Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NPC1

Gene Name Gene ID Reads Annotation
NPC1 ENSGALG00000015030 1302 NPC intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7897]











Genes with expression patterns similar to NPC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NPC1 ENSGALG00000015030 1302 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NPC intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7897]
2. INPP5E ENSGALG00000001964 3580 0.866 - - - - 0.866 - - - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
3. B3GAT2 ENSGALG00000031590 615 0.862 - - - - 0.862 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
4. DUS2 856 0.86 - - - - 0.860 - - - - - dihydrouridine synthase 2, transcript variant X2
5. C11H19ORF12 C11H19ORF12 5149 0.848 - - - - 0.848 - - - - -
6. GKAP1 ENSGALG00000012586 2908 0.846 - - - - 0.846 - - - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
7. OFD1 ENSGALG00000016576 1916 0.845 - - - - 0.845 - - - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
8. NAT9 ENSGALG00000007723 2098 0.843 - - - - 0.843 - - - - - N-acetyltransferase 9 (putative), transcript variant X7
9. SCAF4 ENSGALG00000033965 2027 0.842 - - - - 0.842 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
10. SNRNP35 ENSGALG00000003318 1253 0.836 - - - - 0.836 - - - - - small nuclear ribonucleoprotein U11/U12 subunit 35 [Source:NCBI gene;Acc:416823]
11. CSPP1 1756 0.834 - - - - 0.834 - - - - - centrosome and spindle pole associated protein 1
12. RIOK3 ENSGALG00000015004 4249 0.833 - - - - 0.833 - - - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
13. RAD51A RAD51A 2132 0.833 - - - - 0.833 - - - - -
14. PAQR8 ENSGALG00000016675 85 0.831 - - - - 0.831 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
15. STON2 ENSGALG00000010579 76 0.828 - - - - 0.828 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
16. NPY7R ENSGALG00000021303 215 0.827 - - - - - - - - - 0.827 neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
17. MED18 ENSGALG00000028149 2684 0.826 - - - - 0.826 - - - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
18. SRSF4 1200 0.825 - - - - 0.825 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
19. GRSF1 2406 0.825 - - - - - - - - - 0.825 G-rich RNA sequence binding factor 1, transcript variant X2
20. ASTE1 ENSGALG00000036171 155 0.823 - - - - 0.823 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
21. PPWD1 ENSGALG00000014756 1118 0.823 - - - - 0.823 - - - - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:28954]
22. CCDC6 ENSGALG00000003165 93 0.82 - - - - 0.820 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
23. PPTC7 ENSGALG00000004550 154 0.818 - - - - 0.818 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
24. PRKCDBP PRKCDBP 2249 0.816 - - - - - - - - - 0.816
25. ENSGALG00000006865 ENSGALG00000006865 307 0.816 - - - - 0.816 - - - - -
26. GLT8D1 ENSGALG00000001642 4232 0.816 - - - - 0.816 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
27. KCNC4 ENSGALG00000000400 129 0.815 - - - - 0.815 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
28. GGA.10540 GGA.10540 3324 0.814 - - - - 0.814 - - - - -
29. RNF126 ENSGALG00000042948 4724 0.814 - - - - 0.814 - - - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
30. C8H1ORF27 C8H1ORF27 516 0.813 - - - - - - - - - 0.813
31. CECR1 336 0.812 - - - - 0.812 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
32. CLIC3 ENSGALG00000038789 233 0.812 - - - - 0.812 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
33. PLEKHB1 ENSGALG00000017321 443 0.812 - - - - 0.812 - - - - - pleckstrin homology domain containing B1 [Source:NCBI gene;Acc:419064]
34. FAM171B ENSGALG00000002646 837 0.81 - - - - 0.810 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
35. MOCS3 ENSGALG00000007986 308 0.81 - - - - 0.810 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
36. SDF2L1 ENSGALG00000031982 6084 0.805 - - - - - - - 0.805 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
37. LRRFIP2 ENSGALG00000033102 8250 0.804 - - - - - - - - - 0.804 LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
38. SPSB3 ENSGALG00000002285 1329 0.803 - - - - 0.803 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
39. KCNB1 ENSGALG00000004758 620 0.803 - - - - 0.803 - - - - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
40. MRPL2 ENSGALG00000008597 16500 0.802 - - - - 0.802 - - - - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
41. UTP18 ENSGALG00000002985 7129 0.802 - - - - 0.802 - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
42. SCARB2 ENSGALG00000011499 2763 0.8 - - - - 0.800 - - - - - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
43. PRMT10 PRMT10 1169 0.799 - - - - 0.799 - - - - -
44. BBX ENSGALG00000015353 1281 0.797 - - - - 0.797 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
45. CNN2 ENSGALG00000027777 512 0.796 - - - - 0.796 - - - - - calponin 2 [Source:NCBI gene;Acc:100216000]
46. MOSPD1 ENSGALG00000006132 8503 0.796 - - - - 0.796 - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
47. CANT1 ENSGALG00000011822 2218 0.795 - - - - 0.795 - - - - - calcium activated nucleotidase 1 [Source:NCBI gene;Acc:430103]
48. ENSGALG00000001346 ENSGALG00000001346 233 0.794 - - - - 0.794 - - - - -
49. GALK2 ENSGALG00000036201 1016 0.794 - - - - - - - - - 0.794 galactokinase 2 [Source:NCBI gene;Acc:415596]
50. ABCD2 ENSGALG00000042554 1607 0.794 - - - - 0.794 - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
51. CLCN3 ENSGALG00000009674 3704 0.794 - - - - - - - - - 0.794 chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
52. DPP7 ENSGALG00000038145 4888 0.793 - - - - 0.793 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
53. PMEPA1 ENSGALG00000037780 349 0.792 - - - - - - - - - 0.792 prostate transmembrane protein, androgen induced 1 [Source:NCBI gene;Acc:428166]
54. SULT1E1 ENSGALG00000011812 70 0.79 - - - - - - - - - 0.790 sulfotransferase family 1E member 1
55. GLTPD1 GLTPD1 2968 0.79 - - - - 0.790 - - - - -
56. CADM3 ENSGALG00000036925 1753 0.788 - - - - 0.788 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
57. CEP44 ENSGALG00000020201 1060 0.787 - - - - 0.787 - - - - - centrosomal protein 44 [Source:HGNC Symbol;Acc:HGNC:29356]
58. C1orf50 ENSGALG00000004800 4894 0.787 - - - - 0.787 - - - - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
59. AASDHPPT ENSGALG00000027981 1017 0.786 - - - - 0.786 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
60. PPP1CC ENSGALG00000004571 14748 0.785 - - - - 0.785 - - - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
61. CAMLG ENSGALG00000006411 662 0.785 - - - - 0.785 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
62. C10orf54 C10orf54 2444 0.784 - - - - - - - - - 0.784
63. FAM177A1 ENSGALG00000010046 4318 0.783 - - - - - - - 0.783 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
64. ELOVL1 ENSGALG00000009988 4000 0.782 - - - - 0.782 - - - - - ELOVL fatty acid elongase 1 [Source:NCBI gene;Acc:424564]
65. GPR158 ENSGALG00000007667 111 0.782 - - - - 0.782 - - - - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
66. SCYL2 ENSGALG00000011569 920 0.781 - - - - 0.781 - - - - - SCY1 like pseudokinase 2 [Source:NCBI gene;Acc:417930]
67. PHF5A ENSGALG00000011953 2395 0.781 - - - - - - - - - 0.781 PHD finger protein 5A [Source:NCBI gene;Acc:417991]
68. TAC1 ENSGALG00000009737 2211 0.78 - - - - 0.780 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
69. CAPN5 ENSGALG00000040478 2414 0.78 - - - - 0.780 - - - - - calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]
70. TMEM41B ENSGALG00000005815 2049 0.779 - - - - - - 0.779 - - - transmembrane protein 41B [Source:NCBI gene;Acc:423047]
71. CCDC102A ENSGALG00000029999 324 0.779 - - - - 0.779 - - - - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
72. FARS2 ENSGALG00000042481 1182 0.779 - - - - - - - - - 0.779 phenylalanyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21062]
73. CMTM3 ENSGALG00000000424 393 0.778 - - - - 0.778 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
74. TPGS2 ENSGALG00000026547 1967 0.775 - - - - 0.775 - - - - - tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24561]
75. CDC16 ENSGALG00000016816 2162 0.775 - - - - 0.775 - - - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
76. TEF ENSGALG00000011958 375 0.775 - - - - 0.775 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
77. U2SURP ENSGALG00000002612 4255 0.774 - - - - 0.774 - - - - - U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
78. PXDC1 ENSGALG00000012814 1163 0.774 - - - - 0.774 - - - - - PX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21361]
79. KIAA1407 KIAA1407 252 0.774 - - - - 0.774 - - - - -
80. ENSGALG00000022967 ENSGALG00000022967 240 0.773 - - - - 0.773 - - - - -
81. LRRC6 ENSGALG00000042548 227 0.773 - - - - 0.773 - - - - - leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]
82. CCDC107 ENSGALG00000021897 1223 0.772 - - - - 0.772 - - - - - coiled-coil domain containing 107
83. ENSGALG00000001591 ENSGALG00000001591 784 0.77 - - - - 0.770 - - - - -
84. ZNF385D ENSGALG00000011283 2578 0.77 - - - - 0.770 - - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
85. NMB ENSGALG00000043506 1387 0.77 - - - - 0.770 - - - - - neuromedin B [Source:NCBI gene;Acc:415333]
86. SCFD1 ENSGALG00000009916 5756 0.769 - - - - 0.769 - - - - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
87. FIBIN ENSGALG00000023904 3350 0.768 - - - - - - - 0.768 - - fin bud initiation factor homolog [Source:NCBI gene;Acc:426933]
88. STIL ENSGALG00000010478 1398 0.766 - - - - 0.766 - - - - - STIL, centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]
89. MED7 ENSGALG00000003870 4244 0.766 - - - - 0.766 - - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
90. ST6GALNAC4 ENSGALG00000005063 1056 0.765 - - - - 0.765 - - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:NCBI gene;Acc:395182]
91. NEK3 ENSGALG00000017024 696 0.765 - - - - 0.765 - - - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
92. FAM183A 242 0.763 - - - - 0.763 - - - - - family with sequence similarity 183 member A, transcript variant 2
93. CCDC88A ENSGALG00000043587 2208 0.763 - - - - 0.763 - - - - - coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
94. KIFC3 ENSGALG00000043034 802 0.761 - - - - 0.761 - - - - - kinesin family member C3 [Source:HGNC Symbol;Acc:HGNC:6326]
95. STK39 ENSGALG00000010930 1708 0.761 - - - - - - - 0.761 - - serine/threonine kinase 39 [Source:HGNC Symbol;Acc:HGNC:17717]
96. APTX ENSGALG00000001954 692 0.76 - - - - 0.760 - - - - - aprataxin [Source:NCBI gene;Acc:395173]
97. ZNF800 ENSGALG00000033997 415 0.759 - - - - - - - - - 0.759 zinc finger protein 800 [Source:NCBI gene;Acc:417747]
98. C26H6ORF89 C26H6ORF89 1826 0.759 - - - - 0.759 - - - - -
99. DNAJC17 ENSGALG00000036432 2828 0.757 - - - - 0.757 - - - - - DnaJ heat shock protein family (Hsp40) member C17 [Source:NCBI gene;Acc:770519]
100. GEMIN6 ENSGALG00000013821 5589 0.757 - - - - - - - 0.757 - - gem nuclear organelle associated protein 6 [Source:NCBI gene;Acc:426266]

There are 129 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA