Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Nefm

Gene Name Gene ID Reads Annotation
Nefm ENSMUSG00000022054 2534 neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]







Genes with expression patterns similar to Nefm

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Nefm ENSMUSG00000022054 2534 6 1.000 1.000 1.000 1.000 1.000 1.000 neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
2. Nefl ENSMUSG00000022055 4031 5.459 0.945 0.898 0.916 0.839 0.914 0.947 neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
3. Stmn2 ENSMUSG00000027500 6200 5.202 0.885 0.893 0.843 0.751 0.903 0.927 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
4. Ina ENSMUSG00000034336 3835 5.077 0.941 0.869 0.899 0.725 0.840 0.803 internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
5. Rtn1 ENSMUSG00000021087 2547 5.073 0.844 0.815 0.839 0.746 0.924 0.905 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
6. Dcx ENSMUSG00000031285 1733 5.027 0.904 0.874 0.857 0.742 0.879 0.771 doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
7. Cadps ENSMUSG00000054423 870 4.895 0.805 0.847 0.862 0.706 0.801 0.874 Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
8. Stmn3 ENSMUSG00000027581 1327 4.228 0.872 0.785 0.789 - 0.869 0.913 stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
9. Rufy3 ENSMUSG00000029291 695 4.218 0.848 0.788 0.789 - 0.897 0.896 RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
10. Tubb3 ENSMUSG00000062380 9211 4.168 0.858 0.879 0.832 - 0.811 0.788 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
11. Mllt11 ENSMUSG00000053192 1776 4.146 0.839 0.850 0.715 - 0.870 0.872 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
12. Gap43 ENSMUSG00000047261 5946 4.119 - 0.811 0.775 0.709 0.908 0.916 growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
13. Gng3 ENSMUSG00000071658 2104 4.035 0.834 - 0.850 0.707 0.774 0.870 guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
14. Actl6b ENSMUSG00000029712 203 3.967 - 0.831 0.733 0.706 0.847 0.850 actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
15. Myt1 ENSMUSG00000010505 661 3.944 0.795 0.820 0.874 - 0.706 0.749 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
16. Slc10a4 ENSMUSG00000029219 550 3.938 0.734 0.864 0.834 - 0.746 0.760 solute carrier family 10 (sodium/bile acid cotransporter family), member 4 [Source:MGI Symbol;Acc:MGI:3606480]
17. Nmnat2 ENSMUSG00000042751 205 3.934 0.791 - 0.718 0.701 0.823 0.901 nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
18. Elavl2 ENSMUSG00000008489 2109 3.871 0.768 0.851 - 0.710 0.749 0.793 ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
19. Lhx3 ENSMUSG00000026934 117 3.844 0.791 0.840 0.712 - 0.710 0.791 LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
20. Mapt ENSMUSG00000018411 1834 3.426 0.851 - 0.852 - 0.841 0.882 microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
21. Elavl4 ENSMUSG00000028546 6084 3.362 - 0.885 0.813 - 0.822 0.842 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
22. Sncg ENSMUSG00000023064 1702 3.306 - 0.880 - 0.717 0.845 0.864 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
23. Crmp1 ENSMUSG00000029121 3165 3.26 - 0.760 0.829 - 0.811 0.860 collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
24. Cdk5r1 ENSMUSG00000048895 2376 3.246 0.764 - 0.746 - 0.841 0.895 cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
25. Sp8 ENSMUSG00000048562 219 3.243 0.767 - 0.741 - 0.840 0.895 trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
26. Lhx4 ENSMUSG00000026468 214 3.226 0.883 0.862 0.762 - - 0.719 LIM homeobox protein 4 [Source:MGI Symbol;Acc:MGI:101776]
27. Elavl3 ENSMUSG00000003410 2830 3.199 0.876 0.714 0.831 - 0.778 - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
28. Nyap2 ENSMUSG00000054976 115 3.193 0.853 0.814 - - 0.743 0.783 neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 [Source:MGI Symbol;Acc:MGI:2443135]
29. Rbfox3 ENSMUSG00000025576 384 3.166 - 0.801 0.760 - 0.762 0.843 RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
30. Uts2b ENSMUSG00000056423 294 3.155 0.867 0.740 0.749 - - 0.799 urotensin 2B [Source:MGI Symbol;Acc:MGI:2677064]
31. Arhgap36 ENSMUSG00000036198 404 3.148 0.849 0.792 0.757 - - 0.750 Rho GTPase activating protein 36 [Source:MGI Symbol;Acc:MGI:1922654]
32. Neurod4 ENSMUSG00000048015 764 3.107 0.875 0.769 0.703 - - 0.760 neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
33. Kif5a ENSMUSG00000074657 425 3.102 - 0.773 0.776 - 0.762 0.791 kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
34. Tagln3 ENSMUSG00000022658 6054 3.088 - 0.765 0.803 - 0.738 0.782 transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
35. Scg3 ENSMUSG00000032181 445 3.036 - 0.718 0.780 - 0.806 0.732 secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
36. Uchl1 ENSMUSG00000029223 2803 2.486 - - 0.774 - 0.824 0.888 ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
37. L1cam ENSMUSG00000031391 813 2.478 - - 0.761 - 0.861 0.856 L1 cell adhesion molecule [Source:MGI Symbol;Acc:MGI:96721]
38. Kif5c ENSMUSG00000026764 1283 2.442 - - 0.747 - 0.858 0.837 kinesin family member 5C [Source:MGI Symbol;Acc:MGI:1098269]
39. St18 ENSMUSG00000033740 408 2.434 0.914 0.729 0.791 - - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
40. Dpysl5 ENSMUSG00000029168 2096 2.42 0.756 - 0.822 - 0.842 - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
41. Isl2 ENSMUSG00000032318 488 2.395 0.843 0.811 - - 0.741 - insulin related protein 2 (islet 2) [Source:MGI Symbol;Acc:MGI:109156]
42. Dpysl3 ENSMUSG00000024501 7004 2.375 - - 0.712 - 0.839 0.824 dihydropyrimidinase-like 3 [Source:MGI Symbol;Acc:MGI:1349762]
43. Nhlh2 ENSMUSG00000048540 1310 2.363 0.815 0.769 0.779 - - - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
44. Rundc3a ENSMUSG00000006575 421 2.354 0.783 0.757 - - 0.814 - RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
45. Dusp8 ENSMUSG00000037887 348 2.351 - - 0.728 - 0.821 0.802 dual specificity phosphatase 8 [Source:MGI Symbol;Acc:MGI:106626]
46. Rbfox1 ENSMUSG00000008658 758 2.349 0.743 0.774 - - - 0.832 RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:MGI Symbol;Acc:MGI:1926224]
47. Onecut2 ENSMUSG00000045991 2334 2.344 0.869 - - - 0.754 0.721 one cut domain, family member 2 [Source:MGI Symbol;Acc:MGI:1891408]
48. Disp2 ENSMUSG00000040035 230 2.343 - - 0.713 - 0.774 0.856 dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
49. Apc2 ENSMUSG00000020135 328 2.341 - 0.808 - - 0.765 0.768 adenomatosis polyposis coli 2 [Source:MGI Symbol;Acc:MGI:1346052]
50. Syn1 ENSMUSG00000037217 289 2.332 - - 0.741 - 0.756 0.835 synapsin I [Source:MGI Symbol;Acc:MGI:98460]
51. Rab3c ENSMUSG00000021700 370 2.327 - 0.788 - - 0.702 0.837 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
52. Akap6 ENSMUSG00000061603 420 2.318 0.843 - - - 0.724 0.751 A kinase (PRKA) anchor protein 6 [Source:MGI Symbol;Acc:MGI:3050566]
53. St6galnac5 ENSMUSG00000039037 543 2.313 0.782 0.747 0.784 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [Source:MGI Symbol;Acc:MGI:1349471]
54. Fez1 ENSMUSG00000032118 2537 2.31 - - 0.719 - 0.836 0.755 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
55. Nkx6-1 ENSMUSG00000035187 377 2.306 0.833 - 0.732 - - 0.741 NK6 homeobox 1 [Source:MGI Symbol;Acc:MGI:1206039]
56. Snap25 ENSMUSG00000027273 427 2.304 - 0.702 - - 0.845 0.757 synaptosomal-associated protein 25 [Source:MGI Symbol;Acc:MGI:98331]
57. Nfasc ENSMUSG00000026442 356 2.302 0.813 0.771 0.718 - - - neurofascin [Source:MGI Symbol;Acc:MGI:104753]
58. Ncan ENSMUSG00000002341 521 2.297 0.786 - 0.779 - 0.732 - neurocan [Source:MGI Symbol;Acc:MGI:104694]
59. Ube2ql1 ENSMUSG00000052981 312 2.292 - - 0.752 - 0.718 0.822 ubiquitin-conjugating enzyme E2Q family-like 1 [Source:MGI Symbol;Acc:MGI:1924230]
60. Map2 ENSMUSG00000015222 2576 2.286 0.830 0.729 0.727 - - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
61. Trim67 ENSMUSG00000036913 70 2.27 - - 0.741 - 0.749 0.780 tripartite motif-containing 67 [Source:MGI Symbol;Acc:MGI:3045323]
62. Ap3b2 ENSMUSG00000062444 565 2.241 0.716 - - - 0.797 0.728 adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
63. Prdm8 ENSMUSG00000035456 310 2.233 0.722 - - 0.704 0.807 - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
64. Ecel1 ENSMUSG00000026247 83 2.206 0.754 - 0.726 - - 0.726 endothelin converting enzyme-like 1 [Source:MGI Symbol;Acc:MGI:1343461]
65. Olig2 ENSMUSG00000039830 329 1.761 0.920 0.841 - - - - oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
66. Spock2 ENSMUSG00000058297 1096 1.674 - - - - 0.876 0.798 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
67. Rab6b ENSMUSG00000032549 1005 1.674 - - - - 0.868 0.806 RAB6B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:107283]
68. Soga3 ENSMUSG00000038916 3972 1.645 - - 0.855 - 0.790 - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
69. Mapk8ip2 ENSMUSG00000022619 910 1.601 - - - - 0.835 0.766 mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
70. D930028M14Rik ENSMUSG00000074274 452 1.591 0.810 0.781 - - - - RIKEN cDNA D930028M14 gene [Source:MGI Symbol;Acc:MGI:3687343]
71. Sptbn2 ENSMUSG00000067889 4571 1.588 - - - - 0.807 0.781 spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
72. Slit2 ENSMUSG00000031558 1660 1.581 0.777 0.804 - - - - slit guidance ligand 2 [Source:MGI Symbol;Acc:MGI:1315205]
73. Fgfbp3 ENSMUSG00000047632 2036 1.566 - - - - 0.783 0.783 fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
74. Snrpn ENSMUSG00000102252 2727 1.565 - - 0.809 - 0.756 - small nuclear ribonucleoprotein N [Source:MGI Symbol;Acc:MGI:98347]
75. Acot7 ENSMUSG00000028937 5139 1.562 - - 0.808 - - 0.754 acyl-CoA thioesterase 7 [Source:MGI Symbol;Acc:MGI:1917275]
76. Unc79 ENSMUSG00000021198 73 1.556 0.786 0.770 - - - - unc-79 homolog [Source:MGI Symbol;Acc:MGI:2684729]
77. Rasgef1c ENSMUSG00000020374 48 1.555 0.843 - 0.712 - - - RasGEF domain family, member 1C [Source:MGI Symbol;Acc:MGI:1921813]
78. Fam155a ENSMUSG00000079157 182 1.554 - - - - 0.798 0.756 family with sequence similarity 155, member A [Source:MGI Symbol;Acc:MGI:2142765]
79. Chodl ENSMUSG00000022860 172 1.554 0.827 0.727 - - - - chondrolectin [Source:MGI Symbol;Acc:MGI:2179069]
80. Kcnq2 ENSMUSG00000016346 94 1.552 - - 0.784 - - 0.768 potassium voltage-gated channel, subfamily Q, member 2 [Source:MGI Symbol;Acc:MGI:1309503]
81. A930011O12Rik A930011O12Rik 359 1.539 - - 0.800 - - 0.739
82. Scn3a ENSMUSG00000057182 420 1.534 0.725 - - - 0.809 - sodium channel, voltage-gated, type III, alpha [Source:MGI Symbol;Acc:MGI:98249]
83. Hecw1 ENSMUSG00000021301 236 1.524 - - - - 0.749 0.775 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:2444115]
84. Nova2 ENSMUSG00000030411 400 1.507 - 0.726 0.781 - - - neuro-oncological ventral antigen 2 [Source:MGI Symbol;Acc:MGI:104296]
85. Basp1 ENSMUSG00000045763 22946 1.505 - - - - 0.781 0.724 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
86. Gm2990 ENSMUSG00000097794 46 1.5 0.770 - 0.730 - - - predicted gene 2990 [Source:MGI Symbol;Acc:MGI:3781168]
87. Tubb4a ENSMUSG00000062591 500 1.499 - 0.701 - - - 0.798 tubulin, beta 4A class IVA [Source:MGI Symbol;Acc:MGI:107848]
88. Apba2 ENSMUSG00000030519 840 1.496 - - 0.779 - 0.717 - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
89. Ctnna2 ENSMUSG00000063063 310 1.487 - - 0.720 - 0.767 - catenin (cadherin associated protein), alpha 2 [Source:MGI Symbol;Acc:MGI:88275]
90. Ank3 ENSMUSG00000069601 3116 1.486 - - - - 0.785 0.701 ankyrin 3, epithelial [Source:MGI Symbol;Acc:MGI:88026]
91. Gdap1l1 ENSMUSG00000017943 143 1.484 0.742 0.742 - - - - ganglioside-induced differentiation-associated protein 1-like 1 [Source:MGI Symbol;Acc:MGI:2385163]
92. Nhlh1 ENSMUSG00000051251 2017 1.473 0.771 - 0.702 - - - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
93. Ngfr ENSMUSG00000000120 1831 1.462 - 0.753 0.709 - - - nerve growth factor receptor (TNFR superfamily, member 16) [Source:MGI Symbol;Acc:MGI:97323]
94. Stk32a ENSMUSG00000039954 20 1.458 0.748 - 0.710 - - - serine/threonine kinase 32A [Source:MGI Symbol;Acc:MGI:2442403]
95. Gprin1 ENSMUSG00000069227 1013 1.458 - - 0.733 - - 0.725 G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
96. Stmn4 ENSMUSG00000022044 140 1.456 - 0.749 - - 0.707 - stathmin-like 4 [Source:MGI Symbol;Acc:MGI:1931224]
97. Scg2 ENSMUSG00000050711 91 1.453 - 0.739 - - 0.714 - secretogranin II [Source:MGI Symbol;Acc:MGI:103033]
98. Cnih2 ENSMUSG00000024873 3004 1.447 - - - 0.707 0.740 - cornichon family AMPA receptor auxiliary protein 2 [Source:MGI Symbol;Acc:MGI:1277225]
99. Tubb2b ENSMUSG00000045136 41060 1.437 - - 0.723 - - 0.714 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
100. Igsf21 ENSMUSG00000040972 143 1.432 - - 0.725 - 0.707 - immunoglobulin superfamily, member 21 [Source:MGI Symbol;Acc:MGI:2681842]

There are 123 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA