Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for NUCKS1

Gene Name Gene ID Reads Annotation
NUCKS1 ENSGALG00000000708 80882 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]











Genes with expression patterns similar to NUCKS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NUCKS1 ENSGALG00000000708 80882 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
2. MBD3 ENSGALG00000001101 37265 2.323 0.781 0.747 0.795 - - - - - - - methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
3. HMGN5 ENSGALG00000007131 171006 1.717 0.853 - - - - - 0.864 - - - high mobility group nucleosome binding domain 5, transcript variant X1
4. H3-IX_1 H3-IX_1 54392 1.582 0.850 - 0.732 - - - - - - -
5. NASP ENSGALG00000010255 28423 1.524 - - 0.796 - - 0.728 - - - - nuclear autoantigenic sperm protein, transcript variant X3
6. HMGB1 ENSGALG00000042875 83509 1.52 0.802 0.718 - - - - - - - - high mobility group box 1 [Source:NCBI gene;Acc:395724]
7. NSA2 ENSGALG00000014942 45193 0.992 - - - - - - 0.992 - - - NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
8. FN1 ENSGALG00000003578 37024 0.982 - - - - - - 0.982 - - - fibronectin 1 [Source:NCBI gene;Acc:396133]
9. AHCY ENSGALG00000033677 35555 0.981 - - - - - - 0.981 - - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
10. ATRX ENSGALG00000007843 34172 0.868 0.868 - - - - - - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
11. PRRX1 ENSGALG00000003324 4859 0.864 - - - - - - 0.864 - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
12. KIAA0922 4430 0.863 - - - - - - 0.863 - - - KIAA0922, transcript variant X4
13. MAPKAPK2 ENSGALG00000000883 6174 0.863 - - - - - - 0.863 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
14. HSPA14 ENSGALG00000035201 7372 0.863 - - - - - - 0.863 - - - heat shock protein family A (Hsp70) member 14
15. ARCN1 ENSGALG00000007430 21499 0.863 - - - - - - 0.863 - - - archain 1 [Source:NCBI gene;Acc:770561]
16. WDYHV1 ENSGALG00000030059 2961 0.862 - - - - - - 0.862 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
17. PRRC2B 1997 0.862 - - - - - - 0.862 - - - proline rich coiled-coil 2B, transcript variant X12
18. ECE-1 ECE-1 3057 0.862 - - - - - - 0.862 - - -
19. UTP14A ENSGALG00000024039 8532 0.862 - - - - - - 0.862 - - - UTP14A small subunit processome component
20. TDP2 ENSGALG00000013637 6595 0.862 - - - - - - 0.862 - - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
21. GBX-1 GBX-1 1430 0.862 - - - - - - 0.862 - - -
22. TUSC3 ENSGALG00000013674 2848 0.862 - - - - - - 0.862 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
23. NAP1L4 ENSGALG00000006446 10868 0.862 - - - - - - 0.862 - - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
24. RAP1GDS1 ENSGALG00000012222 10078 0.862 - - - - - - 0.862 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
25. THBS4 ENSGALG00000014804 4228 0.862 - - - - - - 0.862 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
26. C1H21ORF33 ENSGALG00000019171 8910 0.862 - - - - - - 0.862 - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
27. PIK3C2B ENSGALG00000037043 4522 0.862 - - - - - - 0.862 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
28. MRPS27 ENSGALG00000015002 6541 0.861 - - - - - - 0.861 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
29. ENSGALG00000021694 ENSGALG00000021694 26011 0.86 - - - - - - 0.860 - - -
30. EEF1E1 ENSGALG00000012781 22615 0.86 - - - - - - 0.860 - - - eukaryotic translation elongation factor 1 epsilon 1
31. ENSGALG00000001861 ENSGALG00000001861 10150 0.859 - - - - - - 0.859 - - -
32. DNMT3B ENSGALG00000041461 12959 0.858 - - - - - - 0.858 - - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
33. DHX36 ENSGALG00000043082 17619 0.858 - - - - - - 0.858 - - - DEAH-box helicase 36 [Source:HGNC Symbol;Acc:HGNC:14410]
34. RBBP6 ENSGALG00000006043 9708 0.858 0.858 - - - - - - - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
35. AURKAIP1 ENSGALG00000001555 14715 0.857 - - - - - - 0.857 - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
36. AP2M1 ENSGALG00000008432 16249 0.857 - - - - - - 0.857 - - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
37. CHMP4B ENSGALG00000002095 17422 0.855 - - - - - - 0.855 - - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
38. KIF2A ENSGALG00000014737 16391 0.854 - - - - - - 0.854 - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
39. BRT-1 BRT-1 26083 0.851 - - - - - - 0.851 - - -
40. UBE2C ENSGALG00000026380 27639 0.851 - - - - - - 0.851 - - - ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
41. gga-mir-762 ENSGALG00000025437 24823 0.851 - - - - - - 0.851 - - - gga-mir-762 [Source:miRBase;Acc:MI0008209]
42. CWC15 ENSGALG00000017207 30922 0.85 - - - - - - 0.850 - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
43. ANKRD11 ENSGALG00000006222 12327 0.85 0.850 - - - - - - - - - ankyrin repeat domain 11, transcript variant X2
44. PSMA7 ENSGALG00000030411 42436 0.843 - - - - - - 0.843 - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
45. ATF4 ENSGALG00000012135 53361 0.842 - - - - - - 0.842 - - - activating transcription factor 4 [Source:NCBI gene;Acc:395693]
46. MTX2 ENSGALG00000009264 17304 0.84 - - - - - - 0.840 - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
47. RPL39 ENSGALG00000008620 63315 0.84 - - - - - - 0.840 - - - ribosomal protein L39 [Source:NCBI gene;Acc:374132]
48. TRA2B ENSGALG00000006531 40566 0.839 - - - - - - 0.839 - - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
49. SESTD1 ENSGALG00000009031 13090 0.839 - - - - 0.839 - - - - - SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]
50. CBX3 ENSGALG00000011038 40977 0.839 - - - - - - 0.839 - - - chromobox 3 [Source:NCBI gene;Acc:395355]
51. DYNLRB1 ENSGALG00000034509 28361 0.838 - - - - - - 0.838 - - - dynein light chain roadblock-type 1
52. THOC2 ENSGALG00000008507 9501 0.835 0.835 - - - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
53. MAP1B ENSGALG00000014999 6288 0.825 0.825 - - - - - - - - - microtubule associated protein 1B
54. EEF2 ENSGALG00000033884 62036 0.818 0.818 - - - - - - - - - eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
55. DDX46 ENSGALG00000006404 8765 0.811 0.811 - - - - - - - - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
56. MYH10 ENSGALG00000001183 26889 0.809 - - - - 0.809 - - - - - myosin, heavy chain 10, non-muscle [Source:NCBI gene;Acc:396465]
57. PPIG ENSGALG00000009839 24114 0.8 0.800 - - - - - - - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
58. PSMD1 ENSGALG00000007664 7609 0.797 0.797 - - - - - - - - - proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]
59. BAZ2B ENSGALG00000012579 5525 0.792 0.792 - - - - - - - - - bromodomain adjacent to zinc finger domain 2B [Source:NCBI gene;Acc:395400]
60. TOP2A ENSGALG00000003922 7726 0.791 0.791 - - - - - - - - - topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]
61. CCAR1 ENSGALG00000004108 13219 0.791 0.791 - - - - - - - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
62. PTGFRN ENSGALG00000015464 14584 0.79 0.790 - - - - - - - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
63. SREK1 ENSGALG00000014775 13961 0.788 0.788 - - - - - - - - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
64. MTDH ENSGALG00000034050 9525 0.786 0.786 - - - - - - - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
65. CAPZA1 ENSGALG00000001547 24242 0.784 0.784 - - - - - - - - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
66. EIF5B ENSGALG00000016764 30681 0.784 0.784 - - - - - - - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
67. TCERG1 ENSGALG00000007528 6346 0.784 0.784 - - - - - - - - - transcription elongation regulator 1 [Source:HGNC Symbol;Acc:HGNC:15630]
68. SERBP1 ENSGALG00000011229 30489 0.778 0.778 - - - - - - - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
69. RTF1 ENSGALG00000008595 31933 0.778 0.778 - - - - - - - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:HGNC Symbol;Acc:HGNC:28996]
70. METAP2 ENSGALG00000011377 16311 0.778 - - - - - - - 0.778 - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
71. ZNF644 ENSGALG00000034253 28348 0.775 0.775 - - - - - - - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
72. SRSF11 ENSGALG00000011305 10435 0.774 0.774 - - - - - - - - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
73. LOC427439 ENSGALG00000003605 9312 0.774 0.774 - - - - - - - - - Nipped-B homolog-like, transcript variant X1
74. C5orf24 ENSGALG00000006371 1573 0.773 0.773 - - - - - - - - - chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
75. PUM1 ENSGALG00000042598 9392 0.77 0.770 - - - - - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
76. AKAP9 ENSGALG00000040724 7446 0.77 0.770 - - - - - - - - - A-kinase anchoring protein 9 [Source:NCBI gene;Acc:395695]
77. HISTH1 ENSGALG00000011747 16825 0.765 0.765 - - - - - - - - - histone H1
78. PABPC1 ENSGALG00000030280 23934 0.765 0.765 - - - - - - - - - poly(A) binding protein cytoplasmic 1 [Source:NCBI gene;Acc:430997]
79. REXO1 ENSGALG00000001043 3179 0.764 0.764 - - - - - - - - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
80. RPL19 ENSGALG00000001658 277294 0.763 - - - - - - 0.763 - - - ribosomal protein L19 [Source:NCBI gene;Acc:420003]
81. ARID4A ENSGALG00000012037 8554 0.76 0.760 - - - - - - - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
82. DNAJC10 ENSGALG00000008862 3114 0.757 0.757 - - - - - - - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
83. ANP32B ENSGALG00000037483 190705 0.755 - - - - - - 0.755 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
84. ITFG1 ENSGALG00000004049 2934 0.755 0.755 - - - - - - - - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
85. NAP1L1 ENSGALG00000010238 14506 0.753 0.753 - - - - - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
86. RPS13 ENSGALG00000006096 170517 0.751 - - - - 0.751 - - - - - ribosomal protein S13 [Source:NCBI gene;Acc:414782]
87. UBE2D1 ENSGALG00000021213 5876 0.751 - - - - 0.751 - - - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
88. TBL1X ENSGALG00000040006 28597 0.749 0.749 - - - - - - - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
89. PPP4R2 ENSGALG00000007810 15127 0.749 - - - - 0.749 - - - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
90. PNISR ENSGALG00000015483 7711 0.749 0.749 - - - - - - - - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
91. UBE2V1 ENSGALG00000008015 17947 0.748 0.748 - - - - - - - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
92. ATP5F1 80590 0.748 - - - - 0.748 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
93. APP ENSGALG00000015770 9438 0.747 0.747 - - - - - - - - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
94. GALNT7 ENSGALG00000010744 8645 0.746 0.746 - - - - - - - - - polypeptide N-acetylgalactosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4129]
95. SMC2 ENSGALG00000015691 34013 0.743 0.743 - - - - - - - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
96. MDN1 ENSGALG00000015733 2352 0.743 - - 0.743 - - - - - - - midasin AAA ATPase 1, transcript variant X1
97. ESF1 ENSGALG00000034768 8610 0.742 0.742 - - - - - - - - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
98. SP3 ENSGALG00000031796 8997 0.74 0.740 - - - - - - - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
99. ROCK1 ENSGALG00000014922 4020 0.739 0.739 - - - - - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
100. PNRC1 ENSGALG00000015780 75894 0.739 0.739 - - - - - - - - - proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]

There are 48 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA