Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Nedd9

Gene Name Gene ID Reads Annotation
Nedd9 ENSMUSG00000021365 1501 neural precursor cell expressed, developmentally down-regulated gene 9 [Source:MGI Symbol;Acc:MGI:97302]







Genes with expression patterns similar to Nedd9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Nedd9 ENSMUSG00000021365 1501 6 1.000 1.000 1.000 1.000 1.000 1.000 neural precursor cell expressed, developmentally down-regulated gene 9 [Source:MGI Symbol;Acc:MGI:97302]
2. C130071C03Rik ENSMUSG00000050334 1582 2.284 0.785 0.753 - 0.746 - - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
3. Gbx2 ENSMUSG00000034486 478 2.263 0.753 0.757 - 0.753 - - gastrulation brain homeobox 2 [Source:MGI Symbol;Acc:MGI:95668]
4. Sox2 ENSMUSG00000074637 8409 2.256 0.756 0.767 - 0.733 - - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
5. Pax3 ENSMUSG00000004872 3095 2.242 0.790 0.736 - 0.716 - - paired box 3 [Source:MGI Symbol;Acc:MGI:97487]
6. Fabp7 ENSMUSG00000019874 3183 2.188 0.764 - - 0.713 0.711 - fatty acid binding protein 7, brain [Source:MGI Symbol;Acc:MGI:101916]
7. Sox1 ENSMUSG00000096014 349 1.514 0.736 0.778 - - - - SRY (sex determining region Y)-box 1 [Source:MGI Symbol;Acc:MGI:98357]
8. Scube2 ENSMUSG00000007279 406 1.5 0.712 0.788 - - - - signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
9. Hoxc9 ENSMUSG00000036139 4145 1.49 0.774 0.716 - - - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
10. Ildr2 ENSMUSG00000040612 1142 1.483 0.752 - - - 0.731 - immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
11. Hap1 ENSMUSG00000006930 613 1.466 0.761 0.705 - - - - huntingtin-associated protein 1 [Source:MGI Symbol;Acc:MGI:1261831]
12. Pou3f2 ENSMUSG00000095139 2416 1.445 0.706 - - 0.739 - - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
13. Ckb ENSMUSG00000001270 8443 1.42 - 0.704 - 0.716 - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
14. A730017C20Rik ENSMUSG00000050875 517 0.802 - - 0.802 - - - RIKEN cDNA A730017C20 gene [Source:MGI Symbol;Acc:MGI:2442934]
15. Rfx4 ENSMUSG00000020037 455 0.797 0.797 - - - - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
16. H2-K1 ENSMUSG00000061232 613 0.795 0.795 - - - - - histocompatibility 2, K1, K region [Source:MGI Symbol;Acc:MGI:95904]
17. Mkrn1 ENSMUSG00000029922 1839 0.793 0.793 - - - - - makorin, ring finger protein, 1 [Source:MGI Symbol;Acc:MGI:1859353]
18. Chst1 ENSMUSG00000027221 323 0.783 0.783 - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1924219]
19. Pcdh8 ENSMUSG00000036422 452 0.78 0.780 - - - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
20. Irx2 ENSMUSG00000001504 819 0.761 0.761 - - - - - Iroquois homeobox 2 [Source:MGI Symbol;Acc:MGI:1197526]
21. Alpk2 ENSMUSG00000032845 1665 0.76 0.760 - - - - - alpha-kinase 2 [Source:MGI Symbol;Acc:MGI:2449492]
22. Crabp2 ENSMUSG00000004885 6976 0.753 - 0.753 - - - - cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
23. Prdm13 ENSMUSG00000040478 193 0.753 0.753 - - - - - PR domain containing 13 [Source:MGI Symbol;Acc:MGI:2448528]
24. Sp5 ENSMUSG00000075304 106 0.752 0.752 - - - - - trans-acting transcription factor 5 [Source:MGI Symbol;Acc:MGI:1927715]
25. Cenpv ENSMUSG00000018509 1922 0.747 - 0.747 - - - - centromere protein V [Source:MGI Symbol;Acc:MGI:1920389]
26. Zic3 ENSMUSG00000067860 549 0.744 - - - 0.744 - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
27. Cacng4 ENSMUSG00000020723 1024 0.744 - 0.744 - - - - calcium channel, voltage-dependent, gamma subunit 4 [Source:MGI Symbol;Acc:MGI:1859167]
28. Nppc ENSMUSG00000026241 26 0.743 - 0.743 - - - - natriuretic peptide type C [Source:MGI Symbol;Acc:MGI:97369]
29. Rnf144b ENSMUSG00000038068 173 0.742 - 0.742 - - - - ring finger protein 144B [Source:MGI Symbol;Acc:MGI:2384986]
30. Pou3f3 ENSMUSG00000045515 5137 0.736 - - - 0.736 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
31. Khdrbs3 ENSMUSG00000022332 2266 0.735 0.735 - - - - - KH domain containing, RNA binding, signal transduction associated 3 [Source:MGI Symbol;Acc:MGI:1313312]
32. Slain1 ENSMUSG00000055717 237 0.733 0.733 - - - - - SLAIN motif family, member 1 [Source:MGI Symbol;Acc:MGI:2145578]
33. Msx3 ENSMUSG00000025469 236 0.73 0.730 - - - - - msh homeobox 3 [Source:MGI Symbol;Acc:MGI:106587]
34. Sema5b ENSMUSG00000052133 891 0.73 0.730 - - - - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B [Source:MGI Symbol;Acc:MGI:107555]
35. Pou3f1 ENSMUSG00000090125 496 0.728 0.728 - - - - - POU domain, class 3, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101896]
36. Fam19a5 ENSMUSG00000054863 859 0.727 0.727 - - - - - family with sequence similarity 19, member A5 [Source:MGI Symbol;Acc:MGI:2146182]
37. Spsb4 ENSMUSG00000046997 5432 0.725 0.725 - - - - - splA/ryanodine receptor domain and SOCS box containing 4 [Source:MGI Symbol;Acc:MGI:2183445]
38. Celsr1 ENSMUSG00000016028 500 0.724 0.724 - - - - - cadherin, EGF LAG seven-pass G-type receptor 1 [Source:MGI Symbol;Acc:MGI:1100883]
39. Wscd1 ENSMUSG00000020811 318 0.722 0.722 - - - - - WSC domain containing 1 [Source:MGI Symbol;Acc:MGI:2448493]
40. 1110004E09Rik 1212 0.721 0.721 - - - - - RIKEN cDNA 1110004E09 gene
41. Zic4 ENSMUSG00000036972 1968 0.717 - - - 0.717 - - zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
42. Zic1 ENSMUSG00000032368 7734 0.716 - - - 0.716 - - zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
43. Dach1 ENSMUSG00000055639 1422 0.714 0.714 - - - - - dachshund family transcription factor 1 [Source:MGI Symbol;Acc:MGI:1277991]
44. Sox3 ENSMUSG00000045179 1137 0.71 - - - 0.710 - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
45. Lhx5 ENSMUSG00000029595 102 0.709 0.709 - - - - - LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]
46. Psat1 ENSMUSG00000024640 15774 0.709 0.709 - - - - - phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
47. Tspan18 ENSMUSG00000027217 3290 0.709 0.709 - - - - - tetraspanin 18 [Source:MGI Symbol;Acc:MGI:1917186]
48. Car2 ENSMUSG00000027562 1176 0.708 0.708 - - - - - carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]
49. Erbb3 ENSMUSG00000018166 210 0.707 - - 0.707 - - - erb-b2 receptor tyrosine kinase 3 [Source:MGI Symbol;Acc:MGI:95411]
50. Ptprn2 ENSMUSG00000056553 489 0.706 - 0.706 - - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:MGI Symbol;Acc:MGI:107418]
51. Hbb-bs ENSMUSG00000052305 2551 0.706 0.706 - - - - - hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
52. Mto1 ENSMUSG00000032342 1387 0.705 - 0.705 - - - - mitochondrial tRNA translation optimization 1 [Source:MGI Symbol;Acc:MGI:1915541]
53. Metrn ENSMUSG00000002274 764 0.705 0.705 - - - - - meteorin, glial cell differentiation regulator [Source:MGI Symbol;Acc:MGI:1917333]
54. Spata13 ENSMUSG00000021990 1020 0.704 0.704 - - - - - spermatogenesis associated 13 [Source:MGI Symbol;Acc:MGI:104838]
55. Rmst ENSMUSG00000112117 594 0.704 0.704 - - - - - rhabdomyosarcoma 2 associated transcript (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1099806]
56. Zbtb18 ENSMUSG00000063659 1287 0.703 0.703 - - - - - zinc finger and BTB domain containing 18 [Source:MGI Symbol;Acc:MGI:1353609]
57. Btbd17 ENSMUSG00000000202 565 0.703 - 0.703 - - - - BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
58. Msi1 ENSMUSG00000054256 13785 0.7 - - - 0.700 - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA