Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Neat1

Gene Name Gene ID Reads Annotation
Neat1 ENSMUSG00000092274 205 nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]







Genes with expression patterns similar to Neat1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Neat1 ENSMUSG00000092274 205 6 1.000 1.000 1.000 1.000 1.000 1.000 nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]
2. Kcnk6 ENSMUSG00000046410 113 1.575 - - 0.814 0.761 - - potassium inwardly-rectifying channel, subfamily K, member 6 [Source:MGI Symbol;Acc:MGI:1891291]
3. Tbx4 ENSMUSG00000000094 350 1.521 - 0.741 - 0.780 - - T-box 4 [Source:MGI Symbol;Acc:MGI:102556]
4. Tulp2 ENSMUSG00000023467 174 1.472 - - 0.765 0.707 - - tubby-like protein 2 [Source:MGI Symbol;Acc:MGI:1861600]
5. Ndrg1 ENSMUSG00000005125 165 1.456 0.705 - 0.751 - - - N-myc downstream regulated gene 1 [Source:MGI Symbol;Acc:MGI:1341799]
6. P2rx7 ENSMUSG00000029468 35 0.967 - - 0.967 - - - purinergic receptor P2X, ligand-gated ion channel, 7 [Source:MGI Symbol;Acc:MGI:1339957]
7. Tac2 ENSMUSG00000025400 746 0.96 - - 0.960 - - - tachykinin 2 [Source:MGI Symbol;Acc:MGI:98476]
8. Phex ENSMUSG00000057457 65 0.959 - - 0.959 - - - phosphate regulating endopeptidase homolog, X-linked [Source:MGI Symbol;Acc:MGI:107489]
9. 4933430I17Rik ENSMUSG00000058046 29 0.941 - - 0.941 - - - RIKEN cDNA 4933430I17 gene [Source:MGI Symbol;Acc:MGI:3045314]
10. Nbeal2 ENSMUSG00000056724 47 0.941 - - 0.941 - - - neurobeachin-like 2 [Source:MGI Symbol;Acc:MGI:2448554]
11. Gm12459 ENSMUSG00000083153 32 0.94 - - 0.940 - - - predicted gene 12459 [Source:MGI Symbol;Acc:MGI:3651071]
12. Mov10l1 ENSMUSG00000015365 22 0.94 - - 0.940 - - - Moloney leukemia virus 10-like 1 [Source:MGI Symbol;Acc:MGI:1891384]
13. Gm11483 ENSMUSG00000083943 8 0.939 - - 0.939 - - - predicted gene 11483 [Source:MGI Symbol;Acc:MGI:3652237]
14. Gm21098 Gm21098 9 0.939 - - 0.939 - - -
15. Gm22897 ENSMUSG00000105400, ENSMUSG00000106272 7 0.939 - - 0.939 - - - predicted gene, 22897 [Source:MGI Symbol;Acc:MGI:5452674]
16. Acsm3 ENSMUSG00000030935 8 0.939 - - 0.939 - - - acyl-CoA synthetase medium-chain family member 3 [Source:MGI Symbol;Acc:MGI:99538]
17. A930001C03Rik ENSMUSG00000087132 15 0.939 - - 0.939 - - - RIKEN cDNA A930001C03 gene [Source:MGI Symbol;Acc:MGI:2441838]
18. Gdf15 ENSMUSG00000038508 10 0.938 - - - 0.938 - - growth differentiation factor 15 [Source:MGI Symbol;Acc:MGI:1346047]
19. Vmn1r-ps68 ENSMUSG00000092359 27 0.938 - - - 0.938 - - vomeronasal 1 receptor, pseudogene 68 [Source:MGI Symbol;Acc:MGI:3852413]
20. 4933408B17Rik ENSMUSG00000049357 33 0.938 - - 0.938 - - - RIKEN cDNA 4933408B17 gene [Source:MGI Symbol;Acc:MGI:3045347]
21. Mb ENSMUSG00000018893 25 0.938 - - 0.938 - - - myoglobin [Source:MGI Symbol;Acc:MGI:96922]
22. Otoa ENSMUSG00000034990 11 0.938 - - - 0.938 - - otoancorin [Source:MGI Symbol;Acc:MGI:2149209]
23. A130051J06Rik ENSMUSG00000097643 24 0.938 - - - 0.938 - - RIKEN cDNA A130051J0 gene [Source:MGI Symbol;Acc:MGI:3642574]
24. Glipr1 ENSMUSG00000056888 12 0.938 - - - 0.938 - - GLI pathogenesis-related 1 (glioma) [Source:MGI Symbol;Acc:MGI:1920940]
25. Gabbr2 ENSMUSG00000039809 53 0.938 - - 0.938 - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:MGI Symbol;Acc:MGI:2386030]
26. Gm9888 ENSMUSG00000052724 44 0.937 - - 0.937 - - - predicted gene 9888 [Source:MGI Symbol;Acc:MGI:3642202]
27. Glb1l ENSMUSG00000026200 115 0.936 - - 0.936 - - - galactosidase, beta 1-like [Source:MGI Symbol;Acc:MGI:1921827]
28. Aldh3b2 ENSMUSG00000075296 33 0.936 - - 0.936 - - - aldehyde dehydrogenase 3 family, member B2 [Source:MGI Symbol;Acc:MGI:2147613]
29. Endod1 ENSMUSG00000037419 556 0.935 - - 0.935 - - - endonuclease domain containing 1 [Source:MGI Symbol;Acc:MGI:1919196]
30. Gm16070 ENSMUSG00000085125 40 0.935 - - 0.935 - - - predicted gene 16070 [Source:MGI Symbol;Acc:MGI:3801761]
31. Rps27 ENSMUSG00000090733 17 0.934 - - 0.934 - - - ribosomal protein S27 [Source:MGI Symbol;Acc:MGI:1888676]
32. Zfp879 ENSMUSG00000044296 77 0.934 - - 0.934 - - - zinc finger protein 879 [Source:MGI Symbol;Acc:MGI:3053099]
33. Rinl ENSMUSG00000051735 71 0.934 - - 0.934 - - - Ras and Rab interactor-like [Source:MGI Symbol;Acc:MGI:2444024]
34. C8b ENSMUSG00000029656 12 0.933 - - - 0.933 - - complement component 8, beta polypeptide [Source:MGI Symbol;Acc:MGI:88236]
35. Fam46b 25 0.933 - - 0.933 - - - family with sequence similarity 46, member B
36. Gm826 ENSMUSG00000074623 27 0.933 - - - 0.933 - - predicted gene 826 [Source:MGI Symbol;Acc:MGI:2685672]
37. Kbtbd13 ENSMUSG00000054978 79 0.932 - - 0.932 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:MGI Symbol;Acc:MGI:1921742]
38. Cbln3 ENSMUSG00000040380 51 0.93 - - - 0.930 - - cerebellin 3 precursor protein [Source:MGI Symbol;Acc:MGI:1889286]
39. Zpbp ENSMUSG00000020193 26 0.93 - - 0.930 - - - zona pellucida binding protein [Source:MGI Symbol;Acc:MGI:1855701]
40. Colec11 ENSMUSG00000036655 47 0.929 - - 0.929 - - - collectin sub-family member 11 [Source:MGI Symbol;Acc:MGI:1918943]
41. AU015836 ENSMUSG00000081044 36 0.929 - - 0.929 - - - expressed sequence AU015836 [Source:MGI Symbol;Acc:MGI:2147954]
42. Bhlhe40 ENSMUSG00000030103 67 0.929 - - 0.929 - - - basic helix-loop-helix family, member e40 [Source:MGI Symbol;Acc:MGI:1097714]
43. 4732491K20Rik ENSMUSG00000097350 92 0.929 - - 0.929 - - - RIKEN cDNA 4732491K20 gene [Source:MGI Symbol;Acc:MGI:3026975]
44. Angptl3 ENSMUSG00000028553 11 0.929 - - - 0.929 - - angiopoietin-like 3 [Source:MGI Symbol;Acc:MGI:1353627]
45. Ccrl2 ENSMUSG00000043953 22 0.929 - - - 0.929 - - chemokine (C-C motif) receptor-like 2 [Source:MGI Symbol;Acc:MGI:1920904]
46. Abcb4 ENSMUSG00000042476 26 0.929 - - - 0.929 - - ATP-binding cassette, sub-family B (MDR/TAP), member 4 [Source:MGI Symbol;Acc:MGI:97569]
47. Sh2d4a ENSMUSG00000053886 52 0.928 - - - 0.928 - - SH2 domain containing 4A [Source:MGI Symbol;Acc:MGI:1919531]
48. Gm13328 ENSMUSG00000081128 29 0.927 - - 0.927 - - - predicted gene 13328 [Source:MGI Symbol;Acc:MGI:3651185]
49. Ero1lb ENSMUSG00000057069 171 0.927 - - 0.927 - - - ERO1-like beta (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914725]
50. Lgals7 ENSMUSG00000053522 36 0.926 - - 0.926 - - - lectin, galactose binding, soluble 7 [Source:MGI Symbol;Acc:MGI:1316742]
51. Gfi1 ENSMUSG00000029275 21 0.926 - - 0.926 - - - growth factor independent 1 [Source:MGI Symbol;Acc:MGI:103170]
52. Cldn3 ENSMUSG00000070473 65 0.925 - - 0.925 - - - claudin 3 [Source:MGI Symbol;Acc:MGI:1329044]
53. Hc ENSMUSG00000026874 12 0.924 - - - 0.924 - - hemolytic complement [Source:MGI Symbol;Acc:MGI:96031]
54. Gm18294 ENSMUSG00000093416 29 0.923 - - 0.923 - - - predicted gene, 18294 [Source:MGI Symbol;Acc:MGI:5010479]
55. C920006O11Rik ENSMUSG00000097574 120 0.923 - - 0.923 - - - RIKEN cDNA C920006O11 gene [Source:MGI Symbol;Acc:MGI:2443759]
56. Kif20a ENSMUSG00000003779 48 0.922 - - 0.922 - - - kinesin family member 20A [Source:MGI Symbol;Acc:MGI:1201682]
57. Ptx4 ENSMUSG00000044172 13 0.92 - - - 0.920 - - pentraxin 4 [Source:MGI Symbol;Acc:MGI:1915759]
58. Il1r2 ENSMUSG00000026073 26 0.919 - - - 0.919 - - interleukin 1 receptor, type II [Source:MGI Symbol;Acc:MGI:96546]
59. Creb3l3 ENSMUSG00000035041 46 0.919 - - - 0.919 - - cAMP responsive element binding protein 3-like 3 [Source:MGI Symbol;Acc:MGI:2384786]
60. Siglec5 Siglec5 18 0.917 - - - 0.917 - -
61. Lefty1 ENSMUSG00000038793 35 0.916 - - - 0.916 - - left right determination factor 1 [Source:MGI Symbol;Acc:MGI:107405]
62. Nptx1 ENSMUSG00000025582 75 0.916 - - 0.916 - - - neuronal pentraxin 1 [Source:MGI Symbol;Acc:MGI:107811]
63. Mar-01 Mar-01 28 0.915 - - - 0.915 - -
64. Tnni2 ENSMUSG00000031097 62 0.914 - - 0.914 - - - troponin I, skeletal, fast 2 [Source:MGI Symbol;Acc:MGI:105070]
65. Kremen1 ENSMUSG00000020393 424 0.913 - - 0.913 - - - kringle containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1933988]
66. Gm10010 ENSMUSG00000056771 37 0.913 - - - 0.913 - - predicted gene 10010 [Source:MGI Symbol;Acc:MGI:3641978]
67. Fam212b 49 0.912 - - 0.912 - - - family with sequence similarity 212, member B, transcript variant X1
68. Prg2 ENSMUSG00000027073 50 0.912 - - - 0.912 - - proteoglycan 2, bone marrow [Source:MGI Symbol;Acc:MGI:103294]
69. Ptpn3 ENSMUSG00000038764 94 0.911 - - 0.911 - - - protein tyrosine phosphatase, non-receptor type 3 [Source:MGI Symbol;Acc:MGI:105307]
70. Tstd2 ENSMUSG00000035495 62 0.91 - - 0.910 - - - thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 [Source:MGI Symbol;Acc:MGI:3039624]
71. Nespos Nespos 46 0.91 - - 0.910 - - -
72. Gm25072 ENSMUSG00000092974 251 0.91 - - 0.910 - - - predicted gene, 25072 [Source:MGI Symbol;Acc:MGI:5454849]
73. Gm1141 ENSMUSG00000073130 43 0.909 - - - 0.909 - - predicted gene 1141 [Source:MGI Symbol;Acc:MGI:2685987]
74. Gm12268 ENSMUSG00000083412 82 0.909 - - 0.909 - - - predicted gene 12268 [Source:MGI Symbol;Acc:MGI:3702435]
75. Sgms2 ENSMUSG00000050931, ENSMUSG00000116143 74 0.909 - - 0.909 - - - sphingomyelin synthase 2 [Source:MGI Symbol;Acc:MGI:1921692]
76. Fam83e ENSMUSG00000054161 107 0.909 - - 0.909 - - - family with sequence similarity 83, member E [Source:MGI Symbol;Acc:MGI:1921063]
77. Il3ra ENSMUSG00000068758 25 0.909 - - 0.909 - - - interleukin 3 receptor, alpha chain [Source:MGI Symbol;Acc:MGI:96553]
78. Gm25835 ENSMUSG00000089542 30 0.909 - - - 0.909 - - predicted gene, 25835 [Source:MGI Symbol;Acc:MGI:5455612]
79. Sla2 ENSMUSG00000027636 24 0.908 - - - 0.908 - - Src-like-adaptor 2 [Source:MGI Symbol;Acc:MGI:1925049]
80. Chst5 ENSMUSG00000031952 39 0.906 - - 0.906 - - - carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 [Source:MGI Symbol;Acc:MGI:1931825]
81. BC042782 BC042782 63 0.906 - - 0.906 - - -
82. Abca8b ENSMUSG00000020620 54 0.905 - - - 0.905 - - ATP-binding cassette, sub-family A (ABC1), member 8b [Source:MGI Symbol;Acc:MGI:1351668]
83. Gpr126 Gpr126 318 0.905 - - 0.905 - - -
84. Ago4 ENSMUSG00000042500 110 0.905 - - 0.905 - - - argonaute RISC catalytic subunit 4 [Source:MGI Symbol;Acc:MGI:1924100]
85. Slpi ENSMUSG00000017002 14 0.904 - - - 0.904 - - secretory leukocyte peptidase inhibitor [Source:MGI Symbol;Acc:MGI:109297]
86. Gm11868 ENSMUSG00000050550 36 0.904 - - - 0.904 - - predicted gene 11868 [Source:MGI Symbol;Acc:MGI:3650507]
87. Prrt4 ENSMUSG00000079654 149 0.904 - - 0.904 - - - proline-rich transmembrane protein 4 [Source:MGI Symbol;Acc:MGI:2141677]
88. Gm6153 ENSMUSG00000090994 31 0.902 - - - 0.902 - - predicted gene 6153 [Source:MGI Symbol;Acc:MGI:3645798]
89. Cfi ENSMUSG00000058952 17 0.902 - - - 0.902 - - complement component factor i [Source:MGI Symbol;Acc:MGI:105937]
90. Lrrc3b ENSMUSG00000045201 96 0.901 - - 0.901 - - - leucine rich repeat containing 3B [Source:MGI Symbol;Acc:MGI:2384996]
91. Echs1 ENSMUSG00000025465 3845 0.9 - - 0.900 - - - enoyl Coenzyme A hydratase, short chain, 1, mitochondrial [Source:MGI Symbol;Acc:MGI:2136460]
92. Gm3636 ENSMUSG00000091754 235 0.9 - - 0.900 - - - predicted gene 3636 [Source:MGI Symbol;Acc:MGI:3781812]
93. Abcg5 ENSMUSG00000040505 25 0.899 - - 0.899 - - - ATP binding cassette subfamily G member 5 [Source:MGI Symbol;Acc:MGI:1351659]
94. Gna15 ENSMUSG00000034792 26 0.899 - - - 0.899 - - guanine nucleotide binding protein, alpha 15 [Source:MGI Symbol;Acc:MGI:95770]
95. Adam9 ENSMUSG00000031555 184 0.898 - - 0.898 - - - a disintegrin and metallopeptidase domain 9 (meltrin gamma) [Source:MGI Symbol;Acc:MGI:105376]
96. Gm10036 ENSMUSG00000058064 122 0.897 - - - 0.897 - - predicted gene 10036 [Source:MGI Symbol;Acc:MGI:3642334]
97. Ptprc ENSMUSG00000026395 57 0.896 - - - 0.896 - - protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
98. Mapkapk3 ENSMUSG00000032577 124 0.896 - - - 0.896 - - mitogen-activated protein kinase-activated protein kinase 3 [Source:MGI Symbol;Acc:MGI:2143163]
99. Grhl3 ENSMUSG00000037188 211 0.894 - - 0.894 - - - grainyhead like transcription factor 3 [Source:MGI Symbol;Acc:MGI:2655333]
100. Arhgdig ENSMUSG00000073433 60 0.893 - - - 0.893 - - Rho GDP dissociation inhibitor (GDI) gamma [Source:MGI Symbol;Acc:MGI:108430]

There are 436 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA