Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NRDE2

Gene Name Gene ID Reads Annotation
NRDE2 ENSGALG00000010677 3453 NRDE-2, necessary for RNA interference, domain containing [Source:HGNC Symbol;Acc:HGNC:20186]











Genes with expression patterns similar to NRDE2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NRDE2 ENSGALG00000010677 3453 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NRDE-2, necessary for RNA interference, domain containing [Source:HGNC Symbol;Acc:HGNC:20186]
2. ALDH3A2 ENSGALG00000004763 3363 1.483 - - - - - - 0.708 - 0.775 - aldehyde dehydrogenase 3 family member A2 [Source:NCBI gene;Acc:417615]
3. FEZ2 ENSGALG00000010594 551 1.483 - - - - - 0.727 - - 0.756 - fasciculation and elongation protein zeta 2 [Source:HGNC Symbol;Acc:HGNC:3660]
4. USP10 ENSGALG00000005674 7768 0.937 - - - - - - - 0.937 - - ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
5. SLCO2B1 ENSGALG00000017302 239 0.87 - - - - - 0.870 - - - - solute carrier organic anion transporter family member 2B1 [Source:HGNC Symbol;Acc:HGNC:10962]
6. PLCZ1 ENSGALG00000013123 3 0.87 - - - - - 0.870 - - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
7. SMOX ENSGALG00000015977 18 0.87 - - - - - 0.870 - - - - spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
8. FTO ENSGALG00000041036 11 0.87 - - - - - 0.870 - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
9. ADAMTS12 55 0.87 - - - - - 0.870 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
10. ENSGALG00000007846 ENSGALG00000007846 2 0.87 - - - - - 0.870 - - - -
11. SLC35F5 ENSGALG00000012166 25 0.87 - - - - - 0.870 - - - - solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]
12. NSUN7 ENSGALG00000014264 4 0.87 - - - - - 0.870 - - - - NOP2/Sun RNA methyltransferase family member 7 [Source:HGNC Symbol;Acc:HGNC:25857]
13. ENSGALG00000004619 ENSGALG00000004619 3 0.87 - - - - - 0.870 - - - -
14. C21orf62 ENSGALG00000040059 5 0.87 - - - - - 0.870 - - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
15. STEAP1 ENSGALG00000009006 16 0.87 - - - - - 0.870 - - - - STEAP family member 1
16. ENSGALG00000006504 ENSGALG00000006504 3 0.87 - - - - - 0.870 - - - -
17. ENSGALG00000020779 ENSGALG00000020779 19 0.869 - - - - - 0.869 - - - -
18. KCNJ15 ENSGALG00000016055 66 0.869 - - - - - 0.869 - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
19. TMEM82 16 0.868 - - - - - 0.868 - - - - transmembrane protein 82, transcript variant X2
20. PTK2B ENSGALG00000016564 406 0.866 - - - - - 0.866 - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
21. PRKCB ENSGALG00000037943 29 0.866 - - - - - 0.866 - - - - protein kinase C beta [Source:HGNC Symbol;Acc:HGNC:9395]
22. HEBP1 ENSGALG00000011798, ENSGALG00000011799 2359 0.866 - - - - - - - - 0.866 - heme binding protein 1 [Source:NCBI gene;Acc:417961]
23. CYR61 ENSGALG00000008661 43 0.863 - - - - - 0.863 - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
24. DNAH5L ENSGALG00000013268 61 0.861 - - - - - 0.861 - - - - dynein axonemal heavy chain 5-like
25. WDR1 ENSGALG00000014957 15700 0.857 - - - - - - - - 0.857 - WD repeat domain 1 [Source:NCBI gene;Acc:422842]
26. SNF8 ENSGALG00000001309 7398 0.854 - - - - - - - 0.854 - - SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:HGNC:17028]
27. STK38 ENSGALG00000000523 44 0.853 - - - - - 0.853 - - - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
28. STOX1 330 0.852 - - - - - - - - 0.852 - storkhead box 1, transcript variant X3
29. PIGG ENSGALG00000015349 314 0.851 - - - - - 0.851 - - - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
30. BSPRY ENSGALG00000008861 98 0.848 - - - - - 0.848 - - - - B-box and SPRY domain containing [Source:HGNC Symbol;Acc:HGNC:18232]
31. DIAPH1 DIAPH1 357 0.846 - - - - - - - - 0.846 -
32. FBXL4 ENSGALG00000015490 12 0.845 - - - - - 0.845 - - - - F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
33. ZNF507 ENSGALG00000004532 78 0.838 - - - - - 0.838 - - - - zinc finger protein 507, transcript variant X2
34. NIPSNAP3L ENSGALG00000027334 7514 0.837 - - - - - - - 0.837 - - nipsnap homolog 3-like
35. FA2H ENSGALG00000002775 396 0.837 - - - - - 0.837 - - - - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
36. ENSGALG00000020283 ENSGALG00000020283 10 0.835 - - - - - 0.835 - - - -
37. CLOCK ENSGALG00000013793 9 0.835 - - - - - 0.835 - - - - clock circadian regulator [Source:NCBI gene;Acc:373991]
38. C4H4ORF29 C4H4ORF29 2442 0.833 - - - - - 0.833 - - - -
39. SOD2 ENSGALG00000011661 13178 0.833 - - - - - - - 0.833 - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
40. ENSGALG00000014946 ENSGALG00000014946 40 0.832 - - - - - - - - 0.832 -
41. CCDC71 ENSGALG00000006787 48 0.832 - - - - - 0.832 - - - - coiled-coil domain containing 71 [Source:HGNC Symbol;Acc:HGNC:25760]
42. BZW1 ENSGALG00000008220 1606 0.83 - - - - - - - - 0.830 - basic leucine zipper and W2 domains 1 [Source:NCBI gene;Acc:424073]
43. ENSGALG00000000193 ENSGALG00000000193 19 0.826 - - - - - 0.826 - - - -
44. FOXRED1 ENSGALG00000046347 4176 0.824 - - - - - 0.824 - - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
45. TMEM183A ENSGALG00000000223 6915 0.823 - - - - - - - 0.823 - - transmembrane protein 183A [Source:NCBI gene;Acc:421156]
46. RAB2A ENSGALG00000015450 990 0.82 - - - - - - - 0.820 - - RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
47. DLG3 ENSGALG00000041900 3016 0.82 - - - - - - - - 0.820 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
48. USB1 ENSGALG00000035604 4003 0.818 - - - - - 0.818 - - - - U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]
49. ENSGALG00000026735 ENSGALG00000026735 5 0.818 - - - - - 0.818 - - - -
50. FNDC3A ENSGALG00000017002 1652 0.816 - - - - - - - - 0.816 - fibronectin type III domain containing 3A [Source:NCBI gene;Acc:418863]
51. SNORA50 SNORA50 9 0.816 - - - - - 0.816 - - - -
52. EX-FABP EX-FABP 516 0.816 - - - - - 0.816 - - - -
53. PPP1R13B ENSGALG00000011548 88 0.814 - - - - - - - - 0.814 - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
54. PTPRN ENSGALG00000033811 454 0.812 - - - - - 0.812 - - - - protein tyrosine phosphatase, receptor type N [Source:HGNC Symbol;Acc:HGNC:9676]
55. MLYCD ENSGALG00000005494 1882 0.812 - - - - - - - 0.812 - - malonyl-CoA decarboxylase [Source:HGNC Symbol;Acc:HGNC:7150]
56. RREB1 ENSGALG00000012799 125 0.811 - - - - - - - - 0.811 - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
57. gga-mir-1466 ENSGALG00000025170 487 0.811 - - - - - - - - 0.811 - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
58. GPSM1 ENSGALG00000001797 943 0.811 - - - - - - - - 0.811 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
59. ZMYM3 ENSGALG00000005533 2927 0.809 - - - - - 0.809 - - - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
60. PCDH20 ENSGALG00000016934 187 0.808 - - - - - - - - 0.808 - protocadherin 20
61. GTF2E1 ENSGALG00000042320 7712 0.807 - - - - - - - 0.807 - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
62. RNF149 ENSGALG00000016779 172 0.806 - - - - - 0.806 - - - - ring finger protein 149 [Source:HGNC Symbol;Acc:HGNC:23137]
63. GEM ENSGALG00000032506 439 0.805 - - - - - - - - 0.805 - GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
64. COL6A2 ENSGALG00000039216 892 0.805 - - - - - - - - 0.805 - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
65. DGKB ENSGALG00000033561 170 0.805 - - - - - 0.805 - - - - diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
66. C6orf163 ENSGALG00000028653 39 0.804 - - - - - 0.804 - - - - chromosome 6 open reading frame 163 [Source:HGNC Symbol;Acc:HGNC:21403]
67. C1GALT1 ENSGALG00000009752 7148 0.803 - - - - - - - - 0.803 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
68. RBP4 ENSGALG00000015374 122 0.803 - - - - - 0.803 - - - - retinol binding protein 4 [Source:NCBI gene;Acc:396454]
69. TDRD7 ENSGALG00000012350 594 0.803 - - - - - - - - 0.803 - tudor domain containing 7 [Source:NCBI gene;Acc:430492]
70. RNF213 ENSGALG00000039269 7 0.802 - - - - - 0.802 - - - - ring finger protein 213 [Source:HGNC Symbol;Acc:HGNC:14539]
71. EIF2B3 ENSGALG00000010140 7992 0.801 - - - - - - - 0.801 - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
72. CEP135 ENSGALG00000013776 232 0.8 - - - - - 0.800 - - - - centrosomal protein 135 [Source:HGNC Symbol;Acc:HGNC:29086]
73. NDST3 22 0.8 - - - - - 0.800 - - - - N-deacetylase and N-sulfotransferase 3, transcript variant X11
74. STX7 ENSGALG00000034374 4695 0.799 - - - - - - - 0.799 - - syntaxin 7 [Source:NCBI gene;Acc:426930]
75. DOCK10 ENSGALG00000005030 848 0.799 - - - - - 0.799 - - - - dedicator of cytokinesis 10 [Source:HGNC Symbol;Acc:HGNC:23479]
76. RPS6KA5 ENSGALG00000030580 218 0.798 - - - - - - - - 0.798 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
77. GNA11 ENSGALG00000003238 732 0.798 - - - - - - - - 0.798 - G protein subunit alpha 11 [Source:NCBI gene;Acc:374077]
78. GP1BB ENSGALG00000021529 348 0.797 - - - - - 0.797 - - - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
79. CHRNB2 ENSGALG00000002707 15 0.795 - - - - - 0.795 - - - - cholinergic receptor nicotinic beta 2 subunit [Source:NCBI gene;Acc:395605]
80. PJA2 ENSGALG00000000264 1574 0.795 - - - - - - - - 0.795 - praja ring finger ubiquitin ligase 2, transcript variant X1
81. PIGB ENSGALG00000037734 2193 0.793 - - - - - - - - 0.793 - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
82. CC2D1B ENSGALG00000010619 66 0.793 - - - - - 0.793 - - - - coiled-coil and C2 domain containing 1B [Source:HGNC Symbol;Acc:HGNC:29386]
83. CEP70 ENSGALG00000012087 7992 0.792 - - - - - - - - 0.792 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
84. TMEM69 ENSGALG00000010279 716 0.792 - - - - - - - - 0.792 - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
85. FER1L6 ENSGALG00000033783 196 0.791 - - - - - 0.791 - - - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
86. PKP2 ENSGALG00000012913 2547 0.79 - - - - - - - - 0.790 - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
87. LCORL ENSGALG00000014421 116 0.788 - - - - - 0.788 - - - - ligand dependent nuclear receptor corepressor like [Source:NCBI gene;Acc:422820]
88. TTPA ENSGALG00000030031 500 0.787 - - - - - - - - 0.787 - alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
89. NPNT ENSGALG00000043555 3002 0.786 - - - - - - - - 0.786 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
90. VTI1A ENSGALG00000008880 279 0.784 - - - - - - - - 0.784 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
91. CCNY ENSGALG00000007076 3921 0.784 - - - - - - - - 0.784 - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
92. BSDC1 ENSGALG00000003405 3701 0.784 - - - - - - - - 0.784 - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
93. TMEM177 ENSGALG00000011593 311 0.784 - - - - - - - - 0.784 - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
94. NUP62 ENSGALG00000004856 5799 0.784 - - - - - - - 0.784 - - nucleoporin 62
95. FAM129A ENSGALG00000004812 269 0.783 - - - - - - - - 0.783 - family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
96. LRRC16A LRRC16A 2041 0.783 - - - - - - - - 0.783 -
97. AHSA2 1504 0.782 - - - - - - - - 0.782 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
98. SERPINB6 ENSGALG00000012866 1582 0.782 - - - - - - - - 0.782 - serpin family B member 6 [Source:NCBI gene;Acc:420895]
99. DOPEY1 279 0.782 - - - - - 0.782 - - - - dopey family member 1, transcript variant X8
100. KIAA0922 4430 0.781 - - - - - 0.781 - - - - KIAA0922, transcript variant X4

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA