Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NTF3

Gene Name Gene ID Reads Annotation
NTF3 ENSGALG00000027299 72 neurotrophin 3 [Source:NCBI gene;Acc:428099]











Genes with expression patterns similar to NTF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NTF3 ENSGALG00000027299 72 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 neurotrophin 3 [Source:NCBI gene;Acc:428099]
2. ARHGAP15 ENSGALG00000012421 58 1.559 - - - - - - - 0.781 - 0.778 Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
3. LSM14B ENSGALG00000005125 31 1.477 - - - - - 0.725 - - - 0.752 LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
4. C6orf163 ENSGALG00000028653 39 1.443 - - - - 0.708 0.735 - - - - chromosome 6 open reading frame 163 [Source:HGNC Symbol;Acc:HGNC:21403]
5. HDAC9 ENSGALG00000010854 49 0.9 - - - - - - - - - 0.900 histone deacetylase 9 [Source:NCBI gene;Acc:420599]
6. EX-FABP EX-FABP 516 0.884 - - - - - 0.884 - - - -
7. SPINK4 ENSGALG00000043964 50 0.878 - - - - - - - 0.878 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
8. COL23A1 ENSGALG00000006708 181 0.862 - - - - - - - - - 0.862 collagen type XXIII alpha 1 chain, transcript variant X1
9. FRRS1 ENSGALG00000005418 332 0.857 - - - - - - - - - 0.857 ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
10. FER1L6 ENSGALG00000033783 196 0.857 - - - - - 0.857 - - - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
11. COL25A1 ENSGALG00000039411 5 0.841 - - - - - - - - - 0.841 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
12. LYG2 ENSGALG00000016761 7 0.841 - - - - - - - - - 0.841 lysozyme g2 [Source:NCBI gene;Acc:395708]
13. ENSGALG00000026222 ENSGALG00000026222 3 0.841 - - - - - - - - - 0.841
14. BF1 ENSGALG00000033932 18 0.841 - - - - - - - - - 0.841 MHC BF1 class I [Source:NCBI gene;Acc:693260]
15. CKV6.3 CKV6.3 13 0.841 - - - - - - - - - 0.841
16. SNORA53 SNORA53 6 0.841 - - - - - - - - - 0.841
17. XKRX ENSGALG00000006637 13 0.841 - - - - - - - - - 0.841 XK related, X-linked, transcript variant X4
18. CUBN ENSGALG00000008704 21 0.841 - - - - - - - - - 0.841 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
19. VIPR1 ENSGALG00000005259 3 0.841 - - - - - - - - - 0.841 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
20. SNAP23 ENSGALG00000009097 36 0.84 - - - - - - - 0.840 - - synaptosome associated protein 23 [Source:NCBI gene;Acc:423235]
21. KIAA1549L ENSGALG00000012020 33 0.839 - - - - - - - - - 0.839 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
22. CFAP99 ENSGALG00000015685 32 0.837 - - - - - - - - - 0.837 cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
23. ZMYM3 ENSGALG00000005533 2927 0.833 - - - - - 0.833 - - - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
24. FAM219A ENSGALG00000005821 52 0.832 - - - - - - - 0.832 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
25. BRINP3 ENSGALG00000033407 40 0.83 - - - - - - - - - 0.830 BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
26. ENPP3 ENSGALG00000037587 25 0.827 - - - - - - - 0.827 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
27. EPB41L4A ENSGALG00000000234 113 0.827 - - - - - - - 0.827 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
28. SORL1 ENSGALG00000006598 39 0.825 - - - - - - - - - 0.825 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
29. MANSC4 32 0.824 - - - - - - - - - 0.824 MANSC domain containing 4, transcript variant X1
30. FMN1 ENSGALG00000009723 100 0.824 - - - - - - - - - 0.824 formin 1 [Source:NCBI gene;Acc:386747]
31. ENTPD5 ENSGALG00000010202 69 0.822 - - - - - - - - - 0.822 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
32. SLC7A2 ENSGALG00000013627 58 0.82 - - - - - - - 0.820 - - solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
33. NDST3 22 0.818 - - - - - 0.818 - - - - N-deacetylase and N-sulfotransferase 3, transcript variant X11
34. PPP2R2C ENSGALG00000015531 53 0.816 - - - - - - 0.816 - - - protein phosphatase 2 regulatory subunit Bgamma [Source:HGNC Symbol;Acc:HGNC:9306]
35. TMCO4 ENSGALG00000004081 31 0.814 - - - - - - - 0.814 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
36. GRHL1 ENSGALG00000038495 221 0.813 - - - - - - - - - 0.813 grainyhead like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:17923]
37. FAM126B ENSGALG00000020869 19 0.813 - - - - - - - - - 0.813 family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
38. CHSY3 ENSGALG00000026899 80 0.812 - - - - - - - - - 0.812 chondroitin sulfate synthase 3 [Source:HGNC Symbol;Acc:HGNC:24293]
39. KDM5A ENSGALG00000012986 624 0.81 - - - - - - - 0.810 - - lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
40. ENSGALG00000019522 ENSGALG00000019522 122 0.809 - - - - - - - 0.809 - -
41. DNAI2 ENSGALG00000004495 45 0.808 - - - - - - - 0.808 - - dynein axonemal intermediate chain 2
42. APOPT1 ENSGALG00000044519 193 0.806 - - - - - - - - - 0.806 apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:20492]
43. ZFYVE16 ENSGALG00000015576 287 0.806 - - - - - - - 0.806 - - zinc finger FYVE-type containing 16, transcript variant X3
44. IKZF1 ENSGALG00000013086 58 0.804 - - - - - - - - - 0.804 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
45. FGF7 ENSGALG00000028158 189 0.804 - - - - - - - - - 0.804 fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
46. GINS3 ENSGALG00000031209 32 0.803 - - - - - - - 0.803 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
47. APOAIV APOAIV 5 0.803 - - - - - - - 0.803 - -
48. CCDC96 9 0.803 - - - - - - - 0.803 - - coiled-coil domain containing 96
49. AREG ENSGALG00000010866 16 0.803 - - - - - - - - - 0.803 amphiregulin [Source:NCBI gene;Acc:428752]
50. SDR42E2 ENSGALG00000006964 57 0.803 - - - - - - - 0.803 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
51. ENSGALG00000019053 ENSGALG00000019053 8 0.803 - - - - - - - 0.803 - -
52. GFAP ENSGALG00000000909 21 0.803 - - - - - - - 0.803 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
53. STAB1 21 0.803 - - - - - - - 0.803 - - stabilin 1, transcript variant X2
54. PLB1 PLB1 101 0.803 - - - - - - - 0.803 - -
55. USP53 ENSGALG00000011990 12 0.803 - - - - - - - 0.803 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
56. FOXP4 ENSGALG00000033497 13 0.803 - - - - - - - 0.803 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
57. MVK ENSGALG00000013848 239 0.802 - - - - 0.802 - - - - - mevalonate kinase [Source:HGNC Symbol;Acc:HGNC:7530]
58. CCDC86 ENSGALG00000036935 5280 0.802 - - - - - - - 0.802 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
59. HDAC11 ENSGALG00000005092 176 0.799 - - - - - - - 0.799 - - histone deacetylase 11 [Source:NCBI gene;Acc:415978]
60. KRT20 ENSGALG00000019716 11 0.799 - - - - - - - 0.799 - - keratin 20 [Source:NCBI gene;Acc:420045]
61. CD4 ENSGALG00000014477 19 0.798 - - - - - - - 0.798 - - CD4 molecule [Source:NCBI gene;Acc:395362]
62. ICOS ENSGALG00000008656 27 0.798 - - - - - - - 0.798 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
63. PIK3C2G ENSGALG00000013117 53 0.798 - - - - - - - - - 0.798 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]
64. ZIC3 ENSGALG00000031144 863 0.796 - - - - - - - 0.796 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
65. UTS2RL ENSGALG00000012419 118 0.796 - - - - - - - - - 0.796 urotensin-2 receptor-like
66. MAPT ENSGALG00000000625 659 0.795 - - - - - - - 0.795 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
67. PEAK1 ENSGALG00000002759 39 0.795 - - - - - - - - - 0.795 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
68. INA ENSGALG00000028238 208 0.794 - - - - - - - 0.794 - - internexin neuronal intermediate filament protein alpha
69. ANKRD44 ENSGALG00000007996 17 0.793 - - - - - - - 0.793 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
70. DSC1 ENSGALG00000015140 16 0.793 - - - - - - - 0.793 - - desmocollin 1, transcript variant X1
71. PRSS35 ENSGALG00000015847 52 0.792 - - - - - - - 0.792 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
72. ABCA8 ENSGALG00000021399 11 0.792 - - - - - - - 0.792 - - ATP binding cassette subfamily A member 8
73. PAK2 ENSGALG00000006426 283 0.792 - - - - - - - 0.792 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
74. DCLRE1B ENSGALG00000028626 48 0.791 - - - - - - 0.791 - - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
75. PRLR ENSGALG00000003446 19 0.791 - - - - - - - - - 0.791 prolactin receptor [Source:NCBI gene;Acc:395660]
76. CDCP1 ENSGALG00000040447 47 0.79 - - - - - 0.790 - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
77. KLRD1 ENSGALG00000014722 27 0.79 - - - - - - - 0.790 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
78. IRG1 IRG1 21 0.789 - - - - - - - 0.789 - -
79. USB1 ENSGALG00000035604 4003 0.789 - - - - - 0.789 - - - - U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]
80. KIAA0513 ENSGALG00000025938 46 0.789 - - - - - - - 0.789 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
81. NSUN7 ENSGALG00000014264 4 0.788 - - - - - 0.788 - - - - NOP2/Sun RNA methyltransferase family member 7 [Source:HGNC Symbol;Acc:HGNC:25857]
82. SLC35F5 ENSGALG00000012166 25 0.788 - - - - - 0.788 - - - - solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]
83. ENSGALG00000007846 ENSGALG00000007846 2 0.788 - - - - - 0.788 - - - -
84. ENSGALG00000004619 ENSGALG00000004619 3 0.788 - - - - - 0.788 - - - -
85. PLEKHJ1 ENSGALG00000000835 55 0.788 - - - - - - - - - 0.788 pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
86. SMOX ENSGALG00000015977 18 0.788 - - - - - 0.788 - - - - spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
87. ADAMTS12 55 0.788 - - - - - 0.788 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
88. FTO ENSGALG00000041036 11 0.788 - - - - - 0.788 - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
89. ENSGALG00000006504 ENSGALG00000006504 3 0.788 - - - - - 0.788 - - - -
90. STEAP1 ENSGALG00000009006 16 0.788 - - - - - 0.788 - - - - STEAP family member 1
91. C21orf62 ENSGALG00000040059 5 0.788 - - - - - 0.788 - - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
92. PLCZ1 ENSGALG00000013123 3 0.788 - - - - - 0.788 - - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
93. DZANK1 ENSGALG00000008731 120 0.786 - - - - - - - 0.786 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
94. AQP12 AQP12 11 0.786 - - - - - - - 0.786 - -
95. SMYD1 ENSGALG00000015935 75 0.785 - - - - - - - 0.785 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
96. C12orf43 ENSGALG00000006965 437 0.784 - - - - - - - 0.784 - - chromosome 12 open reading frame 43 [Source:HGNC Symbol;Acc:HGNC:25719]
97. CCDC50 ENSGALG00000020813 739 0.783 - - - - - - - 0.783 - - coiled-coil domain containing 50 [Source:NCBI gene;Acc:424906]
98. MBP ENSGALG00000013640 62 0.783 - - - - - - - 0.783 - - myelin basic protein [Source:NCBI gene;Acc:396217]
99. RIPK4 ENSGALG00000040189 102 0.782 - - - - - - - 0.782 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
100. HAVCR1 ENSGALG00000017362 25 0.782 - - - - - - - 0.782 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]

There are 145 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA