. Nhlh2 ENSMUSG00000048540 1310 4.764 0.783 0.794 0.755 0.858 0.798 0.776 nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
5. Elavl4 ENSMUSG00000028546 6084 4.13 - 0.825 0.806 0.877 0.808 0.814 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
6. Myt1 ENSMUSG00000010505 661 3.888 0.769 0.716 0.857 0.793 - 0.753 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
7. Rhbdl3 ENSMUSG00000017692 783 3.839 0.717 0.758 0.884 0.734 - 0.746 rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
8. Neurod4 ENSMUSG00000048015 764 3.835 0.865 0.740 0.723 0.803 - 0.704 neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
9. 2610017I09Rik 2610017I09Rik 1595 3.83 0.782 - 0.806 0.808 0.717 0.717
10. Gpr98 Gpr98 1797 3.686 0.736 0.705 0.734 0.801 0.710 -
11. Trp53i11 ENSMUSG00000068735 15944 3.42 0.836 0.836 0.862 0.886 - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
12. Elavl3 ENSMUSG00000003410 2830 3.384 0.896 - 0.900 0.812 0.776 - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
13. Scg3 ENSMUSG00000032181 445 3.263 0.771 0.835 0.877 0.780 - - secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
14. Grm2 ENSMUSG00000023192 147 3.257 0.817 - 0.825 0.843 - 0.772 glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
15. Map2 ENSMUSG00000015222 2576 3.188 0.831 0.798 0.828 0.731 - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
16. Neurod1 ENSMUSG00000034701 1390 3.177 0.819 - - 0.799 0.752 0.807 neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
17. Ppp1r17 ENSMUSG00000002930 374 3.166 0.766 - 0.806 0.855 - 0.739 protein phosphatase 1, regulatory subunit 17 [Source:MGI Symbol;Acc:MGI:1333876]
18. Dcx ENSMUSG00000031285 1733 3.164 0.838 0.792 0.805 - - 0.729 doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
19. Ckb ENSMUSG00000001270 8443 3.149 0.779 0.721 0.856 0.793 - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
20. Prmt8 ENSMUSG00000030350 342 3.143 0.842 0.758 - 0.832 0.711 - protein arginine N-methyltransferase 8 [Source:MGI Symbol;Acc:MGI:3043083]
21. Tagln3 ENSMUSG00000022658 6054 3.137 - 0.751 0.859 0.794 - 0.733 transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
22. Apba2 ENSMUSG00000030519 840 3.13 0.884 0.778 0.756 - - 0.712 amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
23. Gng3 ENSMUSG00000071658 2104 3.123 0.760 - - 0.795 0.776 0.792 guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
24. Pax6 ENSMUSG00000027168 2751 3.112 0.730 - - 0.888 0.754 0.740 paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
25. Fam171b ENSMUSG00000048388 2388 3.101 0.849 0.740 - 0.783 0.729 - family with sequence similarity 171, member B [Source:MGI Symbol;Acc:MGI:2444579]
26. Btbd17 ENSMUSG00000000202 565 3.095 0.772 0.747 0.842 - 0.734 - BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
27. Rtn1 ENSMUSG00000021087 2547 3.07 0.802 0.743 0.778 0.747 - - reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
28. Rundc3a ENSMUSG00000006575 421 3.049 0.723 0.746 - 0.768 - 0.812 RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
29. Hes5 ENSMUSG00000048001 1640 3.044 - - 0.708 0.823 0.786 0.727 hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
30. Elavl2 ENSMUSG00000008489 2109 3.01 0.835 0.721 - 0.745 - 0.709 ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
31. Mllt11 ENSMUSG00000053192 1776 2.961 0.701 0.758 0.780 0.722 - - myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
32. Tubb2b ENSMUSG00000045136 41060 2.488 - - 0.912 0.836 - 0.740 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
33. St18 ENSMUSG00000033740 408 2.439 0.848 - 0.810 - 0.781 - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
34. Cadm1 ENSMUSG00000032076 15203 2.419 - 0.739 - 0.826 0.854 - cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
35. RP24-312G4.2 RP24-312G4.2 350 2.394 - - - 0.818 0.768 0.808
36. Sox2ot ENSMUSG00000105265 475 2.391 0.733 0.741 0.917 - - - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
37. Dpysl5 ENSMUSG00000029168 2096 2.386 0.844 - 0.833 0.709 - - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
38. Ebf1 ENSMUSG00000057098 3112 2.379 0.743 - - 0.881 0.755 - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
39. Tmsb4x ENSMUSG00000049775 61014 2.364 0.726 - - 0.866 - 0.772 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
40. Ap3b2 ENSMUSG00000062444 565 2.355 0.712 - 0.882 0.761 - - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
41. Fez1 ENSMUSG00000032118 2537 2.319 - - 0.793 0.794 - 0.732 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
42. Cntn2 ENSMUSG00000053024 1798 2.306 - - 0.726 0.849 - 0.731 contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
43. Nrarp ENSMUSG00000078202 1708 2.301 0.751 - 0.717 0.833 - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
44. Ncan ENSMUSG00000002341 521 2.296 0.711 - 0.855 0.730 - - neurocan [Source:MGI Symbol;Acc:MGI:104694]
45. Syt13 ENSMUSG00000027220 679 2.28 - 0.719 - 0.820 0.741 - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
46. Pou3f3 ENSMUSG00000045515 5137 2.276 - 0.786 0.746 0.744 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
47. Ppp1r1c ENSMUSG00000034683 286 2.267 - - - 0.798 0.756 0.713 protein phosphatase 1, regulatory inhibitor subunit 1C [Source:MGI Symbol;Acc:MGI:1923185]
48. Dll3 ENSMUSG00000003436 1086 2.264 0.727 0.803 0.734 - - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
49. Miat ENSMUSG00000097767 4258 2.255 - - 0.742 0.798 - 0.715 myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
50. Sox2 ENSMUSG00000074637 8409 2.24 - 0.727 0.742 0.771 - - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
51. Foxb1 ENSMUSG00000059246 293 2.232 0.759 0.717 0.756 - - - forkhead box B1 [Source:MGI Symbol;Acc:MGI:1927549]
52. Spsb4 ENSMUSG00000046997 5432 2.213 0.734 - 0.714 0.765 - - splA/ryanodine receptor domain and SOCS box containing 4 [Source:MGI Symbol;Acc:MGI:2183445]
53. Ednrb ENSMUSG00000022122 1909 2.169 0.718 0.722 - 0.729 - - endothelin receptor type B [Source:MGI Symbol;Acc:MGI:102720]
54. Fgfbp3 ENSMUSG00000047632 2036 1.763 0.897 - 0.866 - - - fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
55. Map1b ENSMUSG00000052727 28977 1.685 - - 0.857 0.828 - - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
56. 1700106J16Rik 1700106J16Rik 331 1.649 0.785 - 0.864 - - -
57. Soga3 ENSMUSG00000038916 3972 1.649 - - 0.834 0.815 - - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
58. Tuba1a ENSMUSG00000072235 51129 1.636 - - 0.797 0.839 - - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
59. Celsr2 ENSMUSG00000068740 2010 1.628 - - 0.882 - - 0.746 cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
60. Spock2 ENSMUSG00000058297 1096 1.621 0.775 - 0.846 - - - sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
61. Cadps ENSMUSG00000054423 870 1.619 0.853 - - 0.766 - - Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
62. Rgma ENSMUSG00000070509 1952 1.588 0.824 - 0.764 - - - repulsive guidance molecule family member A [Source:MGI Symbol;Acc:MGI:2679262]
63. Uchl1 ENSMUSG00000029223 2803 1.581 - 0.767 0.814 - - - ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
64. Stmn3 ENSMUSG00000027581 1327 1.574 0.782 - 0.792 - - - stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
65. Trim2 ENSMUSG00000027993 3587 1.57 - - - 0.844 - 0.726 tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
66. Nell2 ENSMUSG00000022454 870 1.566 - 0.779 0.787 - - - NEL-like 2 [Source:MGI Symbol;Acc:MGI:1858510]
67. Phf21b ENSMUSG00000016624 849 1.562 - - 0.760 0.802 - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
68. Kbtbd11 ENSMUSG00000055675 1156 1.548 0.772 - 0.776 - - - kelch repeat and BTB (POZ) domain containing 11 [Source:MGI Symbol;Acc:MGI:1922151]
69. Nmnat2 ENSMUSG00000042751 205 1.542 0.715 - 0.827 - - - nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
70. Tlx3 ENSMUSG00000040610 161 1.537 - - - 0.753 - 0.784 T cell leukemia, homeobox 3 [Source:MGI Symbol;Acc:MGI:1351209]
71. Cotl1 ENSMUSG00000031827 4560 1.535 0.758 - 0.777 - - - coactosin-like 1 (Dictyostelium) [Source:MGI Symbol;Acc:MGI:1919292]
72. Gm3764 ENSMUSG00000097156 474 1.533 - - - 0.767 0.766 - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
73. Scrt1 ENSMUSG00000048385 155 1.533 - - 0.784 - 0.749 - scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
74. Sst ENSMUSG00000004366 517 1.532 - - - 0.797 - 0.735 somatostatin [Source:MGI Symbol;Acc:MGI:98326]
75. Pgpep1 ENSMUSG00000056204 2455 1.52 0.715 - - 0.805 - - pyroglutamyl-peptidase I [Source:MGI Symbol;Acc:MGI:1913772]
76. Cdk5r1 ENSMUSG00000048895 2376 1.52 - - 0.798 0.722 - - cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
77. Rbfox3 ENSMUSG00000025576 384 1.515 - - 0.808 - - 0.707 RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
78. Enc1 ENSMUSG00000041773 2185 1.512 - - 0.760 0.752 - - ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
79. Ttyh1 ENSMUSG00000030428 279 1.507 - - 0.767 0.740 - - tweety family member 1 [Source:MGI Symbol;Acc:MGI:1889007]
80. 9330159F19Rik ENSMUSG00000004360 464 1.499 0.781 - - - - 0.718 RIKEN cDNA 9330159F19 gene [Source:MGI Symbol;Acc:MGI:3036239]
81. Btg2 ENSMUSG00000020423 1222 1.493 0.735 - - 0.758 - - B cell translocation gene 2, anti-proliferative [Source:MGI Symbol;Acc:MGI:108384]
82. Neurog2 ENSMUSG00000027967 670 1.493 - 0.713 0.780 - - - neurogenin 2 [Source:MGI Symbol;Acc:MGI:109619]
83. Tbc1d9 ENSMUSG00000031709 688 1.492 0.741 - - 0.751 - - TBC1 domain family, member 9 [Source:MGI Symbol;Acc:MGI:1918560]
84. D930028M14Rik ENSMUSG00000074274 452 1.49 - 0.740 - - - 0.750 RIKEN cDNA D930028M14 gene [Source:MGI Symbol;Acc:MGI:3687343]
85. Srrm4 ENSMUSG00000063919 190 1.489 - - 0.718 - - 0.771 serine/arginine repetitive matrix 4 [Source:MGI Symbol;Acc:MGI:1916205]
86. Glra1 ENSMUSG00000000263 586 1.489 - 0.708 0.781 - - - glycine receptor, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:95747]
87. Lhx1 ENSMUSG00000018698 512 1.486 - - - 0.785 0.701 - LIM homeobox protein 1 [Source:MGI Symbol;Acc:MGI:99783]
88. Phyhipl ENSMUSG00000037747 636 1.486 - - - 0.747 - 0.739 phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
89. Rgs4 ENSMUSG00000038530 539 1.484 - - - 0.781 0.703 - regulator of G-protein signaling 4 [Source:MGI Symbol;Acc:MGI:108409]
90. Nefl ENSMUSG00000022055 4031 1.481 0.770 - 0.711 - - - neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
91. Stmn2 ENSMUSG00000027500 6200 1.481 0.740 - 0.741 - - - stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
92. Ina ENSMUSG00000034336 3835 1.475 0.732 - 0.743 - - - internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
93. Nefm ENSMUSG00000022054 2534 1.473 0.771 - 0.702 - - - neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
94. Sox3 ENSMUSG00000045179 1137 1.471 0.742 - 0.729 - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
95. Disp2 ENSMUSG00000040035 230 1.47 0.701 - 0.769 - - - dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
96. Pou3f2 ENSMUSG00000095139 2416 1.469 - - 0.707 0.762 - - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
97. Zic1 ENSMUSG00000032368 7734 1.467 - - - 0.727 - 0.740 zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
98. Shox2 ENSMUSG00000027833 200 1.447 - - - 0.746 0.701 - short stature homeobox 2 [Source:MGI Symbol;Acc:MGI:1201673]
99. Nsg2 ENSMUSG00000020297 1718 1.44 0.714 - 0.726 - - - neuron specific gene family member 2 [Source:MGI Symbol;Acc:MGI:1202070]
100. Crmp1 ENSMUSG00000029121 3165 1.438 - - 0.724 0.714 - - collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]

There are 147 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA