Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Neb

Gene Name Gene ID Reads Annotation
Neb ENSMUSG00000026950 948 nebulin [Source:MGI Symbol;Acc:MGI:97292]







Genes with expression patterns similar to Neb

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Neb ENSMUSG00000026950 948 6 1.000 1.000 1.000 1.000 1.000 1.000 nebulin [Source:MGI Symbol;Acc:MGI:97292]
2. Ttn ENSMUSG00000051747 3015 4.123 0.795 - 0.747 0.886 0.882 0.813 titin [Source:MGI Symbol;Acc:MGI:98864]
3. Myh3 ENSMUSG00000020908 1729 3.263 0.914 - - 0.766 0.874 0.709 myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
4. Tnnc2 ENSMUSG00000017300 2196 3.254 0.871 - - 0.783 0.862 0.738 troponin C2, fast [Source:MGI Symbol;Acc:MGI:98780]
5. Mylpf ENSMUSG00000030672 5024 2.588 0.848 - - 0.822 0.918 - myosin light chain, phosphorylatable, fast skeletal muscle [Source:MGI Symbol;Acc:MGI:97273]
6. Actc1 ENSMUSG00000068614 13555 2.521 - - - 0.793 0.926 0.802 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
7. Myl1 ENSMUSG00000061816 2895 2.401 - - - 0.775 0.908 0.718 myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
8. Fibin ENSMUSG00000074971 907 2.396 - - - 0.721 0.922 0.753 fin bud initiation factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:1914856]
9. Tpm2 ENSMUSG00000028464 1803 2.361 - - - 0.711 0.880 0.770 tropomyosin 2, beta [Source:MGI Symbol;Acc:MGI:98810]
10. Acta1 ENSMUSG00000031972 1386 2.308 0.741 - - - 0.855 0.712 actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
11. Casq2 ENSMUSG00000027861 587 2.234 0.729 - - - 0.792 0.713 calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
12. Hfe2 ENSMUSG00000038403 372 2.204 0.775 - - - 0.721 0.708 hemochromatosis type 2 (juvenile) [Source:MGI Symbol;Acc:MGI:1916835]
13. Myog ENSMUSG00000026459 855 1.678 - - - - 0.867 0.811 myogenin [Source:MGI Symbol;Acc:MGI:97276]
14. Tnnt2 ENSMUSG00000026414 1982 1.653 0.811 - - - 0.842 - troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
15. Tnnc1 ENSMUSG00000091898 572 1.614 - - - - 0.848 0.766 troponin C, cardiac/slow skeletal [Source:MGI Symbol;Acc:MGI:98779]
16. Tnnt1 ENSMUSG00000064179 836 1.589 - - - - 0.843 0.746 troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]
17. Scx ENSMUSG00000034161 568 1.557 - - - - 0.742 0.815 scleraxis [Source:MGI Symbol;Acc:MGI:102934]
18. Rbm24 ENSMUSG00000038132 634 1.533 0.742 - - - 0.791 - RNA binding motif protein 24 [Source:MGI Symbol;Acc:MGI:3610364]
19. Cdkn1a ENSMUSG00000023067 2571 1.522 - - - - 0.779 0.743 cyclin-dependent kinase inhibitor 1A (P21) [Source:MGI Symbol;Acc:MGI:104556]
20. Srl ENSMUSG00000022519 577 1.501 - - - - 0.780 0.721 sarcalumenin [Source:MGI Symbol;Acc:MGI:2146620]
21. Ablim3 ENSMUSG00000032735 497 1.486 - - - 0.707 0.779 - actin binding LIM protein family, member 3 [Source:MGI Symbol;Acc:MGI:2442582]
22. Myf5 ENSMUSG00000000435 593 1.479 - - - - 0.753 0.726 myogenic factor 5 [Source:MGI Symbol;Acc:MGI:97252]
23. Ntn1 ENSMUSG00000020902 1175 1.477 0.766 - - - 0.711 - netrin 1 [Source:MGI Symbol;Acc:MGI:105088]
24. Wnt5a ENSMUSG00000021994 2387 1.47 - - - - 0.734 0.736 wingless-type MMTV integration site family, member 5A [Source:MGI Symbol;Acc:MGI:98958]
25. Tmem8c 204 1.467 - - - - 0.767 0.700 transmembrane protein 8C, transcript variant 1
26. Foxd1 ENSMUSG00000078302 2176 1.461 - - 0.710 - 0.751 - forkhead box D1 [Source:MGI Symbol;Acc:MGI:1347463]
27. Meox1 ENSMUSG00000001493 3105 1.445 - - - 0.704 0.741 - mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:103220]
28. Cdkn1c ENSMUSG00000037664 49550 1.437 - - - - 0.734 0.703 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
29. Ebf1 ENSMUSG00000057098 3112 1.434 0.709 - 0.725 - - - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
30. Nkx6-1 ENSMUSG00000035187 377 0.87 0.870 - - - - - NK6 homeobox 1 [Source:MGI Symbol;Acc:MGI:1206039]
31. Tcf15 ENSMUSG00000068079 1156 0.859 0.859 - - - - - transcription factor 15 [Source:MGI Symbol;Acc:MGI:104664]
32. Dmrt2 ENSMUSG00000048138 949 0.852 0.852 - - - - - doublesex and mab-3 related transcription factor 2 [Source:MGI Symbol;Acc:MGI:1330307]
33. Sln ENSMUSG00000042045 405 0.847 - - - - 0.847 - sarcolipin [Source:MGI Symbol;Acc:MGI:1913652]
34. Myl4 ENSMUSG00000061086 819 0.844 - - - - 0.844 - myosin, light polypeptide 4 [Source:MGI Symbol;Acc:MGI:97267]
35. Rasgef1c ENSMUSG00000020374 48 0.812 0.812 - - - - - RasGEF domain family, member 1C [Source:MGI Symbol;Acc:MGI:1921813]
36. St18 ENSMUSG00000033740 408 0.803 0.803 - - - - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
37. St8sia3 ENSMUSG00000056812 268 0.802 0.802 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:MGI Symbol;Acc:MGI:106019]
38. Mapt ENSMUSG00000018411 1834 0.794 0.794 - - - - - microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
39. Grin3a ENSMUSG00000039579 433 0.791 - - - - 0.791 - glutamate receptor ionotropic, NMDA3A [Source:MGI Symbol;Acc:MGI:1933206]
40. Wnt16 ENSMUSG00000029671 196 0.791 0.791 - - - - - wingless-type MMTV integration site family, member 16 [Source:MGI Symbol;Acc:MGI:2136018]
41. Nyap2 ENSMUSG00000054976 115 0.79 0.790 - - - - - neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 [Source:MGI Symbol;Acc:MGI:2443135]
42. Ina ENSMUSG00000034336 3835 0.787 0.787 - - - - - internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
43. Osr1 ENSMUSG00000048387 855 0.783 - - - - 0.783 - odd-skipped related transcription factor 1 [Source:MGI Symbol;Acc:MGI:1344424]
44. Uts2b ENSMUSG00000056423 294 0.776 0.776 - - - - - urotensin 2B [Source:MGI Symbol;Acc:MGI:2677064]
45. Nefm ENSMUSG00000022054 2534 0.776 0.776 - - - - - neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
46. Nmnat2 ENSMUSG00000042751 205 0.775 0.775 - - - - - nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
47. Olig2 ENSMUSG00000039830 329 0.774 0.774 - - - - - oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
48. Il17b ENSMUSG00000024578 68 0.773 0.773 - - - - - interleukin 17B [Source:MGI Symbol;Acc:MGI:1928397]
49. Stmn2 ENSMUSG00000027500 6200 0.77 0.770 - - - - - stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
50. Synpo2l ENSMUSG00000039376 565 0.764 - - - - 0.764 - synaptopodin 2-like [Source:MGI Symbol;Acc:MGI:1916010]
51. Pygm ENSMUSG00000032648, ENSMUSG00000106877 531 0.762 - - - - 0.762 - muscle glycogen phosphorylase [Source:MGI Symbol;Acc:MGI:97830]
52. Col25a1 ENSMUSG00000058897 866 0.761 - - - - 0.761 - collagen, type XXV, alpha 1 [Source:MGI Symbol;Acc:MGI:1924268]
53. Nefl ENSMUSG00000022055 4031 0.757 0.757 - - - - - neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
54. 2310002L09Rik ENSMUSG00000028396 135 0.757 - - - - 0.757 - RIKEN cDNA 2310002L09 gene [Source:MGI Symbol;Acc:MGI:1916780]
55. Arpp21 ENSMUSG00000032503 375 0.755 - - - - 0.755 - cyclic AMP-regulated phosphoprotein, 21 [Source:MGI Symbol;Acc:MGI:107562]
56. Mllt11 ENSMUSG00000053192 1776 0.753 0.753 - - - - - myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
57. Chrnb1 ENSMUSG00000041189 253 0.751 - - - - 0.751 - cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) [Source:MGI Symbol;Acc:MGI:87890]
58. Dusp6 ENSMUSG00000019960 2365 0.748 - 0.748 - - - - dual specificity phosphatase 6 [Source:MGI Symbol;Acc:MGI:1914853]
59. Stmn3 ENSMUSG00000027581 1327 0.747 0.747 - - - - - stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
60. Arhgap36 ENSMUSG00000036198 404 0.747 0.747 - - - - - Rho GTPase activating protein 36 [Source:MGI Symbol;Acc:MGI:1922654]
61. Rtn1 ENSMUSG00000021087 2547 0.744 0.744 - - - - - reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
62. Mef2c ENSMUSG00000005583 2710 0.744 0.744 - - - - - myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458]
63. Isl1 ENSMUSG00000042258 3553 0.744 0.744 - - - - - ISL1 transcription factor, LIM/homeodomain [Source:MGI Symbol;Acc:MGI:101791]
64. Cdh15 ENSMUSG00000031962 318 0.742 - - - - - 0.742 cadherin 15 [Source:MGI Symbol;Acc:MGI:106672]
65. Elavl3 ENSMUSG00000003410 2830 0.74 0.740 - - - - - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
66. Myt1 ENSMUSG00000010505 661 0.739 0.739 - - - - - myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
67. Dcx ENSMUSG00000031285 1733 0.738 0.738 - - - - - doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
68. Tubb3 ENSMUSG00000062380 9211 0.738 0.738 - - - - - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
69. Onecut2 ENSMUSG00000045991 2334 0.736 0.736 - - - - - one cut domain, family member 2 [Source:MGI Symbol;Acc:MGI:1891408]
70. Cryab ENSMUSG00000032060 732 0.735 - - - - 0.735 - crystallin, alpha B [Source:MGI Symbol;Acc:MGI:88516]
71. Pappa2 ENSMUSG00000073530 104 0.733 0.733 - - - - - pappalysin 2 [Source:MGI Symbol;Acc:MGI:3051647]
72. Cdk5r1 ENSMUSG00000048895 2376 0.733 0.733 - - - - - cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
73. Actn2 ENSMUSG00000052374 152 0.733 - - - - 0.733 - actinin alpha 2 [Source:MGI Symbol;Acc:MGI:109192]
74. Pax1 ENSMUSG00000037034 2297 0.732 0.732 - - - - - paired box 1 [Source:MGI Symbol;Acc:MGI:97485]
75. Rgmb ENSMUSG00000048027 632 0.731 0.731 - - - - - repulsive guidance molecule family member B [Source:MGI Symbol;Acc:MGI:1916049]
76. Foxd2 ENSMUSG00000055210 465 0.731 - - - - 0.731 - forkhead box D2 [Source:MGI Symbol;Acc:MGI:1347471]
77. Nfasc ENSMUSG00000026442 356 0.73 0.730 - - - - - neurofascin [Source:MGI Symbol;Acc:MGI:104753]
78. Isl2 ENSMUSG00000032318 488 0.729 0.729 - - - - - insulin related protein 2 (islet 2) [Source:MGI Symbol;Acc:MGI:109156]
79. Crtac1 ENSMUSG00000042401 228 0.728 0.728 - - - - - cartilage acidic protein 1 [Source:MGI Symbol;Acc:MGI:1920082]
80. Lrig1 ENSMUSG00000030029 649 0.727 0.727 - - - - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:MGI Symbol;Acc:MGI:107935]
81. Lhx3 ENSMUSG00000026934 117 0.727 0.727 - - - - - LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
82. Myh7 ENSMUSG00000053093 156 0.727 0.727 - - - - - myosin, heavy polypeptide 7, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:2155600]
83. 2700069I18Rik ENSMUSG00000086224 505 0.726 0.726 - - - - - RIKEN cDNA 2700069I18 gene [Source:MGI Symbol;Acc:MGI:1919858]
84. Sp8 ENSMUSG00000048562 219 0.724 0.724 - - - - - trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
85. Ptch2 ENSMUSG00000028681 386 0.723 0.723 - - - - - patched 2 [Source:MGI Symbol;Acc:MGI:1095405]
86. St6galnac5 ENSMUSG00000039037 543 0.719 0.719 - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [Source:MGI Symbol;Acc:MGI:1349471]
87. Gpm6b ENSMUSG00000031342 715 0.711 0.711 - - - - - glycoprotein m6b [Source:MGI Symbol;Acc:MGI:107672]
88. Rufy3 ENSMUSG00000029291 695 0.711 0.711 - - - - - RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
89. Trib2 ENSMUSG00000020601 1840 0.71 0.710 - - - - - tribbles pseudokinase 2 [Source:MGI Symbol;Acc:MGI:2145021]
90. Klhl41 ENSMUSG00000075307 333 0.709 - - - - 0.709 - kelch-like 41 [Source:MGI Symbol;Acc:MGI:2683854]
91. 2310015B20Rik 2310015B20Rik 227 0.709 - - - - 0.709 -
92. Ccne1 ENSMUSG00000002068 2574 0.709 - - - - 0.709 - cyclin E1 [Source:MGI Symbol;Acc:MGI:88316]
93. Hspb1 ENSMUSG00000004951 1136 0.708 - - - - 0.708 - heat shock protein 1 [Source:MGI Symbol;Acc:MGI:96240]
94. Nhlh1 ENSMUSG00000051251 2017 0.708 0.708 - - - - - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
95. Meox2 ENSMUSG00000036144 343 0.708 0.708 - - - - - mesenchyme homeobox 2 [Source:MGI Symbol;Acc:MGI:103219]
96. Myod1 ENSMUSG00000009471 536 0.707 - - - - 0.707 - myogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:97275]
97. Scn3a ENSMUSG00000057182 420 0.706 0.706 - - - - - sodium channel, voltage-gated, type III, alpha [Source:MGI Symbol;Acc:MGI:98249]
98. Med22 ENSMUSG00000015776 736 0.703 - 0.703 - - - - mediator complex subunit 22 [Source:MGI Symbol;Acc:MGI:98446]
99. Cadps ENSMUSG00000054423 870 0.703 0.703 - - - - - Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
100. Vash1 ENSMUSG00000021256 22 0.703 0.703 - - - - - vasohibin 1 [Source:MGI Symbol;Acc:MGI:2442543]

There are 2 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA