Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NTN3

Gene Name Gene ID Reads Annotation
NTN3 ENSGALG00000029072 1368 netrin 1 [Source:NCBI gene;Acc:396387]











Genes with expression patterns similar to NTN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NTN3 ENSGALG00000029072 1368 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 netrin 1 [Source:NCBI gene;Acc:396387]
2. RGMA ENSGALG00000039173 12874 3.352 - - 0.778 0.884 - 0.869 - - - 0.821 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
3. NHLH1 ENSGALG00000025817 1617 2.491 - - 0.871 - - 0.835 - - - 0.785 nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
4. ENSGALG00000027002 ENSGALG00000027002 7570 2.31 - - 0.887 0.700 - - 0.723 - - -
5. TAGLN3 ENSGALG00000015379 7865 1.679 - - 0.881 - - - - - - 0.798 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
6. TMSB10 TMSB10 518 1.622 - - 0.858 - - - - - - 0.764
7. CRMP1B CRMP1B 18633 1.617 - - 0.821 - - - - - - 0.796
8. MARCKSL1 ENSGALG00000032335 88728 1.599 - - 0.850 - - - - - - 0.749 MARCKS like 1 [Source:NCBI gene;Acc:770764]
9. PRDM8 ENSGALG00000038372 928 1.583 - - 0.756 - - 0.827 - - - - PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
10. GPM6A ENSGALG00000043480 2133 1.539 - - 0.779 - - - - - - 0.760 glycoprotein M6A [Source:NCBI gene;Acc:422569]
11. HPCAL1 ENSGALG00000016443 6633 1.522 - - 0.731 - - 0.791 - - - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
12. CRABP-I ENSGALG00000003193 67258 1.511 - - 0.808 0.703 - - - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
13. LOC419390 ENSGALG00000001136 607 1.509 - - 0.771 - - - - - 0.738 - hairy and enhancer of split 5-like, transcript variant X1
14. MYOZ2 ENSGALG00000011991 714 1.499 - - 0.733 - - - - - - 0.766 myozenin 2 [Source:NCBI gene;Acc:422682]
15. TUBB2B ENSGALG00000012821 41535 1.485 - - 0.709 - - - - - - 0.776 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
16. EN1 ENSGALG00000042389 3051 1.456 - - - - 0.703 - - - - 0.753 engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
17. RIPPLY2 ENSGALG00000015845 34 1.437 - - - - - 0.717 - 0.720 - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
18. ACTC1 ENSGALG00000009844 20914 1.436 - - - 0.721 - - - - - 0.715 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
19. MYF5 ENSGALG00000028091 1965 1.416 - - - - - 0.709 0.707 - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
20. WSCD2 ENSGALG00000004849 477 0.898 - - 0.898 - - - - - - - WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
21. TCF15 ENSGALG00000026276 3646 0.842 - - - - - 0.842 - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
22. HES5 ENSGALG00000001141 6514 0.839 - - 0.839 - - - - - - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
23. CLVS1 ENSGALG00000043172 56 0.835 - - 0.835 - - - - - - - clavesin 1
24. OVST_1 ENSGALG00000011930 9 0.83 - - - - - - - 0.830 - - ovostatin [Source:NCBI gene;Acc:396151]
25. CKV6.3 CKV6.3 13 0.828 - - - - - - - 0.828 - -
26. LOC422147 ENSGALG00000004113 30 0.824 - - - - - - - 0.824 - - putative P2Y purinoceptor 10-like
27. SYNPR ENSGALG00000007284 1368 0.818 - - - - - - - - - 0.818 synaptoporin [Source:NCBI gene;Acc:396359]
28. NGFR ENSGALG00000035950 13452 0.815 - - - - - 0.815 - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
29. ENSGALG00000027373 ENSGALG00000027373 2129 0.814 - - 0.814 - - - - - - -
30. PAX-6 PAX-6 2650 0.81 - - 0.810 - - - - - - -
31. MYL1 ENSGALG00000002907 1300 0.809 - - - - - - - - - 0.809 myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
32. CKB ENSGALG00000011511 2100 0.808 - - - - - - - - - 0.808 creatine kinase B [Source:NCBI gene;Acc:396248]
33. CSPG5 ENSGALG00000032184 991 0.804 - - 0.804 - - - - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
34. MIF ENSGALG00000006326 109683 0.8 - - 0.800 - - - - - - - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
35. FGF8 ENSGALG00000007706 32 0.799 - - - - - 0.799 - - - - fibroblast growth factor 8 [Source:NCBI gene;Acc:396313]
36. GABRG2 ENSGALG00000038042 211 0.797 - - 0.797 - - - - - - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
37. HOXB-7 HOXB-7 2066 0.792 - - 0.792 - - - - - - -
38. SORCS1 ENSGALG00000008465 468 0.792 - - - - - - 0.792 - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
39. RBM38 ENSGALG00000026081 7115 0.789 - - - - - 0.789 - - - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
40. FAM110A ENSGALG00000046425 5558 0.787 - - - - - - - - - 0.787 family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
41. GADD45_1 GADD45_1 1433 0.786 - - - - - - - - - 0.786
42. GHR ENSGALG00000014855 131 0.785 - - - - - - - 0.785 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
43. NRCAM ENSGALG00000009514 490 0.784 - - - - - - - - - 0.784 neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
44. RNF25 ENSGALG00000011375 51 0.782 - - - - - - - 0.782 - - ring finger protein 25 [Source:NCBI gene;Acc:424211]
45. ZBTB46 ENSGALG00000006062 133 0.782 - - - - - - - 0.782 - - zinc finger and BTB domain containing 46 [Source:HGNC Symbol;Acc:HGNC:16094]
46. SOUL ENSGALG00000012464 52 0.78 - - - - - - - 0.780 - - SOUL protein [Source:NCBI gene;Acc:395567]
47. CNTN2 ENSGALG00000000653 219 0.773 - - - - - - - - - 0.773 contactin 2 [Source:NCBI gene;Acc:419825]
48. LFNG ENSGALG00000038515 5178 0.773 - - 0.773 - - - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
49. ALDH6 ALDH6 771 0.771 - - - - - 0.771 - - - -
50. SALL1 ENSGALG00000039238 3740 0.769 - - 0.769 - - - - - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
51. PLPPR1 ENSGALG00000015542 3179 0.768 - - 0.768 - - - - - - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
52. ERMN ENSGALG00000020575 46 0.766 - - - - - - - 0.766 - - ermin [Source:HGNC Symbol;Acc:HGNC:29208]
53. PTH1R ENSGALG00000005476 15 0.766 - - - - - - - 0.766 - - parathyroid hormone 1 receptor [Source:NCBI gene;Acc:420401]
54. ZNF512B ENSGALG00000006013 100 0.764 - - - - - - - 0.764 - - zinc finger protein 512B [Source:NCBI gene;Acc:771616]
55. RTKN2 ENSGALG00000002980 50 0.764 - - - - - - - 0.764 - - rhotekin 2 [Source:NCBI gene;Acc:423660]
56. CD28 ENSGALG00000008669 2 0.764 - - - - - - - 0.764 - - CD28 molecule [Source:NCBI gene;Acc:396249]
57. MYO10L ENSGALG00000011172 80 0.764 - - - - - - - 0.764 - - myosin-X-like, transcript variant X2
58. CCNI2 ENSGALG00000023812 21 0.764 - - - - - - - 0.764 - - cyclin I family member 2, transcript variant X2
59. TPCN1 ENSGALG00000008357 28 0.764 - - - - - - - 0.764 - - two pore segment channel 1 [Source:HGNC Symbol;Acc:HGNC:18182]
60. ENSGALG00000022901 ENSGALG00000022901 19 0.764 - - - - - - - 0.764 - -
61. RQCD1 RQCD1 110 0.764 - - - - - - - 0.764 - -
62. PROCA1 668 0.764 - - 0.764 - - - - - - - protein interacting with cyclin A1
63. NES ENSGALG00000013239 1708 0.763 - - - - - 0.763 - - - - nestin [Source:NCBI gene;Acc:395890]
64. NEURL2 ENSGALG00000006854 22 0.761 - - - - - - - 0.761 - - neuralized E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:16156]
65. CHN1 ENSGALG00000009293 6415 0.761 - - - - - - - - - 0.761 chimerin 1 [Source:NCBI gene;Acc:429021]
66. ITGAV ENSGALG00000002655 26 0.76 - - - - - - - 0.760 - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
67. ACTA1 ENSGALG00000011086 2543 0.759 - - - 0.759 - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
68. NDFIP2 ENSGALG00000016909 25 0.758 - - - - - - - 0.758 - - Nedd4 family interacting protein 2 [Source:NCBI gene;Acc:418803]
69. PKM ENSGALG00000001992 93960 0.758 - - 0.758 - - - - - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
70. MYBPC1 ENSGALG00000012783 317 0.758 - - - 0.758 - - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
71. TMEM108 ENSGALG00000036412 2903 0.755 - - - - - 0.755 - - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
72. PROX1 ENSGALG00000009791 1184 0.753 - - 0.753 - - - - - - - prospero homeobox 1 [Source:NCBI gene;Acc:395802]
73. HSPB8 ENSGALG00000007383 5333 0.753 - - - - - - - - - 0.753 heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
74. XIRP1 ENSGALG00000006025 729 0.753 - - - - - - - - - 0.753 xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
75. TTYH2 ENSGALG00000026940 15628 0.748 - - - - - - - - - 0.748 tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
76. UTS2D UTS2D 2246 0.748 - - - - - - - 0.748 - -
77. ATP6AP1L ENSGALG00000015618 476 0.747 - - - - - 0.747 - - - - ATPase H+ transporting accessory protein 1 like [Source:HGNC Symbol;Acc:HGNC:28091]
78. HGFAC ENSGALG00000015623 1 0.746 - - - - - - - 0.746 - - HGF activator [Source:HGNC Symbol;Acc:HGNC:4894]
79. ELAVL2 ENSGALG00000015799 585 0.745 - - - - - - - - - 0.745 ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
80. ALDOC ENSGALG00000026077 106910 0.745 - - 0.745 - - - - - - - aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
81. NRG4 ENSGALG00000002952 1440 0.745 - - - - - - 0.745 - - - neuregulin 4 [Source:NCBI gene;Acc:415354]
82. MAP2 ENSGALG00000002789 6597 0.745 - - - - - - - - - 0.745 microtubule associated protein 2, transcript variant X33
83. CERCAM ENSGALG00000004986 5158 0.744 - - 0.744 - - - - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
84. ENSGALG00000021487 ENSGALG00000021487 1218 0.744 - - - - - - 0.744 - - -
85. PAX1 ENSGALG00000039040 3339 0.743 - - - - - 0.743 - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
86. SNORA65 SNORA65 9 0.743 - - - - - 0.743 - - - -
87. RTN1 ENSGALG00000012006 2438 0.743 - - 0.743 - - - - - - - reticulon 1 [Source:NCBI gene;Acc:378791]
88. KCNMB4 ENSGALG00000010044 377 0.742 - - - - - 0.742 - - - - potassium calcium-activated channel subfamily M regulatory beta subunit 4 [Source:NCBI gene;Acc:417852]
89. ENSGALG00000026461 ENSGALG00000026461 61 0.741 - - - - - - - 0.741 - -
90. PTPRZ1 ENSGALG00000040114 3410 0.739 - - 0.739 - - - - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
91. GPSM1 ENSGALG00000001797 943 0.737 - - - - - 0.737 - - - - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
92. MYOM3 ENSGALG00000004155 86 0.736 - - - - - - - - - 0.736 myomesin 3 [Source:HGNC Symbol;Acc:HGNC:26679]
93. POLG2 ENSGALG00000003520 702 0.736 - - - - - - 0.736 - - - DNA polymerase gamma 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9180]
94. NPM3 ENSGALG00000032329 21138 0.736 - - 0.736 - - - - - - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
95. SPHKAP ENSGALG00000002974 80 0.735 - - - 0.735 - - - - - - SPHK1 interactor, AKAP domain containing [Source:NCBI gene;Acc:424789]
96. FABP5 ENSGALG00000041344 3984 0.734 - - - - - 0.734 - - - - fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
97. CDH22 ENSGALG00000007211 250 0.733 - - 0.733 - - - - - - - cadherin 22 [Source:HGNC Symbol;Acc:HGNC:13251]
98. ENSGALG00000003203 ENSGALG00000003203 4 0.731 - - - - - 0.731 - - - -
99. TSPAN5 ENSGALG00000012227 8703 0.73 - - - - - - 0.730 - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
100. TPM1 ENSGALG00000003521 11894 0.728 - - - 0.728 - - - - - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]

There are 101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA