Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NPM1

Gene Name Gene ID Reads Annotation
NPM1 ENSGALG00000002197 24109 nucleophosmin [Source:NCBI gene;Acc:396203]











Genes with expression patterns similar to NPM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NPM1 ENSGALG00000002197 24109 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleophosmin [Source:NCBI gene;Acc:396203]
2. CNTRL ENSGALG00000001513 1773 1.565 - - 0.826 0.739 - - - - - - centriolin [Source:NCBI gene;Acc:417121]
3. gga-mir-762 ENSGALG00000025437 24823 1.544 - - 0.801 - - - - - 0.743 - gga-mir-762 [Source:miRBase;Acc:MI0008209]
4. TRUB1 ENSGALG00000009091 1005 1.526 - - 0.726 - - - - - 0.800 - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
5. KLC1 ENSGALG00000011528 1621 1.509 - - - - - - - - 0.772 0.737 kinesin light chain 1, transcript variant X6
6. CCNI ENSGALG00000011457 3203 1.494 - - 0.776 - - - - - - 0.718 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
7. SMC5 ENSGALG00000015118 1799 1.459 - - 0.736 0.723 - - - - - - structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
8. KCTD10 ENSGALG00000005138 1191 1.451 - - 0.709 - - - - 0.742 - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
9. MIB1 ENSGALG00000014974 3583 1.441 - - 0.724 - - - - - 0.717 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
10. HINT3 ENSGALG00000044342 5674 1.433 - - 0.724 0.709 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
11. ENSGALG00000004132 ENSGALG00000004132 9287 1.427 - - - 0.711 - - - 0.716 - -
12. ACAD9 ENSGALG00000005034 22100 0.978 - - - - - - - 0.978 - - acyl-CoA dehydrogenase family member 9 [Source:NCBI gene;Acc:415974]
13. TTLL12 ENSGALG00000014167 714 0.855 - - - - - - - - 0.855 - tubulin tyrosine ligase like 12 [Source:NCBI gene;Acc:418227]
14. MBSP MBSP 5634 0.843 - - 0.843 - - - - - - -
15. CASKIN1 604 0.843 - - - - - - - - 0.843 - CASK interacting protein 1, transcript variant X4
16. gga-mir-1306 ENSGALG00000025271 1231 0.842 - - - - - - - - 0.842 - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
17. LMNB2 ENSGALG00000000470 4364 0.837 - - 0.837 - - - - - - - lamin B2 [Source:NCBI gene;Acc:396222]
18. DEF8 ENSGALG00000025712 790 0.834 - - - - - - - - 0.834 - differentially expressed in FDCP 8 homolog [Source:HGNC Symbol;Acc:HGNC:25969]
19. MRGBP ENSGALG00000005531 79 0.834 - - - - - - - - 0.834 - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
20. CHD9 ENSGALG00000039178 1168 0.827 - - 0.827 - - - - - - - chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
21. CGNL1 ENSGALG00000004294 1177 0.827 - - 0.827 - - - - - - - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
22. ZC3HAV1 ENSGALG00000013911 162 0.826 - - - - - - - - 0.826 - zinc finger CCCH-type containing, antiviral 1 [Source:NCBI gene;Acc:426315]
23. SP3 ENSGALG00000031796 8997 0.826 - - 0.826 - - - - - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
24. SNORD38 SNORD38 537 0.826 - - - - - - - - 0.826 -
25. TPM4 ENSGALG00000002563 15621 0.824 - - 0.824 - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
26. COL24A1 ENSGALG00000006864 161 0.824 - - - - - - - - 0.824 - collagen type XXIV alpha 1 chain, transcript variant X4
27. FLII ENSGALG00000004997 623 0.822 - - - - - - - - 0.822 - FLII, actin remodeling protein [Source:NCBI gene;Acc:416515]
28. NCKAP5 ENSGALG00000012177, ENSGALG00000045368 266 0.819 - - - - - - - - 0.819 - NCK associated protein 5, transcript variant X8
29. FAM19A4 ENSGALG00000042228 1724 0.816 - - - - - - - - 0.816 - family with sequence similarity 19 member A4, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21591]
30. DYNC2H1 ENSGALG00000041814 1770 0.813 - - - - - - - - 0.813 - dynein cytoplasmic 2 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2962]
31. ARID3A ENSGALG00000026231 867 0.812 - - 0.812 - - - - - - - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
32. TIAR TIAR 2471 0.808 - - 0.808 - - - - - - -
33. WHSC1 1712 0.808 - - 0.808 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
34. TUBGCP3 ENSGALG00000016836 332 0.807 - - 0.807 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
35. ABCE1 ENSGALG00000009961 958 0.806 - - 0.806 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
36. SLK ENSGALG00000008318 2220 0.805 - - 0.805 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
37. NAF1 ENSGALG00000009496 2003 0.805 - - - - - - - - 0.805 - nuclear assembly factor 1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:25126]
38. ENSGALG00000004931 ENSGALG00000004931 2737 0.805 - - 0.805 - - - - - - -
39. BBX ENSGALG00000015353 1281 0.805 - - 0.805 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
40. PLIN3 ENSGALG00000044632 370 0.804 - - - - - - - - 0.804 - perilipin 3, transcript variant X2
41. SEPHS1 ENSGALG00000014575 10701 0.803 - - 0.803 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
42. YBX3 ENSGALG00000031890 819 0.802 - - 0.802 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
43. PRPF38B ENSGALG00000001972 2009 0.801 - - 0.801 - - - - - - - pre-mRNA processing factor 38B
44. PTPN2 ENSGALG00000013867 1128 0.8 - - 0.800 - - - - - - - protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
45. TFAP2C ENSGALG00000007690 768 0.798 - - 0.798 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
46. SLC37A3 ENSGALG00000012849 836 0.798 - - 0.798 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
47. RBM25 ENSGALG00000009332 10842 0.797 - - 0.797 - - - - - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
48. PCDH17 ENSGALG00000016941 1006 0.797 - - 0.797 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
49. TPD52 ENSGALG00000040167 9891 0.795 - - 0.795 - - - - - - - tumor protein D52 [Source:NCBI gene;Acc:770339]
50. ATP8B4 ENSGALG00000002326 456 0.793 - - 0.793 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
51. TMOD3 ENSGALG00000004710 2820 0.793 - - 0.793 - - - - - - - tropomodulin 3 [Source:NCBI gene;Acc:415421]
52. BRD1 ENSGALG00000029379 6047 0.792 - - - - - - - - 0.792 - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
53. URM1 ENSGALG00000004971 17880 0.792 - - 0.792 - - - - - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
54. ERCC3 ENSGALG00000011515 3133 0.792 - - 0.792 - - - - - - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
55. MYCBP2 ENSGALG00000016915 2374 0.792 - - 0.792 - - - - - - - MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
56. CPSF3 ENSGALG00000016424 342 0.791 - - 0.791 - - - - - - - cleavage and polyadenylation specific factor 3 [Source:HGNC Symbol;Acc:HGNC:2326]
57. NEMF ENSGALG00000012263 2250 0.79 - - 0.790 - - - - - - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
58. BTG1L ENSGALG00000004676 2293 0.79 - - 0.790 - - - - - - - protein BTG1-like
59. FAR-1 FAR-1 1855 0.788 - - 0.788 - - - - - - -
60. ABCC3 ENSGALG00000007522 340 0.787 - - 0.787 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
61. GUCY1A3 718 0.787 - - - - - - - - 0.787 - guanylate cyclase 1 soluble subunit alpha, transcript variant X2
62. HAS2 ENSGALG00000029596 4192 0.787 - - - - - - - - 0.787 - hyaluronan synthase 2 [Source:NCBI gene;Acc:395594]
63. TOP2A ENSGALG00000003922 7726 0.786 - - 0.786 - - - - - - - topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]
64. GSDMA ENSGALG00000013495 1650 0.785 - - 0.785 - - - - - - - gasdermin A [Source:NCBI gene;Acc:426132]
65. NXPE3 ENSGALG00000015344 111 0.784 - - 0.784 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
66. TWSG1 ENSGALG00000008400 1869 0.784 - - 0.784 - - - - - - - twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
67. EMP1 ENSGALG00000011803 351 0.784 - - 0.784 - - - - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
68. SMARCAD1 ENSGALG00000037339 149 0.784 - - 0.784 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
69. OSGIN2 ENSGALG00000042840 83 0.783 - - 0.783 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
70. WAPAL WAPAL 625 0.783 - - 0.783 - - - - - - -
71. RECQL ENSGALG00000013174 1323 0.783 - - 0.783 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
72. NGF ENSGALG00000002556 122 0.783 - - 0.783 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
73. ITM2B ENSGALG00000016996 1112 0.783 - - 0.783 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
74. NDUFB1 ENSGALG00000028537 2059 0.782 - - 0.782 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
75. C18orf8 C18orf8 1512 0.782 - - 0.782 - - - - - - -
76. ZNF618 ENSGALG00000008886 1326 0.782 - - - - - - - - 0.782 - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
77. MLLT3 ENSGALG00000015078 502 0.782 - - 0.782 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
78. SURF6 ENSGALG00000038413 11178 0.781 - - 0.781 - - - - - - - surfeit 6 [Source:NCBI gene;Acc:417160]
79. CDC5L ENSGALG00000016704 22893 0.781 - - 0.781 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
80. MAPRE3 ENSGALG00000031726 191 0.78 - - 0.780 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
81. SZT2 ENSGALG00000028561 255 0.78 - - 0.780 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
82. LBR 6686 0.779 - - 0.779 - - - - - - - lamin B receptor, transcript variant X4
83. LXR LXR 2599 0.779 - - 0.779 - - - - - - -
84. SLC3A1 ENSGALG00000009973 608 0.779 - - 0.779 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
85. L3MBTL3 ENSGALG00000034030 113 0.779 - - 0.779 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
86. PTDSS2 ENSGALG00000004300 682 0.779 - - 0.779 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
87. MTHFSD ENSGALG00000033322 824 0.779 - - 0.779 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
88. RAD54L2 ENSGALG00000003243 187 0.778 - - 0.778 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
89. TMEM242 ENSGALG00000013689 377 0.778 - - 0.778 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
90. CLN5 ENSGALG00000016917 386 0.778 - - - - - - - - 0.778 - CLN5, intracellular trafficking protein [Source:NCBI gene;Acc:101752092]
91. KCTD3 ENSGALG00000009678 335 0.778 - - 0.778 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
92. CHAMP1 ENSGALG00000016813 508 0.778 - - 0.778 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
93. GON4L ENSGALG00000014643 1737 0.777 - - 0.777 - - - - - - - gon-4 like, transcript variant X2
94. ADK ENSGALG00000005057 199 0.776 - - 0.776 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
95. ENSGALG00000008689 ENSGALG00000008689 232 0.776 - - 0.776 - - - - - - -
96. U4 U4 69 0.776 - - 0.776 - - - - - - -
97. NUAK1 ENSGALG00000012662 411 0.776 - - - - - - - - 0.776 - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
98. CLEC16A ENSGALG00000007167 66 0.776 - - 0.776 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
99. DBN1 ENSGALG00000033405 216 0.776 - - 0.776 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
100. THOC2 ENSGALG00000008507 9501 0.776 - - 0.776 - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]

There are 334 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA