Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NSUN4

Gene Name Gene ID Reads Annotation
NSUN4 ENSGALG00000010360 3567 NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]











Genes with expression patterns similar to NSUN4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NSUN4 ENSGALG00000010360 3567 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
2. PDCD6 ENSGALG00000013400 7611 1.662 - - - - - - 0.710 0.952 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
3. PTK7 ENSGALG00000008609 8081 1.656 - - - - - - 0.700 0.956 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
4. RBM17 ENSGALG00000006332 12656 1.622 - - - - - - 0.773 0.849 - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
5. TAF15 ENSGALG00000002060 12320 1.575 - - - - - - 0.713 0.862 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
6. CSNK2A1 ENSGALG00000006197 41409 0.977 - - - - - - - 0.977 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
7. PDCL3 ENSGALG00000016772 14897 0.967 - - - - - - - 0.967 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
8. STAMBP ENSGALG00000042555 1362 0.963 - - - - - - - 0.963 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
9. GNA12 ENSGALG00000004368 692 0.963 - - - - - - - 0.963 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
10. TMEM69 ENSGALG00000010279 716 0.963 - - - - - - - 0.963 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
11. ENSGALG00000028413 ENSGALG00000028413 551 0.963 - - - - - - - 0.963 - -
12. TDRD1 ENSGALG00000046180 612 0.963 - - - - - - - 0.963 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
13. C9orf89 C9orf89 3056 0.962 - - - - - - - 0.962 - -
14. VEGFC ENSGALG00000010847 2197 0.962 - - - - - - - 0.962 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
15. CREB1 ENSGALG00000008494 2219 0.962 - - - - - - - 0.962 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
16. USP30 ENSGALG00000040265 2000 0.962 - - - - - - - 0.962 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
17. TNFRSF21 ENSGALG00000016719 2762 0.962 - - - - - - - 0.962 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
18. SIN3A ENSGALG00000001644 1141 0.962 - - - - - - - 0.962 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
19. USP42 ENSGALG00000003378 1392 0.962 - - - - - - - 0.962 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
20. PRRX2 ENSGALG00000028236 1990 0.962 - - - - - - - 0.962 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
21. CTU2 4818 0.961 - - - - - - - 0.961 - - cytosolic thiouridylase subunit 2, transcript variant X3
22. RRBP1 ENSGALG00000008676 5376 0.961 - - - - - - - 0.961 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
23. ZNF462 ENSGALG00000015451 12653 0.96 - - - - - - - 0.960 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
24. SLBP ENSGALG00000015712 5586 0.96 - - - - - - - 0.960 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
25. VPS36 ENSGALG00000017026 3658 0.959 - - - - - - - 0.959 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
26. SLC52A3 ENSGALG00000006194 3952 0.959 - - - - - - - 0.959 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
27. ADAR ENSGALG00000021475 6004 0.959 - - - - - - - 0.959 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
28. CWC22 ENSGALG00000009001 5984 0.958 - - - - - - - 0.958 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
29. PHAX ENSGALG00000014691 8114 0.958 - - - - - - - 0.958 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
30. GYG1 ENSGALG00000035535 6311 0.958 - - - - - - - 0.958 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
31. PPAT ENSGALG00000013728 7563 0.958 - - - - - - - 0.958 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
32. FAT1 ENSGALG00000013579 6030 0.957 - - - - - - - 0.957 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
33. INTS2 ENSGALG00000005269 6966 0.956 - - - - - - - 0.956 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
34. LMO7 ENSGALG00000016920 3809 0.954 - - - - - - - 0.954 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
35. KLHDC2 ENSGALG00000012244 12903 0.953 - - - - - - - 0.953 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
36. LAMTOR2 ENSGALG00000029881 35356 0.946 - - - - - - - 0.946 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
37. MAP4K3 ENSGALG00000039720 5124 0.945 - - - - - - - 0.945 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
38. NAA30 ENSGALG00000012098 4681 0.942 - - - - - - - 0.942 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
39. WDFY3 10775 0.937 - - - - - - - 0.937 - - WD repeat and FYVE domain containing 3, transcript variant X7
40. DERL1 ENSGALG00000033950 15074 0.936 - - - - - - - 0.936 - - derlin 1 [Source:NCBI gene;Acc:420350]
41. ACTR6 ENSGALG00000040976 31271 0.926 - - - - - - - 0.926 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
42. SPATA20 ENSGALG00000006857 3506 0.922 - - - - - - - 0.922 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
43. CPSF4 ENSGALG00000004714 14353 0.922 - - - - - - - 0.922 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
44. C11orf57 C11orf57 4971 0.921 - - - - - - - 0.921 - -
45. BMP4 ENSGALG00000012429 4306 0.916 - - - - - - - 0.916 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
46. TIMM23B ENSGALG00000002089 8122 0.914 - - - - - - - 0.914 - - translocase of inner mitochondrial membrane 23 homolog B
47. MCM6 ENSGALG00000012348 12523 0.91 - - - - - - - 0.910 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
48. MYBL2 ENSGALG00000003503 15875 0.9 - - - - - - - 0.900 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
49. MED6 ENSGALG00000029743 9414 0.899 - - - - - - - 0.899 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
50. LAPTM4A ENSGALG00000016479 15973 0.898 - - - - - - - 0.898 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
51. DHCR24 ENSGALG00000010798 3963 0.897 - - - - - - - 0.897 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
52. ZNF367 ENSGALG00000012629 3215 0.895 - - - - - - - 0.895 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
53. RPL7L1 ENSGALG00000011974 20292 0.895 - - - - - - - 0.895 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
54. FARP1 ENSGALG00000016886 13132 0.893 - - - - - - - 0.893 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
55. HSPA12A ENSGALG00000009248 7783 0.886 - - - - - - - 0.886 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
56. THRAP3 ENSGALG00000002144 21958 0.879 - - - - - - - 0.879 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
57. MGST1 ENSGALG00000013098 17632 0.876 - - - - - - - 0.876 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
58. UPF2 ENSGALG00000033772 9548 0.854 - - - - - - - 0.854 - - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
59. TMEM199 ENSGALG00000023757 10781 0.85 - - - - - - - 0.850 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
60. ANP32E ENSGALG00000039891 35925 0.842 - - - - - - - 0.842 - - acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
61. FBXO9 ENSGALG00000016320 9600 0.835 - - - - - - - 0.835 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
62. SETD9 ENSGALG00000014719 5081 0.834 - - - - - - 0.834 - - - SET domain containing 9, transcript variant X2
63. ATP6V0B ENSGALG00000010091 14901 0.83 - - - - - - - 0.830 - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
64. CKAP4 ENSGALG00000012659 36398 0.826 - - - - - - - 0.826 - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
65. NHP2L1 NHP2L1 12124 0.826 - - - - - - 0.826 - - -
66. METAP2 ENSGALG00000011377 16311 0.824 - - - - - - 0.824 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
67. GLO1 ENSGALG00000010127 31662 0.821 - - - - - - - 0.821 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
68. TRA2B ENSGALG00000006531 40566 0.821 - - - - - - - 0.821 - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
69. HOXA9 ENSGALG00000028983 9298 0.819 - - - - - - 0.819 - - - homeobox A9 [Source:NCBI gene;Acc:396096]
70. EIF1 ENSGALG00000028517 124882 0.819 - - - - - - - 0.819 - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
71. GTF2F2 ENSGALG00000016974 7524 0.818 - - - - - - 0.818 - - - general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
72. MAD2L1BP ENSGALG00000027871 7835 0.816 - - - - - - - 0.816 - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
73. GTLF3B GTLF3B 5079 0.815 - - - - - - - 0.815 - -
74. ENSGALG00000020510 ENSGALG00000020510 4037 0.806 - - - - - - 0.806 - - -
75. HOXD4 ENSGALG00000023419 6073 0.805 - - - - - - 0.805 - - - homeobox D4 [Source:NCBI gene;Acc:424139]
76. ARHGEF7 ENSGALG00000031009 10090 0.801 - - - - - - - 0.801 - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
77. PTK2 ENSGALG00000031741 13103 0.8 - - - - - - 0.800 - - - protein tyrosine kinase 2 [Source:NCBI gene;Acc:396416]
78. SFXN5 ENSGALG00000016094 2678 0.799 - - - - - - 0.799 - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
79. UBE2D1 ENSGALG00000021213 5876 0.794 - - - - - - 0.794 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
80. FBXO5 ENSGALG00000013607 6156 0.792 - - - - - - 0.792 - - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
81. UBALD1 ENSGALG00000007619 8536 0.79 - - - - - - 0.790 - - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
82. INTS12 ENSGALG00000010575 2976 0.789 - - - - - - 0.789 - - - integrator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:25067]
83. ATP5MC1 ENSGALG00000001330 37766 0.788 - - - - - - - 0.788 - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
84. EIF5 ENSGALG00000011464 62584 0.785 - - - - - - - 0.785 - - eukaryotic translation initiation factor 5 [Source:NCBI gene;Acc:423479]
85. POLE2 ENSGALG00000012237 9023 0.784 - - - - - - 0.784 - - - DNA polymerase epsilon 2, accessory subunit [Source:NCBI gene;Acc:423567]
86. ASUN ASUN 17129 0.784 - - - - - - 0.784 - - -
87. API5 ENSGALG00000037968 18265 0.779 - - - - - - 0.779 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
88. RAB24 ENSGALG00000002984 6264 0.778 - - - - - - 0.778 - - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
89. POLR2E ENSGALG00000002591 26405 0.778 - - - - - - - 0.778 - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
90. CDK5RAP1 ENSGALG00000006738 2628 0.778 - - - - - - 0.778 - - - CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
91. PROSC 6856 0.777 - - - - - - 0.777 - - - proline synthetase cotranscribed homolog (bacterial), transcript variant X1
92. TMEM183A ENSGALG00000000223 6915 0.777 - - - - - - 0.777 - - - transmembrane protein 183A [Source:NCBI gene;Acc:421156]
93. ATG5 ENSGALG00000015387 7752 0.777 - - - - - - 0.777 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
94. CHMP1B ENSGALG00000040746 4031 0.776 - - - - - - 0.776 - - - charged multivesicular body protein 1B [Source:NCBI gene;Acc:422143]
95. ENSGALG00000021694 ENSGALG00000021694 26011 0.775 - - - - - - - 0.775 - -
96. SF3B3 ENSGALG00000002531 19397 0.773 - - - - - - 0.773 - - - splicing factor 3b subunit 3, transcript variant X2
97. MAP3K7 ENSGALG00000015596 15164 0.772 - - - - - - 0.772 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
98. CSNK2A2 ENSGALG00000031718 9296 0.77 - - - - - - 0.770 - - - casein kinase 2 alpha 2 [Source:NCBI gene;Acc:415626]
99. UBE2R2 ENSGALG00000001668 9234 0.77 - - - - - - 0.770 - - - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
100. TGIF1 ENSGALG00000014795 2378 0.769 - - - - - - 0.769 - - - TGFB induced factor homeobox 1 [Source:NCBI gene;Acc:396339]

There are 154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA