Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NUBP1

Gene Name Gene ID Reads Annotation
NUBP1 ENSGALG00000007241 3791 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]











Genes with expression patterns similar to NUBP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NUBP1 ENSGALG00000007241 3791 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
2. ASH2L ENSGALG00000003233 4814 2.441 - - 0.890 - - - 0.819 0.732 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
3. SPDL1 ENSGALG00000001942 4403 2.389 - - 0.822 - - - 0.729 - - 0.838 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
4. SMC4 ENSGALG00000009553 15715 2.339 - - 0.844 - - - 0.719 - - 0.776 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
5. TRRAP ENSGALG00000003596 6032 2.327 - - - - - - 0.784 0.808 - 0.735 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
6. PPFIA1 ENSGALG00000035774 5258 2.299 - - - 0.701 - - - 0.738 - 0.860 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
7. GPR162 ENSGALG00000022926 7181 2.193 - - - - - - 0.700 0.729 - 0.764 G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
8. KIF11 ENSGALG00000030597 5528 2.169 - - 0.700 - - - - 0.704 - 0.765 kinesin family member 11 [Source:NCBI gene;Acc:423809]
9. SPTSSA ENSGALG00000025755 3361 2.163 - - - - - - 0.726 0.700 - 0.737 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
10. WHSC1 1712 1.717 - - 0.913 - - - - - - 0.804 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
11. NEK1 ENSGALG00000009683 4305 1.707 - - 0.880 - - - 0.827 - - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
12. DBN1 ENSGALG00000033405 216 1.684 - - 0.940 0.744 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
13. HYAL3 ENSGALG00000029000 712 1.669 - - 0.889 - - - - - - 0.780 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
14. CNTRL ENSGALG00000001513 1773 1.637 - - 0.838 - - - - - - 0.799 centriolin [Source:NCBI gene;Acc:417121]
15. KDM6A ENSGALG00000016217 2302 1.636 - - 0.895 - - - - 0.741 - - lysine demethylase 6A, transcript variant X14
16. SLK ENSGALG00000008318 2220 1.636 - - 0.896 - - - - - - 0.740 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
17. NCAPD2 ENSGALG00000039448 8658 1.635 - - 0.913 - - - 0.722 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
18. SESN1 ENSGALG00000015286 2387 1.633 - - 0.885 0.748 - - - - - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
19. CCNA2 ENSGALG00000011881 2574 1.632 - - 0.827 - - - - - - 0.805 cyclin A2 [Source:NCBI gene;Acc:396172]
20. LGALS1 ENSGALG00000012420 13993 1.63 - - 0.919 - - - 0.711 - - - galectin 1 [Source:NCBI gene;Acc:396491]
21. BAG5 ENSGALG00000031062 4498 1.628 - - 0.906 0.722 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
22. NDUFC2 ENSGALG00000029172 26136 1.618 - - 0.836 - - - 0.782 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
23. RBBP8 ENSGALG00000014982 3255 1.613 - - 0.853 - - - - - - 0.760 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
24. SELM SELM 6366 1.612 - - 0.893 - - - - 0.719 - -
25. GTF2E1 ENSGALG00000042320 7712 1.611 - - 0.911 - 0.700 - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
26. CDK8 ENSGALG00000017104 5956 1.604 - - - 0.735 - - 0.869 - - - cyclin dependent kinase 8, transcript variant X4
27. TWSG1 ENSGALG00000008400 1869 1.603 - - 0.865 - - - - - - 0.738 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
28. TIAR TIAR 2471 1.602 - - 0.891 - - - - - - 0.711
29. URM1 ENSGALG00000004971 17880 1.601 - - 0.875 - - - - 0.726 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
30. CPT2 ENSGALG00000010681 3211 1.599 - - 0.786 - - - - - - 0.813 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
31. PRPF38B ENSGALG00000001972 2009 1.599 - - 0.864 - - - - - - 0.735 pre-mRNA processing factor 38B
32. HPS5 ENSGALG00000027716 2466 1.593 - - 0.870 0.723 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
33. KLHL21 ENSGALG00000035211 6145 1.59 - - 0.781 - - - 0.809 - - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
34. BTG1L ENSGALG00000004676 2293 1.59 - - 0.855 - - - - - - 0.735 protein BTG1-like
35. ERCC6 ENSGALG00000006254 3452 1.588 - - 0.730 - - - - - - 0.858 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
36. PIGK ENSGALG00000009015 7942 1.588 - - 0.860 - - - 0.728 - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
37. GGA.31975 GGA.31975 8825 1.586 - - - - - - 0.739 - - 0.847
38. SHMT1 ENSGALG00000005046 1430 1.586 - - 0.883 - - - - 0.703 - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
39. SNAPC5 ENSGALG00000007695 4117 1.585 - - 0.869 - - - 0.716 - - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
40. ADIPOR2 ENSGALG00000035533 6523 1.583 - - 0.788 - - - - - - 0.795 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
41. HINT3 ENSGALG00000044342 5674 1.581 - - 0.862 0.719 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
42. GABARAPL2 ENSGALG00000003208 9195 1.58 - - 0.840 - - - 0.740 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
43. ECI2 ENSGALG00000012809 3692 1.579 - - - - - - 0.766 - - 0.813 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
44. ATP6V0C ENSGALG00000009229 125870 1.578 - - 0.827 - - - - - - 0.751 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
45. ZC3H11A ENSGALG00000000541 2712 1.578 - - 0.845 - - - - - - 0.733 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
46. COQ3 ENSGALG00000015486 3508 1.577 - - 0.824 - - - - 0.753 - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
47. PANK1 ENSGALG00000006431 2910 1.574 - - 0.830 0.744 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
48. MRPL40 ENSGALG00000001587 20893 1.573 - - - 0.774 - - 0.799 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
49. SP3 ENSGALG00000031796 8997 1.572 - - 0.848 - - - 0.724 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
50. NUPL1 NUPL1 8197 1.572 - - 0.829 - - - 0.743 - - -
51. TMEM167A ENSGALG00000027332 13862 1.57 - - 0.802 - - - 0.768 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
52. WDR3 ENSGALG00000014791 5856 1.568 - - 0.851 - - - - 0.717 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
53. PCNP ENSGALG00000015330 15750 1.565 - - - - 0.769 - - - - 0.796 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
54. ITGA9 ENSGALG00000029378 415 1.565 - - - 0.748 - - - - - 0.817 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
55. FECH ENSGALG00000038461 3491 1.55 - - 0.803 - - - - - - 0.747 ferrochelatase [Source:NCBI gene;Acc:374020]
56. RAD50 ENSGALG00000006794 4308 1.549 - - 0.762 - - - - - - 0.787 RAD50 double strand break repair protein, transcript variant X4
57. PROM1 ENSGALG00000014496 2494 1.544 - - - - - - - 0.733 - 0.811 prominin 1 [Source:NCBI gene;Acc:422825]
58. MRPL50 ENSGALG00000015543 11649 1.539 - - - - - - 0.731 - - 0.808 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
59. HSPE1 ENSGALG00000009070 87567 1.535 - - 0.809 - - - - - - 0.726 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
60. NEO1 ENSGALG00000001774 10165 1.533 - - - - - - 0.778 - - 0.755 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
61. EIF2B4 ENSGALG00000033575 3801 1.53 - - 0.745 - - - 0.785 - - - eukaryotic translation initiation factor 2B subunit delta [Source:HGNC Symbol;Acc:HGNC:3260]
62. CCNI ENSGALG00000011457 3203 1.528 - - 0.815 0.713 - - - - - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
63. WDR53 ENSGALG00000006395 4938 1.528 - - - - - - 0.752 - - 0.776 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
64. PIK3IP1 ENSGALG00000006942 8388 1.524 - - 0.794 - - - 0.730 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
65. TCOF1 ENSGALG00000005535 24554 1.522 - - 0.767 - - - - - - 0.755 treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
66. ING3 ENSGALG00000009023 4961 1.521 - - 0.774 - - - - 0.747 - - inhibitor of growth family member 3 [Source:NCBI gene;Acc:417762]
67. TIMM44 ENSGALG00000000352 5527 1.52 - - 0.792 - - - - 0.728 - - translocase of inner mitochondrial membrane 44 [Source:NCBI gene;Acc:420053]
68. SLC39A6 ENSGALG00000013209 1754 1.516 - - 0.801 - - - - - - 0.715 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
69. SPCS1 ENSGALG00000001655 7718 1.516 - - 0.750 - - - - 0.766 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
70. NARS ENSGALG00000040506 9506 1.516 - - - - - - - 0.723 - 0.793 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
71. UPF2 ENSGALG00000033772 9548 1.514 - - - - - - 0.767 - - 0.747 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
72. PSMD13 ENSGALG00000043684 14720 1.514 - - 0.796 - - - - 0.718 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
73. SLC25A20 ENSGALG00000028227 7685 1.51 - - 0.758 - - - 0.752 - - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
74. ELMOD1 ENSGALG00000017169 2303 1.509 - - 0.749 0.760 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
75. DAD1 ENSGALG00000035626 32604 1.507 - - - - - - 0.737 0.770 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
76. SLC30A5 ENSGALG00000014787 5573 1.506 - - - - - - 0.763 - - 0.743 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
77. EXOSC10 ENSGALG00000003086 3223 1.506 - - - - - - 0.745 0.761 - - exosome component 10 [Source:NCBI gene;Acc:419454]
78. CCDC88A ENSGALG00000043587 2208 1.505 - - - - 0.740 - - - - 0.765 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
79. CMPK CMPK 9569 1.503 - - - - - - 0.756 - - 0.747
80. ISCA1 ENSGALG00000012606 10342 1.499 - - 0.772 - 0.727 - - - - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
81. CKAP2 ENSGALG00000017025 25020 1.499 - - 0.724 - - - - - - 0.775 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
82. KIF21A ENSGALG00000007098 5919 1.499 - - 0.724 - 0.775 - - - - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
83. MCPH1 ENSGALG00000016332 2097 1.499 - - - - - - - 0.768 - 0.731 microcephalin 1 [Source:NCBI gene;Acc:100125976]
84. C1H21ORF91 ENSGALG00000028290 5550 1.493 - - - - - - - 0.700 - 0.793 chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
85. COG6 ENSGALG00000017035 2777 1.493 - - - - - - - 0.721 - 0.772 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
86. RRP36 ENSGALG00000028056 7560 1.492 - - - - - - 0.785 0.707 - - ribosomal RNA processing 36
87. FANCL ENSGALG00000030022 7423 1.491 - - - - - - - 0.726 - 0.765 FA complementation group L [Source:NCBI gene;Acc:421202]
88. PAXIP1 ENSGALG00000036064 3120 1.488 - - - 0.717 - - 0.771 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
89. R3HDM1 ENSGALG00000012246 6580 1.487 - - - - - - 0.776 0.711 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
90. HEXA ENSGALG00000043828 4789 1.486 - - - - - - 0.741 - - 0.745 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
91. TMEM165 ENSGALG00000027886 5468 1.485 - - - - - - - 0.743 - 0.742 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
92. MRPL2 ENSGALG00000008597 16500 1.484 - - - - 0.704 - - 0.780 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
93. PTTG1 17936 1.484 - - 0.751 - - - 0.733 - - - pituitary tumor-transforming 1, transcript variant X1
94. GTF2H3 ENSGALG00000023682 9914 1.483 - - 0.750 - - - 0.733 - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
95. GSPT1 15580 1.482 - - 0.780 - - - 0.702 - - - G1 to S phase transition 1, transcript variant X1
96. FZD6 ENSGALG00000030626 3336 1.482 - - 0.727 - - - - - - 0.755 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
97. RABEP1 ENSGALG00000001737 2650 1.481 - - - - - - 0.764 0.717 - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
98. ENSGALG00000028992 ENSGALG00000028992 185077 1.48 - - 0.742 - - - - - - 0.738
99. PIGT ENSGALG00000003909 3804 1.479 - - - - - - 0.706 - - 0.773 phosphatidylinositol glycan anchor biosynthesis class T [Source:HGNC Symbol;Acc:HGNC:14938]
100. HCCS ENSGALG00000005571 4939 1.477 - - 0.734 - - - - 0.743 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]

There are 1191 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA