Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NPHP3

Gene Name Gene ID Reads Annotation
NPHP3 ENSGALG00000034586 1465 nephrocystin 3, transcript variant X1











Genes with expression patterns similar to NPHP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NPHP3 ENSGALG00000034586 1465 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nephrocystin 3, transcript variant X1
2. BFAR ENSGALG00000003111 1778 1.973 - - - - - - 0.986 0.987 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
3. RGCC ENSGALG00000016954 1282 1.937 - - - - - - 0.938 0.999 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
4. BPTF ENSGALG00000038222 7521 1.859 - - - - - - 0.932 0.927 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
5. RPA1 ENSGALG00000003072 8023 1.857 - - - - - - 0.939 0.918 - - replication protein A1 [Source:NCBI gene;Acc:417563]
6. AP3S1 ENSGALG00000002341 12388 1.808 - - - - - - 0.849 0.959 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
7. SF3A3 ENSGALG00000001540 9664 1.653 - - - - - - 0.892 0.761 - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
8. KIF15 ENSGALG00000036645 9946 1.634 - - - - - - 0.904 0.730 - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
9. LONRF2 ENSGALG00000016768 193 0.999 - - - - - - - 0.999 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
10. PIGG ENSGALG00000015349 314 0.999 - - - - - - - 0.999 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
11. AP1S2 ENSGALG00000016551 421 0.999 - - - - - - - 0.999 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
12. MSANTD1 ENSGALG00000015628 154 0.999 - - - - - - - 0.999 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
13. MSC ENSGALG00000037777 1109 0.999 - - - - - - - 0.999 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
14. CTTN ENSGALG00000007700 709 0.999 - - - - - - - 0.999 - - cortactin [Source:NCBI gene;Acc:396455]
15. CCM2 ENSGALG00000005612 323 0.999 - - - - - - - 0.999 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
16. GOLGA1 ENSGALG00000001025 334 0.999 - - - - - - - 0.999 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
17. HES5 ENSGALG00000001141 6514 0.998 - - - - - - - 0.998 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
18. ACSBG2 ENSGALG00000001749 1681 0.998 - - - - - - - 0.998 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
19. MAN2A2 ENSGALG00000033790 2717 0.998 - - - - - - - 0.998 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
20. APC ENSGALG00000000220 1266 0.998 - - - - - - - 0.998 - - APC, WNT signaling pathway regulator, transcript variant X12
21. SLC16A2 ENSGALG00000007748 446 0.998 - - - - - - - 0.998 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
22. C3H6ORF154 C3H6ORF154 1078 0.998 - - - - - - - 0.998 - -
23. SLC38A11 ENSGALG00000011052 386 0.998 - - - - - - - 0.998 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
24. IRF2BPL ENSGALG00000041616 2835 0.998 - - - - - - - 0.998 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
25. TBC1D32 ENSGALG00000014876 681 0.997 - - - - - - - 0.997 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
26. ENSGALG00000012564 ENSGALG00000012564 426 0.997 - - - - - - - 0.997 - -
27. CA9 ENSGALG00000021340 1431 0.996 - - - - - - - 0.996 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
28. ITPR1 ENSGALG00000008294 1226 0.996 - - - - - - - 0.996 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
29. TMF1 ENSGALG00000013408 3344 0.995 - - - - - - - 0.995 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
30. RAB35 ENSGALG00000007308 6300 0.995 - - - - - - - 0.995 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
31. KIAA1191 ENSGALG00000003370 2599 0.995 - - - - - - - 0.995 - - KIAA1191 [Source:NCBI gene;Acc:416230]
32. OXSR1 ENSGALG00000005979 2905 0.995 - - - - - - - 0.995 - - oxidative stress responsive 1
33. EIF2A ENSGALG00000010401 2201 0.995 - - - - - - - 0.995 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
34. USP54 ENSGALG00000005232 2749 0.995 - - - - - - - 0.995 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
35. USP25 ENSGALG00000015693 2567 0.995 - - - - - - - 0.995 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
36. POPDC3 ENSGALG00000027420 700 0.995 - - - - - - 0.995 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
37. UBAC1 ENSGALG00000042564 598 0.994 - - - - - - 0.994 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
38. RPP38 ENSGALG00000008794 1057 0.994 - - - - - - - 0.994 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
39. RAB9A ENSGALG00000016579 3262 0.994 - - - - - - - 0.994 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
40. SLC1A1 ENSGALG00000010187 637 0.993 - - - - - - 0.993 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
41. ENSGALG00000002923 ENSGALG00000002923 2233 0.993 - - - - - - 0.993 - - -
42. SDCCAG8 ENSGALG00000010713 311 0.993 - - - - - - 0.993 - - - serologically defined colon cancer antigen 8, transcript variant X5
43. BCAS1 ENSGALG00000007796 379 0.992 - - - - - - 0.992 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
44. GCC2 ENSGALG00000016806 1085 0.992 - - - - - - 0.992 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
45. CAMKK2 ENSGALG00000040131 2795 0.992 - - - - - - 0.992 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
46. KLHL29 ENSGALG00000016495 582 0.992 - - - - - - 0.992 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
47. MTFMT ENSGALG00000007353 805 0.992 - - - - - - 0.992 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
48. LPAR1 ENSGALG00000015729 3874 0.991 - - - - - - - 0.991 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
49. HSBP1 ENSGALG00000043039 2365 0.991 - - - - - - - 0.991 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
50. CETN2 ENSGALG00000007510 1688 0.991 - - - - - - 0.991 - - - centrin 2 [Source:NCBI gene;Acc:422303]
51. ATG13 ENSGALG00000008347 7374 0.991 - - - - - - - 0.991 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
52. BET1 ENSGALG00000024485 2451 0.99 - - - - - - - 0.990 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
53. TATDN1 ENSGALG00000041072 1585 0.99 - - - - - - - 0.990 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
54. IRAK2 ENSGALG00000008407 5934 0.99 - - - - - - 0.990 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
55. DFFA ENSGALG00000002820 2046 0.99 - - - - - - - 0.990 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
56. HACE1 ENSGALG00000015415 1194 0.989 - - - - - - 0.989 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
57. TMEM135 2283 0.989 - - - - - - - 0.989 - - transmembrane protein 135, transcript variant X4
58. UTP20 ENSGALG00000011643 3012 0.989 - - - - - - - 0.989 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
59. SREBF2 ENSGALG00000041687 4519 0.988 - - - - - - 0.988 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
60. HSD17B2 ENSGALG00000005467 275 0.988 - - - - - - - 0.988 - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
61. DNAJA3 ENSGALG00000007821 3963 0.988 - - - - - - 0.988 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
62. WDFY1 ENSGALG00000005158 2512 0.988 - - - - - - - 0.988 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
63. PNO1 ENSGALG00000009093 11153 0.987 - - - - - - 0.987 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
64. FBXO28 ENSGALG00000009331 2871 0.987 - - - - - - - 0.987 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
65. SHQ1 ENSGALG00000007798 1982 0.987 - - - - - - 0.987 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
66. AKAP7 ENSGALG00000029794 3287 0.986 - - - - - - 0.986 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
67. JARID2 ENSGALG00000012702 4280 0.986 - - - - - - - 0.986 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
68. AK6 ENSGALG00000020534 4791 0.985 - - - - - - 0.985 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
69. NDUFB8 ENSGALG00000005704 5781 0.985 - - - - - - 0.985 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
70. LMNB2 ENSGALG00000000470 4364 0.985 - - - - - - 0.985 - - - lamin B2 [Source:NCBI gene;Acc:396222]
71. RRN3 ENSGALG00000041989 3934 0.985 - - - - - - 0.985 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
72. CLCN3 ENSGALG00000009674 3704 0.984 - - - - - - 0.984 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
73. gga-mir-6643 ENSGALG00000027935 4442 0.984 - - - - - - 0.984 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
74. TMEM168 ENSGALG00000009443 2452 0.984 - - - - - - - 0.984 - - transmembrane protein 168, transcript variant X1
75. MOB2 ENSGALG00000030499 3658 0.984 - - - - - - 0.984 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
76. ATN1 ENSGALG00000014554 3270 0.984 - - - - - - 0.984 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
77. KLF5 ENSGALG00000016927 1080 0.984 - - - - - - - 0.984 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
78. UBR2 ENSGALG00000009906 7717 0.983 - - - - - - - 0.983 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
79. INTS10 ENSGALG00000010130 6320 0.982 - - - - - - 0.982 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
80. MOB1B ENSGALG00000011573 567 0.982 - - - - - - 0.982 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
81. ARHGAP29 ENSGALG00000005683 3622 0.982 - - - - - - 0.982 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
82. ABCD3 ENSGALG00000005647 4844 0.982 - - - - - - 0.982 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
83. LEPROTL1 ENSGALG00000024482 4251 0.981 - - - - - - 0.981 - - - leptin receptor overlapping transcript-like 1
84. MSRA ENSGALG00000028032 2607 0.981 - - - - - - 0.981 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
85. MAP1LC3A ENSGALG00000038721 2230 0.981 - - - - - - 0.981 - - - microtubule associated protein 1 light chain 3 alpha
86. GCN1L1 GCN1L1 4601 0.98 - - - - - - - 0.980 - -
87. TBCCD1 ENSGALG00000006566 2696 0.98 - - - - - - 0.980 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
88. DISP1 3281 0.98 - - - - - - 0.980 - - - dispatched RND transporter family member 1, transcript variant X3
89. OSR2 ENSGALG00000037695 2010 0.98 - - - - - - - 0.980 - - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
90. AFAP1L2 ENSGALG00000008999 1305 0.979 - - - - - - - 0.979 - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
91. POLR3E ENSGALG00000007008 4010 0.979 - - - - - - 0.979 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
92. MGAT4B ENSGALG00000005924 2663 0.979 - - - - - - - 0.979 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
93. MED6 ENSGALG00000029743 9414 0.977 - - - - - - 0.977 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
94. METTL11A METTL11A 11876 0.977 - - - - - - 0.977 - - -
95. COPG2 ENSGALG00000008144 4542 0.976 - - - - - - - 0.976 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
96. MYST2 MYST2 8078 0.975 - - - - - - 0.975 - - -
97. SFRP2 ENSGALG00000009241 4716 0.975 - - - - - - - 0.975 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
98. EIF4G3 ENSGALG00000010084 5881 0.975 - - - - - - 0.975 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
99. AP2B1 ENSGALG00000042125 13229 0.974 - - - - - - 0.974 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
100. CDC23 ENSGALG00000007610 11945 0.972 - - - - - - - 0.972 - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]

There are 205 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA