Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NUP50

Gene Name Gene ID Reads Annotation
NUP50 ENSGALG00000014222 11743 nucleoporin 50 [Source:NCBI gene;Acc:418240]











Genes with expression patterns similar to NUP50

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NUP50 ENSGALG00000014222 11743 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleoporin 50 [Source:NCBI gene;Acc:418240]
2. CYB5R2 ENSGALG00000032372 7967 1.706 - - - - - - 0.889 0.817 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
3. PTTG1 17936 1.634 - - - - - - 0.792 0.842 - - pituitary tumor-transforming 1, transcript variant X1
4. SEC63 ENSGALG00000015308 11596 1.629 - - - - - - 0.758 0.871 - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
5. IREB2 ENSGALG00000035462 10659 1.628 - - - - - - 0.759 0.869 - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
6. PDDC1 5179 1.623 - - - - - - 0.838 0.785 - - Parkinson disease 7 domain containing 1, transcript variant X6
7. ASUN ASUN 17129 1.593 - - - - - - 0.835 - - 0.758
8. RRP1B ENSGALG00000035696 12309 1.586 - - - - - - 0.863 0.723 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
9. SPCS1 ENSGALG00000001655 7718 1.579 - - - - - - 0.876 0.703 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
10. WRB ENSGALG00000016070 5199 1.56 - - - - - - 0.756 0.804 - - tryptophan rich basic protein [Source:NCBI gene;Acc:770415]
11. BET1L ENSGALG00000004172 5305 1.553 - - - - - - 0.836 0.717 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
12. MTMR8 ENSGALG00000007590 6022 1.545 - - - - - - 0.766 0.779 - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
13. MED27 ENSGALG00000003683 6808 1.544 - - - - - - 0.785 0.759 - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
14. ADRM1 ENSGALG00000005200 5417 1.527 - - - - - - 0.786 0.741 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
15. IGBP1 ENSGALG00000044628 9200 1.524 - - - - - - 0.778 0.746 - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
16. C11H16ORF80 C11H16ORF80 18673 1.517 - - - - - - 0.799 0.718 - -
17. ZSWIM7 ENSGALG00000023686 6459 1.514 - - - - - - 0.720 0.794 - - zinc finger SWIM-type containing 7 [Source:NCBI gene;Acc:417596]
18. SRBD1 ENSGALG00000009990 4568 1.51 - - - - - - 0.808 0.702 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
19. TM4SF18 4553 1.51 - - - - - - 0.793 0.717 - - transmembrane 4 L six family member 18, transcript variant X2
20. CAP1 ENSGALG00000036294 18598 1.503 - - - - - - 0.717 0.786 - - cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
21. RNH1 ENSGALG00000006904 14542 1.491 - - - - - - 0.741 0.750 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
22. DAD1 ENSGALG00000035626 32604 1.489 - - - - - - 0.748 0.741 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
23. SENP6 ENSGALG00000015901 8013 1.486 - - - - - - 0.722 0.764 - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
24. LOC112529965 ENSGALG00000010758 5395 1.482 - - - - - - 0.714 0.768 - - NADH-cytochrome b5 reductase-like
25. LIMS1 ENSGALG00000029970 7244 1.479 - - - - - - 0.731 0.748 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
26. PCNT ENSGALG00000007021 6428 1.473 - - - - - - 0.733 0.740 - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
27. TBC1D7 ENSGALG00000012731 4891 1.463 - - - - - - 0.729 0.734 - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
28. ACTR8 ENSGALG00000005385 3647 1.457 - - - - - - 0.745 0.712 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
29. IARS ENSGALG00000004813 12936 1.444 - - - - - - 0.734 0.710 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
30. PHLDB2 ENSGALG00000015377 8560 1.428 - - - - - - 0.720 0.708 - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
31. DSCR3 3583 1.427 - - - - - - 0.717 0.710 - - DSCR3 arrestin fold containing, transcript variant X1
32. NEK6 ENSGALG00000001118 20333 0.902 - - - - - - 0.902 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
33. YWHAZ ENSGALG00000031387 84985 0.901 - - - - - - 0.901 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
34. VBP1 VBP1 14482 0.896 - - - - - - 0.896 - - -
35. SMC4 ENSGALG00000009553 15715 0.894 - - - - - - 0.894 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
36. RNPS1 ENSGALG00000009288 13588 0.89 - - - - - - 0.890 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
37. WDR43 ENSGALG00000032529 12235 0.888 - - - - - - 0.888 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
38. NDUFV2 ENSGALG00000036625 29234 0.887 - - - - - - 0.887 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
39. IFRD1 ENSGALG00000009448 8865 0.884 - - - - - - 0.884 - - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
40. MAP3K7 ENSGALG00000015596 15164 0.883 - - - - - - 0.883 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
41. MED17 ENSGALG00000017218 5821 0.883 - - - - - - 0.883 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
42. NDUFA12 ENSGALG00000011325 19807 0.883 - - - - - - 0.883 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
43. PCNA ENSGALG00000029292 19163 0.882 - - - - - - - 0.882 - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
44. AP2A2 ENSGALG00000006799 13874 0.881 - - - - - - 0.881 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
45. RUVBL1 ENSGALG00000005931 9379 0.881 - - - - - - 0.881 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
46. ZNHIT3 ENSGALG00000026031 8652 0.879 - - - - - - 0.879 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
47. C1QBP ENSGALG00000001654 34814 0.878 - - - - - - 0.878 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
48. EIF4A2 ENSGALG00000008684 58507 0.875 - - - - - - 0.875 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
49. RAB11A ENSGALG00000007615 9154 0.874 - - - - - - 0.874 - - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
50. ACTR2 ENSGALG00000008779 17812 0.873 - - - - - - 0.873 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
51. TTC37 ENSGALG00000014670 5715 0.873 - - - - - - 0.873 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
52. BIRC6 ENSGALG00000010541 7999 0.871 - - - - - - 0.871 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
53. NASP ENSGALG00000010255 28423 0.87 - - - - - - 0.870 - - - nuclear autoantigenic sperm protein, transcript variant X3
54. HSPA4 ENSGALG00000040882 20966 0.87 - - - - - - 0.870 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
55. TMEM30A ENSGALG00000015904 8533 0.869 - - - - - - 0.869 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
56. CDC45 ENSGALG00000001616 8432 0.868 - - - - - - 0.868 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
57. DDX19B ENSGALG00000039967 49600 0.868 - - - - - - 0.868 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
58. MCM4 ENSGALG00000012915 13151 0.868 - - - - - - - 0.868 - - minichromosome maintenance complex component 4
59. ZNF593 ENSGALG00000000542 79105 0.868 - - - - - - 0.868 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
60. DGCR2 ENSGALG00000005891 8405 0.867 - - - - - - 0.867 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
61. MYEF2 ENSGALG00000032546 7436 0.867 - - - - - - - 0.867 - - myelin expression factor 2 [Source:NCBI gene;Acc:415432]
62. RBBP4 ENSGALG00000003522 72455 0.865 - - - - - - 0.865 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
63. RANGAP1 ENSGALG00000011966 20170 0.863 - - - - - - 0.863 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
64. RABGGTB ENSGALG00000011388 11654 0.862 - - - - - - 0.862 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
65. CASK ENSGALG00000042400 8485 0.862 - - - - - - 0.862 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
66. LSM5 ENSGALG00000041625 22307 0.862 - - - - - - 0.862 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
67. RANBP1 ENSGALG00000002107 17715 0.861 - - - - - - 0.861 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
68. PRPSAP2 ENSGALG00000005064 5549 0.86 - - - - - - 0.860 - - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
69. PPP1R2 ENSGALG00000029789 11594 0.859 - - - - - - 0.859 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
70. PLRG1 ENSGALG00000009257 8613 0.859 - - - - - - 0.859 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
71. CLNS1A ENSGALG00000008574 25675 0.859 - - - - - - 0.859 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
72. CZH9ORF80 CZH9ORF80 12760 0.858 - - - - - - 0.858 - - -
73. ATG4C ENSGALG00000010985 6102 0.857 - - - - - - 0.857 - - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
74. SNRNP40 ENSGALG00000000615 32298 0.857 - - - - - - 0.857 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
75. CRLS1 ENSGALG00000009214 8652 0.857 - - - - - - 0.857 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
76. UBE2D1 ENSGALG00000021213 5876 0.857 - - - - - - 0.857 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
77. PSMC3 ENSGALG00000008108 22922 0.857 - - - - - - 0.857 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
78. DKC1 ENSGALG00000005054 30350 0.856 - - - - - - 0.856 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
79. FCF1 ENSGALG00000010275 24928 0.856 - - - - - - 0.856 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
80. TOR1AIP1 ENSGALG00000029238 5843 0.856 - - - - - - 0.856 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
81. EIF2B3 ENSGALG00000010140 7992 0.856 - - - - - - 0.856 - - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
82. BMS1 ENSGALG00000002624 8339 0.856 - - - - - - 0.856 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
83. LIMD2 ENSGALG00000000529 30617 0.855 - - - - - - 0.855 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
84. GLRX3 ENSGALG00000010464 22578 0.855 - - - - - - 0.855 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
85. TXNDC17 ENSGALG00000027950 45004 0.855 - - - - - - 0.855 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
86. DERL1 ENSGALG00000033950 15074 0.855 - - - - - - 0.855 - - - derlin 1 [Source:NCBI gene;Acc:420350]
87. TTC27 ENSGALG00000010538 9685 0.854 - - - - - - 0.854 - - - tetratricopeptide repeat domain 27 [Source:NCBI gene;Acc:421462]
88. NOC4L ENSGALG00000002272 9644 0.854 - - - - - - 0.854 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
89. PEF1 ENSGALG00000040519 8522 0.853 - - - - - - 0.853 - - - penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]
90. PPID ENSGALG00000009451 7529 0.853 - - - - - - - 0.853 - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
91. ILF2 ENSGALG00000011570 23050 0.853 - - - - - - 0.853 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
92. AKAP1 ENSGALG00000005575 12051 0.853 - - - - - - 0.853 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
93. ANAPC16 ENSGALG00000004410 18001 0.852 - - - - - - - 0.852 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
94. TMEM184C ENSGALG00000010019 7856 0.852 - - - - - - 0.852 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
95. GABARAPL2 ENSGALG00000003208 9195 0.852 - - - - - - 0.852 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
96. PARP1 ENSGALG00000009228 39433 0.85 - - - - - - 0.850 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
97. SDHD ENSGALG00000007878 25129 0.849 - - - - - - 0.849 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
98. NUPL1 NUPL1 8197 0.849 - - - - - - 0.849 - - -
99. PAPSS1 ENSGALG00000010542 5631 0.849 - - - - - - 0.849 - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
100. KIF2C ENSGALG00000010120 8999 0.848 - - - - - - 0.848 - - - kinesin family member 2C, transcript variant X1

There are 907 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA