Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NPM3

Gene Name Gene ID Reads Annotation
NPM3 ENSGALG00000032329 21138 nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]











Genes with expression patterns similar to NPM3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NPM3 ENSGALG00000032329 21138 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
2. TCF15 ENSGALG00000026276 3646 2.321 - - 0.753 - - 0.835 - - 0.733 - transcription factor 15 [Source:NCBI gene;Acc:395788]
3. POLDIP2 ENSGALG00000003211 11664 1.634 - - - - - - 0.773 0.861 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
4. TCEA2 ENSGALG00000005976 9143 1.608 - - - - - - 0.745 0.863 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
5. NKX-6.2 NKX-6.2 1370 1.594 - - - - - 0.741 - 0.853 - -
6. MEOX2 ENSGALG00000010794 1556 1.534 - - - - - 0.789 - - 0.745 - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
7. NHP2L1 NHP2L1 12124 1.47 - - - - - 0.701 0.769 - - -
8. PRPF4 ENSGALG00000008857 4001 1.455 - - - - - - 0.755 0.700 - - pre-mRNA processing factor 4 [Source:HGNC Symbol;Acc:HGNC:17349]
9. C1QTNF3 ENSGALG00000027887 8646 1.444 - - - - - 0.731 - - 0.713 - C1q and tumor necrosis factor related protein 3, transcript variant X1
10. TYW3 ENSGALG00000032549 4869 0.944 - - - - - - - 0.944 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
11. NID2 ENSGALG00000012394 6717 0.944 - - - - - - - 0.944 - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
12. RAP1A ENSGALG00000001476 5287 0.934 - - - - - - - 0.934 - - RAP1A, member of RAS oncogene family
13. ENSGALG00000020092 ENSGALG00000020092 3067 0.926 - - - - - - - 0.926 - -
14. MBNL2 ENSGALG00000016890 3162 0.924 - - - - - - - 0.924 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
15. MRPL28 ENSGALG00000007473 19134 0.918 - - - - - - - 0.918 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
16. NPEPL1 ENSGALG00000007533 5908 0.916 - - - - - - - 0.916 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
17. RABL5 RABL5 5264 0.916 - - - - - - - 0.916 - -
18. ASPM ENSGALG00000032398 12784 0.913 - - - - - - - 0.913 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
19. CLINT1 ENSGALG00000003702 11269 0.911 - - - - - - - 0.911 - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
20. FABP5 ENSGALG00000041344 3984 0.887 - - - - - 0.887 - - - - fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
21. FGD5 ENSGALG00000008546 4031 0.886 - - - - - - - 0.886 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
22. THOC2 ENSGALG00000008507 9501 0.883 - - - - - - - 0.883 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
23. NGFR ENSGALG00000035950 13452 0.88 - - - - - 0.880 - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
24. GFRA4 ENSGALG00000036589 2733 0.877 - - - - - 0.877 - - - - GDNF family receptor alpha 4 [Source:NCBI gene;Acc:395839]
25. TAF12 ENSGALG00000000991 8709 0.874 - - - - - - - 0.874 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
26. TARS ENSGALG00000003288 12702 0.873 - - - - - - - 0.873 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
27. FGD3 ENSGALG00000005237 4410 0.869 - - - - - - - 0.869 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
28. ITCH ENSGALG00000040474 2646 0.868 - - - - - - - 0.868 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
29. SRP9 ENSGALG00000026009 12418 0.868 - - - - - - - 0.868 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
30. MAP4K5 ENSGALG00000012321 3036 0.867 - - - - - - - 0.867 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
31. VPS26A ENSGALG00000004174 9198 0.866 - - - - - - - 0.866 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
32. ENSGALG00000005615 ENSGALG00000005615 4354 0.866 - - - - - - - 0.866 - -
33. FNTA ENSGALG00000015397 3741 0.866 - - - - - - - 0.866 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
34. UBE2Q2 3861 0.865 - - - - - - - 0.865 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
35. EMC1 ENSGALG00000003969 6876 0.864 - - - - - - - 0.864 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
36. POLR2C ENSGALG00000001168 10703 0.862 - - - - - - - 0.862 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
37. DLGAP4 ENSGALG00000001046 6872 0.862 - - - - - - - 0.862 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
38. TBCE ENSGALG00000013950 3076 0.861 - - - - - - - 0.861 - - tubulin folding cofactor E
39. CABLES1 ENSGALG00000014998 1636 0.861 - - - - - - - 0.861 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
40. LIPA ENSGALG00000006378 4414 0.861 - - - - - - - 0.861 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
41. MRPL10 ENSGALG00000014387 12386 0.861 - - - - - - - 0.861 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
42. C2CD2 ENSGALG00000016148 2734 0.86 - - - - - - - 0.860 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
43. CHST2 ENSGALG00000034507 6172 0.86 - - - - - - - 0.860 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
44. UTP23 ENSGALG00000032400 3601 0.859 - - - - - - - 0.859 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
45. WDR82 ENSGALG00000025904 4783 0.859 - - - - - - - 0.859 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
46. CAPRIN2 1473 0.859 - - - - - - - 0.859 - - caprin family member 2, transcript variant X7
47. UBE2J2 ENSGALG00000001848 6527 0.858 - - - - - - - 0.858 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
48. NR3C2 ENSGALG00000010035 603 0.858 - - - - - - - 0.858 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
49. WNK2 ENSGALG00000038850 4712 0.858 - - - - - - - 0.858 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
50. GNE ENSGALG00000015331 1577 0.858 - - - - - - - 0.858 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
51. GNB1L ENSGALG00000001925 1981 0.858 - - - - - - - 0.858 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
52. PAM16 9684 0.857 - - - - - - - 0.857 - - presequence translocase associated motor 16 homolog, transcript variant X2
53. HIP1R ENSGALG00000031511 1981 0.857 - - - - - - - 0.857 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
54. WDR45B ENSGALG00000001563 5870 0.857 - - - - - - - 0.857 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
55. SERPINF1 ENSGALG00000003015 5123 0.857 - - - - - 0.857 - - - - serpin family F member 1 [Source:NCBI gene;Acc:417561]
56. ENSGALG00000001591 ENSGALG00000001591 784 0.857 - - - - - - - 0.857 - -
57. VASH1 ENSGALG00000043036 1235 0.857 - - - - - - - 0.857 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
58. KPNA4 ENSGALG00000009549 3674 0.857 - - - - - - - 0.857 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
59. AARSD1 ENSGALG00000002880 3068 0.856 - - - - - - - 0.856 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
60. AKR1B10L3 ENSGALG00000019284 5869 0.856 - - - - - - - 0.856 - - aldo-keto reductase family 1 member B10-like 3
61. SEMA3F ENSGALG00000029621 2079 0.856 - - - - - - - 0.856 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
62. CDC73 ENSGALG00000002469 4586 0.855 - - - - - - - 0.855 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
63. EXOSC1 ENSGALG00000039917 5259 0.855 - - - - - - - 0.855 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
64. HVCN1 ENSGALG00000004562 2550 0.854 - - - - - - - 0.854 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
65. C1orf21 ENSGALG00000020922 4035 0.854 - - - - - - - 0.854 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
66. SLX4 ENSGALG00000031841 1208 0.854 - - - - - - - 0.854 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
67. FTSJ2 FTSJ2 2951 0.854 - - - - - - - 0.854 - -
68. SETD2 ENSGALG00000042051 2981 0.854 - - - - - - - 0.854 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
69. SLC26A8 ENSGALG00000040498 253 0.854 - - - - - - - 0.854 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
70. C5orf63 C5orf63 3718 0.853 - - - - - - - 0.853 - -
71. TLN2 2295 0.853 - - - - - - - 0.853 - - talin 2, transcript variant X5
72. RASGEF1B 2014 0.852 - - - - - - - 0.852 - - RasGEF domain family member 1B, transcript variant X8
73. FPGT ENSGALG00000026958 788 0.852 - - - - - - - 0.852 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
74. NCS1 ENSGALG00000012710 1104 0.852 - - - - - - - 0.852 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
75. TOR1B TOR1B 197 0.851 - - - - - - - 0.851 - -
76. CAPN9 158 0.85 - - - - - - - 0.850 - - calpain 9
77. LOC420160 ENSGALG00000004252 188 0.85 - - - - - - - 0.850 - - cathepsin L1-like, transcript variant X3
78. METTL6 ENSGALG00000040665 4467 0.85 - - - - - - - 0.850 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
79. YTHDF3 ENSGALG00000039774 170 0.85 - - - - - - - 0.850 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
80. SRPK2 ENSGALG00000008154 7385 0.85 - - - - - - - 0.850 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
81. CXorf23 1582 0.849 - - - - - - - 0.849 - - chromosome X open reading frame 23, transcript variant X3
82. PLA2G7 ENSGALG00000016713 2100 0.849 - - - - - - - 0.849 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
83. LUC7L3 ENSGALG00000007386 11944 0.844 - - - - - - - 0.844 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
84. PCDH1 ENSGALG00000002553 2938 0.843 - - - - - - - 0.843 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
85. HMOX1 ENSGALG00000012550 1186 0.841 - - - - - - - 0.841 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
86. CTSA ENSGALG00000006876 5380 0.838 - - - - - - - 0.838 - - cathepsin A [Source:NCBI gene;Acc:428163]
87. MRPL19 ENSGALG00000016731 22670 0.837 - - - - - - - 0.837 - - mitochondrial ribosomal protein L19, transcript variant X1
88. PHF20L1 ENSGALG00000033205 7598 0.832 - - - - - - - 0.832 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
89. CPEB2 ENSGALG00000014516 1187 0.831 - - - - - - - 0.831 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
90. APPBP2 ENSGALG00000005314 6447 0.83 - - - - - - - 0.830 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
91. AIF1L ENSGALG00000029834 13866 0.83 - - - - - 0.830 - - - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
92. TNRC6A ENSGALG00000006068 9166 0.83 - - - - - - - 0.830 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
93. MOB4 ENSGALG00000008128 10322 0.829 - - - - - - - 0.829 - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
94. GPHN ENSGALG00000009587 3045 0.829 - - - - - - - 0.829 - - gephyrin [Source:NCBI gene;Acc:428878]
95. C10orf11 C10orf11 3087 0.828 - - - - - - - 0.828 - -
96. HIPK3 ENSGALG00000011695 6842 0.814 - - - - - - - 0.814 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
97. CRIP1 ENSGALG00000002771 4270 0.814 - - - - - 0.814 - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
98. TSPAN5 ENSGALG00000012227 8703 0.811 - - - - - - 0.811 - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
99. CCT8 ENSGALG00000015821 12161 0.811 - - - - - - - 0.811 - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
100. TMSB4X ENSGALG00000026383 293046 0.811 - - - - - 0.811 - - - - Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]

There are 259 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA